cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA
General information
RAP - Accession No. AK103675     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os04g0599800 ( IRGSP 1.0 )
RAP - Chromosome No. 4
RAP - Location, Length 30,766,999 -  30,769,873  ( + ) ;   2,875(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 30,766,999 -  30,767,698 ( + ) ;   700 (bp)
Exon 2 Location 30,767,785 -  30,768,057 ( + ) ;   273 (bp)
Exon 3 Location 30,768,184 -  30,768,453 ( + ) ;   270 (bp)
Exon 4 Location 30,768,549 -  30,769,873 ( + ) ;   1,325 (bp)

Related Rice IDs
RAP Locus RAP ID KOME
Clone ID		 KOME
Clone Name		 KOME
Cluster ID		 MSU ID cDNA
Accession No		 RiceXPro
FeatureNum		 Genomic Nucleotide
Accession No		 Genomic
Nucleotide GI		 Genomic Protein
Accession No		 Genomic
Protein GI		 RefSeq Genomic
Nucleotide
Accession No		 RefSeq Genomic
Nucleotide GI		 RefSeq RNA
Nucleotide
Accession No		 RefSeq RNA
Nucleotide GI		 RefSeq Genomic Protein
Accession No		 RefSeq Genomic
Protein GI
Os04g0599800 Os04t0599800-01 214530 J033136B14 15071 LOC_Os04g51110.1 AK103675 1974 AP008210.2 255675107 BAF15668.1 113565325 NC_008397.2 297603645 NM_001060289.1 115460307 NP_001053754.1 115460308
Os04g0599800 Os04t0599800-01 214530 J033136B14 15071 LOC_Os04g51110.2 AK103675 1974 AP008210.2 255675107 BAF15668.1 113565325 NC_008397.2 297603645 NM_001060289.1 115460307 NP_001053754.1 115460308


