cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
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General information
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RAP - Accession No.
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AK069612
Link to RAP-DB
(
IRGSP 1.0
)
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RAP ID
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Os01g0772600
(
IRGSP 1.0
)
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RAP - Chromosome No.
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1
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RAP - Location, Length
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34,345,375 -
34,352,381
( + )
;
7,007(bp)
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Exon (Data source : RAP-DB)
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Exon 1
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Location |
34,345,375 -
34,345,533
( + )
;
159 (bp)
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Exon 2
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Location |
34,346,133 -
34,346,601
( + )
;
469 (bp)
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|
Exon 3
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Location |
34,347,685 -
34,347,810
( + )
;
126 (bp)
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Exon 4
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Location |
34,347,900 -
34,347,973
( + )
;
74 (bp)
|
|
Exon 5
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Location |
34,348,367 -
34,348,436
( + )
;
70 (bp)
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Exon 6
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Location |
34,348,511 -
34,348,566
( + )
;
56 (bp)
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|
Exon 7
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Location |
34,348,659 -
34,348,730
( + )
;
72 (bp)
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Exon 8
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Location |
34,348,807 -
34,348,901
( + )
;
95 (bp)
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|
Exon 9
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Location |
34,349,083 -
34,349,149
( + )
;
67 (bp)
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|
Exon 10
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Location |
34,349,232 -
34,349,361
( + )
;
130 (bp)
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Exon 11
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Location |
34,349,558 -
34,349,773
( + )
;
216 (bp)
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Exon 12
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Location |
34,349,884 -
34,350,014
( + )
;
131 (bp)
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Exon 13
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Location |
34,350,467 -
34,350,641
( + )
;
175 (bp)
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Exon 14
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Location |
34,350,715 -
34,350,805
( + )
;
91 (bp)
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Exon 15
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Location |
34,351,076 -
34,351,233
( + )
;
158 (bp)
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Exon 16
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Location |
34,351,482 -
34,351,670
( + )
;
189 (bp)
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Exon 17
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Location |
34,351,811 -
34,352,381
( + )
;
571 (bp)
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Chromosome: 1
, position: 34,345,375
- 34,352,381
bp
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Now loading
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Sequence (Data source : RAP-DB)
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Nucleotide
Fasta Format
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000001 agacagcgtc tctcggttcg ggcctcagcg ggcggtgtgt gtgtgtgcgc ctccgcgaga
000061 ccagacacca acctctctct ctctctctct cccatccttc ccctcctcct cctccgcctc
000121 gccgccgccg ccacacgccg cacggtctct ctccccgagg taactagcct tgcacgcctg
000181 gacttcttcc cctctcctcc ttcccgtcgt cgtcctccct ctatccggag ggtctctcgg
000241 gggacgccgc gttcgtgggc tgggctgtct ccatgtcggt ggcggcggcg gcgtgggggg
000301 acgcgggcga tcgtcggcgc ggggcccgat cttagagtcc gtcgcgtccg atcgcgcggc
000361 gatcgttccg gcgcgcgccg atctccccgt ttcggcggcg gaaattcggg gttgctgctc
000421 gtgtttcatc ggttggtgtt ggttcgggct acggttttcc tgggacgatc gggggggcgc
000481 cgatgatttg gcgagatgta tgcgttcgtt aagcccgatt tttgatcggt tttggttggg
000541 aaaatcagtg tcggggagat cgggatagga tttggggcgg acgggttgtg gaaaccactg
000601 ttggcaaatc tgatggcaca gtctgccgtg attttttttt tggctggaga tgtgatatgg
000661 ttaggagttg atgggtctgc tattagatgt gaaatcatca gttggtttac tcaaccttat
000721 cagtgttagt ttattctaat ccacatgttt ttgagcagta taaatgcagg attaatccgt
000781 ggtgttgtga ctttttgggt ggtagattcg tgggcggcag gaagtgcatg gggagaaagg
000841 atgccagagt tgcgtagtgg agtccggcaa gctcggttga aggcaaagaa ggttgaggac
000901 cttgcagcac aggacccagc tgagaacttg gtagtggtgg caccgacggt ggcaggaaga
000961 cgtggtagag gaaggggtgg gaggggtgga ggtagagcaa caggaagagg aagggcagga
001021 ggaagagggc gaggtgttcc ggtgattgat ttggacccgg accaaccttg tgaggttctt
001081 ccaggagctg ctattggcgg agtcgctgct ggaggccccc atcatatcga ggaacttgct
001141 aataaggttg tgaagatgga tggtgggagt gctgagaaga ttggtggagg cgaagatgat
001201 gggaatgcat ctccagttcc ggataaggta tattcttcat attgagctct tactaattta
001261 ttatgcatgt tatcacttgc atgcatttct cctgttattc tgattgcaga catgcactgt
001321 tagggtttcg gagatgacga caaattagta gattttggcc tggtaccaca agtgtaccgt
001381 tatatcatat tacgatatta tgtcgttatg tgcatggttc aggtggacca agcttttttc
001441 tttacgtaga tattggtaac gccttttgga acttattaaa tgcataaaat aattgacctg
001501 ataacaagca taacagcacc ttccttactc taccattttt gtttttggca ttgtttgtag
001561 ggcaaggcag gtgcccctat ttatgttcta ttcagaaatg tttccacttt tttctatgga
001621 tgcttccttg tcaatgatgc tagcttgaag tttttgatag tacatagccg tagaatggga
001681 tggttgacct caccgaattc atgagggcat ctccttatct gttaccgtgc gaatgccagt
001741 gcacatggct gctctgcatc cctcaactta ggcttactgt ttgcttatat catggaagct
001801 gttcttttac aacatagttg atctaagacc taatatagtt gtccccaaat ctagtttgga
001861 tgccactgtg gagtttgtgc aatagcttgg cgtcattagg ttcttcaaac ttatagacat
001921 ggatctgtgc atggcaaata actttgacct tttgatacaa aatcaacttt aggttccatg
001981 aacatcatct agtcttcgag tgctctaaat ctggagtctt aggaggtcac tttcttgcct
002041 agcaataaac cactccataa attgcatcgg ttataactaa tcctttttca ttgcaaatat
002101 tcatctctat ctcaaatggc aggcatttct gagagtcacg ctctgcttga aaggagtgca
002161 aaaaaaatgt tagtgcatga taggatactt gaatctgtca tgacttttac tagaatacgg
002221 tttgtttgag tgtcatctgg cacaatattg ttttacacta tgatgagttg gagatttggt
002281 tacctagtaa agtcgatgaa tcatttgcag gttcaagtag gccattctcc gcaatacaag
002341 gtagagcgga agttggggaa aggtggtttt ggacaggttt atgttggcag aagggtttct
002401 ggtggaactg atcgcactgg agctgatgct atcgaggtct aaccccatcc tttttccttt
002461 tcttttaaaa agtttctgct ataatatcac atggtggtga taatagatgg attctcatat
002521 tgcaggtagc tttgaaattc gagcaccgca acagtaaggg ttgcaattat ggccctccat
002581 atgagtggca agtttatagg taattgcact ataataagtt gagtattaca atcttagaga
002641 taggatctca gagactcgga cataataaaa gttattgtgc aatatcttga ttcttgcctg
002701 aaaatgttgt ttctattttg catattacaa ggactattta tctcttggat ccaagaattt
002761 gttattagtt gcatgaagtt ttgcacatta acctgaacta gcaaacattt aatgcttagt
002821 atgttacagc aatgttttct gctgattata attgtagact agcttatttc ctctatcttt
002881 gaacatttag ttatttggag ttatctgttg aagggtaccg tagtactgta gtgccactac
002941 ttactacttc gagaaccaac cttactattt gtgcgttttg catgtgtttc agtgctctga
003001 atggatgtta tggtataccc tgggttcact acaaaggccg gcagggggac tattatgttc
003061 tggtcagtcg tataagcatt ttctaattgt ttgagattct tttcttaaca actgctaaaa
003121 tttgtaacct tttcaggtaa tggacatact aggacctagt ctttgggatg tttggaattc
003181 tgttgggcag acgtaagatt gttgtggcct gattgctttt ttgtcccctc agtaatattt
003241 gttgttaaag acagcaacta agtgataacc aatgtttcat gcaggatgac cccaagtatg
003301 gttgcttgca tcgctgtaga ggcaatttct atccttgaga aacttcatgc aaaggggtaa
003361 gcaggccttt tgaattttct attagcctct ggatttcact gttcatgttt tatttttgga
003421 acattttacc aggttcgttc atggagatgt taaaccagaa aattttctac ttggccaacc
003481 tggatcacct gatgagaaga aacttttttt gattgatctt ggcttaggta tgcaatggaa
003541 accttatgtg attgatactg gttgcaaaaa ttgagcacat aacccatctc aataagattt
003601 aacattccct aatcagaatt gcggatgttc ttttgtaatg ctgtttgtac ctaatatcat