Chromosome: 4 ,  position: 30,766,999 - 30,769,873 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format 
000001 acaaggatac tactccgcga ggcacctctc tctctctctc tgtgagtttc gtgcgatctc 
000061 gcgagcgaat ccggcgcgcg acccaggctc tccaagatcc ccgcgctctc ctcttcggtt 
000121 tactgatctg aaatctctgc gtcgaatcac ctgtttgttg gcttgaattg cttgtccgcg 
000181 tcgttgattt cgttgtggtt tcttgatctt cggtggaatt tctttgcgtt ggattgtctc 
000241 cacccctgtt ggtttcttgt cgattcccga tttgagttgt tcgttggcgt gaaaaggatt 
000301 ctttttttcc cctgagattt cttgattttt ggtgaaattt ctttggtgtt gaaatatcat 
000361 cgccttttgg tttcttatcg attccgtcgt tccgattgga gttgttcgtc ggcgtgaatt 
000421 tttttttcct gattcatcgt tgcttgttga ttggggatcg aatttttcgt ctacgatcca 
000481 tcttattcgt ggtagcagta tctcttcttg ttgctgcgct gtgccctgtt tatttgtttc 
000541 tgcttgttgc ttctgaccca tggatgcagg ttcgcactcg atctcatcgg agaagagcag 
000601 ccggtacgtg gcgccgcgac agccactcca ggaggccgga tccagaccgt acatgccatc 
000661 gctgagcacg gcgtcccgca acccgtcagc caagtgctac gtgagttctc tgttctaagc 
000721 gtcgccaagg aacgcacaca agctgttcga cgaaatgact gaacgggtat tctccttgtt 
000781 tggcagggtg acaggtttat tccggacagg tcggcgatgg acatggacat ggcgcactac 
000841 ctgctgacgg agccgaggaa ggacaaggag aacgcggcgg cgtccccggc caaggaggcg 
000901 taccggaagc tgctggccga gaagatcctc aacaaccgca ccaggattct ctccttccgc 
000961 aacaagccgc cagagcccga gagcatcctc acggagctcc gtgctgatgc ggcttccatc 
001021 caagccaagc cggcgaagca gcgccgatac attcctcagg tatgcacacc tggttctagt 
001081 ctagtgttca ttgctgccat ttagctgtaa ctgtctagtg cctttggatt atggttggtt 
001141 gctgattgcc tgattggatg tgcgctggtt gaaaatcttg tgcagtctgc cgagaggact 
001201 ctggatgctc cagagcttgt tgatgattac tacctcaacc tactggactg gggaagcagc 
001261 aatgtgctat ccattgcgct gggcaactcg gtgtacctct gggatgccac gaacagttca 
001321 acttctgagc ttgttaccgt cgatgaggac aatggccctg tcaccagcgt aagctgggct 
001381 cctgatggcc ggcacatcgc cgttggtctc aactcctccg atgtccagct ctgggacacc 
001441 agctcaaacc gactggttag tacttagtac ctcttggtct gtgtttgaat gttttcatta 
001501 gcattgcatg tgcagttgtg cttagttcct gattgtgatt gattctgcag ctgaggacga 
001561 tgcgaggcgt gcacgattcg agggtcggtt cgctggcatg gaacaacaac atcctcacaa 
001621 ctggtggaat ggatggcaag attgtgaaca atgatgtgag gatcaggaac catgttgtgc 
001681 agacatacca ggggcatcag caggaggtgt gtggcctcaa gtggtcagga tcagggcagc 
001741 agcttgccag tggtggcaat gacaacctcc tgcacatatg ggatgtgtcc atggcatcct 
001801 ctatgccgtc tgctggccgc acccagtggt tacacaggct tgaggatcac ttggctgctg 
001861 tgaaggctct cgcgtggtgc ccattccaga gcaacctgct ggcatctggt ggtggtggga 
001921 gtgaccggtg catcaagttc tggaacacac ataccggcgc atgcctcaac tcgatcgaca 
001981 ctgggtcaca agtgtgctcg ctggtctgga acaagaatga gagagagctg ctaagctcac 
002041 atggattcgc tcagaatcag ctcactttgt ggaagtaccc gtcaatggtt aagatggctg 
002101 aactcactgg ccatacctct cgtgtccttt tcacggctca ggttatcttt tgctccttgt 
002161 acctgccgtt taaattgaca aatattgctc tgaacagatt gctgattact tgtcttgtgg 
002221 taatcttgca gagccctgat ggtctcacag tagcatctgc tgcagcagat gagaccctga 
002281 gattctggaa cgtatttggg gctcctgaag cacccaagac tgcaaccaag ggttcccaca 
002341 ctgggatgtt caacaattcc aaccacattc acatccgttg aggaacacag taagtactac 
002401 cttcatctgt atttccctag cgcttctaca cattacacag tatcaatgtg atgtccaaaa 
002461 gctgcatgca tatctattaa ctacaagtag ctcattgtgc tgttttgctc tatgcatctt 
002521 tgcagatacc cttggttctg tgatccagtc ataacttaca aagaagcaga cttggtgtga 
002581 agggtcattt gcaggagaga tcatcttaca ttattagcag aagagttaga ttttgacatg 
002641 ttgtatataa ggttttgtgc tatgttgata acaattttat gtacatcaag accggtttga 
002701 tgtattgatt ggcgtagaaa aaatgtaaaa aaattgcttt tctgccagta atatacattt 
002761 ttatatactt gccaggcttt tcttgtagta agttcctctc gttgtgtagt aacttgtaat 
002821 ttgattgatt ttactctcga gccaattgag atgtctggta accaggaaat tgctg

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Barley ESTs
Acc. No. Clone Name Length
AV833396 bags7p21 545
more... (Total Hit Count: 2 )
Hit Wheat ESTs
Acc. No. Clone Name Length
CJ692098 whrd8a13 733
more... (Total Hit Count: 9 )
/rice/oryzabase