003661 tgtaaaatgt gagttcacaa gtgctcatgc taccatttac aatttcagca tctaaatgga
003721 aggaaacgcc aaatggacag catgttgatt atgatcaaag gccagacata tttaggttaa
003781 tttttatctg atgacttttt ttggttatat tttttgcaac tttcctccat atttatcatc
003841 tgccttcttt tggacagggg tacaataaga tatgctagtg tccatgccca tttaggccgt
003901 actggtagca gaagggatga tctggaatca ttagcatata cattaatatt tcttctcaga
003961 ggaaggttac cttggcaagg ctaccaggtt tccattcttt ctctggacat ttggttatac
004021 ctgatgtact atgtgttatg ttcatttgca tattgagtga aggtttttgg ttcttccttt
004081 tgtttgtttc caatagattc agtgataacg atagtttatc tgtgatatgt tctttcttgc
004141 tcactgattt tgtatataac ttgatctgtc atgtttattg cagggtgaga acaagagttt
004201 tcttgtttgc aagaagaaaa tggctacctc tccagacctt ttgtgctgtt tctgtccccc
004261 tccttttaaa cttttcctgg agagcgtgac aaacatgaga tttgatgaag aaccaaacta
004321 cgcaaagctt atttcccttt ttgatgaatt gattgagccc cagcatttga ggcctattag
004381 aatcgatggt gctctaaagg ttattttaca tcagaaattt tttttcttca tattacagta
004441 tcagctagtc aatccaccca attttaatat aattcacatg atttgacatt gaatggtttc
004501 tatatgcagg ctggacaaaa acgtggaagg ttgcttgtaa atcttgaaga agatgaacaa
004561 ccaaagaaga aagttcgact tggaagccca gcaaatcagt ggatatcagt ctataatgct
004621 aggagaccca tgaaacaaag gtaacaaact ttgacctttg catgcttgtt gtaatcttca
004681 ttttcacagt gagctcaact atatgaccgt attttgtgat gtatgacgtg aagtttgatc
004741 cacaaatagt ctgaagtcac gtgcgattca tagttgtact caactccttg gtgcggtgct
004801 tatgccgtga taattttttg tcgtccatgt caaggtttag tatatgccag tcagccagtc
004861 tacaacttga cctcatttaa tttattcaaa gcaatgcttt atgtatctaa tttgccaaca
004921 gaccattact gctttggtat tttgaactgg gaactgcagc taagcatgct atattgttat
004981 taacagtttc ttagtcaaaa atcaaaagaa tatacaactt gggtcactgt gtggcttgag
005041 cttcaaaata ccttttcaat aacgtccttg tttccctttt ttttatcaac agataccatt
005101 acaatgtagc agatgccaga cttcatcaac acatagagaa gggaaatgat gatggattgt
005161 tcattagctc agtggcatct tcagccaatc tttgggccct tattatggac gcgggaactg
005221 ggttcacatc ccaagtttat gaactctcac caatatttct tcataaggta ctcttactct
005281 tgagcaaaga ttccctcttt tctctggagc gttctgagtt gcctattctt gtacttttag
005341 gattggatta tggagcaatg ggagaataat tactacatca gtgccatagc gggtgcaaca
005401 aatggaagtt ccttggtggt catgtcaaaa ggtttgtctc agctgttctt ttgttggagg
005461 tctctcatgt tactaccatt gttattcttc ataaaggacc atctatgttt agaaacttgg
005521 cctgtttctc tttccattca cttcgcaggt gtctcaattt ttttttggga agatggttga
005581 tatgtcctga tgtagtgatg tgtatatatt gacttgcatg ttccacacac ttagtgtttc
005641 ttttgtttat gtattatgac atgaatgggg ttagtctgac atggtgattt actctttcca
005701 ggaactcctt acactcaaca gtcttacaaa gttagtgaat cgtttccctt caaatggatc
005761 aacaagaaat ggaaagaagg atttcatgtt acatcaatga ccactgcagg aagccgctgg
005821 ggtgtagtta tgtcaaggaa ttctggattt tctgaacagg tatttgtggt tattggtgta
005881 atattttttt ttcctggtgt gcaaatcagt tgcaatctaa gcgatggtat ttcaattttt
005941 tttttggcat gtgaaaaagg gtacaaaact ctttagttgt cagaaaataa cttgttttca
006001 gatgaaatga gttgtcgtat tgatggaaac cagtcttttt gaacctgaca gggattctta
006061 catcatatat caagttgatt atacttcatc tctctcatgt actgcaggta gtagaattgg
006121 attttttata tcctagtgaa ggtatccacc ggcgttggga gaatggctat agaataactt
006181 ctacagcagc cactggtgac caagctgctt ttatattgag tatacccaag agaaaattga
006241 tggacgagac acaagaaact cttagaacat ctgcttttcc aagcaaccat gtgaaggtac
006301 gaatacatga ctaattcctg tgtacattgt ttttcttcac agttctctct aaccagacca
006361 ttcaacttac atttcttgtt caagcgtcaa ctcgatcact actctaacct tgtcccatac
006421 tgttgtcttt ttgtaggaga aatgggccaa gaatctttac attgcttcga tatgctatgg
006481 ccggacagta tcttgaggca taccctgcac accaactcgg gcttagcata ttcgcaactg
006541 agttgatgtc gggaaaacca gcaatctagt tgctgctctc tgttactctg tatgtgtagg
006601 taacattggc taggtaaacc ttacatcatg gccagagtta ggggcgcgag aggaagcagg
006661 gaggaaggtg gatggacagc taataagctg atgaggatgt catccggctg gtggtctggt
006721 ggaggtggca gaagcggatg ccgtcaacat attttgcatc aagatgtgct ttgctgcagt
006781 ccttgctgcg gtgcacagca cggatgaccc ttatagcctc tttggaggcc tataatctga
006841 gagcccgttg tgtatagctc ttatcgtgtc ctgcgttttg tctggtggaa gcgaaattac
006901 catgtttcca gaactccgga attgtctcta aattattgtg tgagaatggg tgtactgata
006961 aatcggtgta tcgattccat tattcgatgg tctcattgca ttaatgc
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Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.
Update info.
