cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
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General information
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RAP - Accession No.
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AK069568
Link to RAP-DB
(
IRGSP 1.0
)
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RAP ID
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Os01g0739000
(
IRGSP 1.0
)
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RAP - Chromosome No.
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1
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RAP - Location, Length
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32,580,345 -
32,585,887
( - );
5,543(bp)
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Exon (Data source : RAP-DB)
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Exon 1
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Location |
32,580,345 -
32,580,764
( - );
420 (bp)
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Exon 2
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Location |
32,580,959 -
32,581,071
( - );
113 (bp)
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Exon 3
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Location |
32,581,858 -
32,581,907
( - );
50 (bp)
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Exon 4
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Location |
32,581,995 -
32,582,065
( - );
71 (bp)
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Exon 5
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Location |
32,582,148 -
32,582,220
( - );
73 (bp)
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Exon 6
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Location |
32,583,167 -
32,583,264
( - );
98 (bp)
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Exon 7
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Location |
32,583,359 -
32,583,425
( - );
67 (bp)
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Exon 8
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Location |
32,583,573 -
32,583,653
( - );
81 (bp)
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Exon 9
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Location |
32,583,735 -
32,583,902
( - );
168 (bp)
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Exon 10
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Location |
32,583,986 -
32,584,153
( - );
168 (bp)
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Exon 11
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Location |
32,584,236 -
32,584,532
( - );
297 (bp)
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Exon 12
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Location |
32,584,628 -
32,584,849
( - );
222 (bp)
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Exon 13
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Location |
32,585,710 -
32,585,887
( - );
178 (bp)
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Chromosome: 1
, position: 32,580,345
- 32,585,887
bp
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Now loading
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Sequence (Data source : RAP-DB)
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Nucleotide
Fasta Format
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000001 actccacgtc tccacccggc cgagctcaac ctccgcgccg caccggacgg tcgcacccgc
000061 gtctcccacc tccccggcgg cggctcccct catctccgcc ggtcgcctcc tccaagcctc
000121 cgcgacgcgc acggcagaga tgtaccgcat cgccgggagc cacttgcgct ctctcaaggt
000181 accgcaccct cccatcccga tccttcccgc tgcaaaaccc cccatccgat tcgcccgacg
000241 cggggggcgt tccgtgtagg aattgatggt gattgtggct aatccttgtt tacttagtca
000301 gatgttgaaa cgggagatag attgtttgtt gtcccacgat gagaagaaga aacctgcatc
000361 ccgatacatt tagcggtcac tgattctctc tagcacttac cgttttcctg ttaaatttat
000421 tcagataacg cagctgaagt cctgtaaatc ctttaaccaa catttttcgt gacggtgcgg
000481 gatgctatgt tgaatgcacg gacgccacat tttcttttgc ctattgcatt atattatttt
000541 gactttttaa gctgttttct ttgcttgtct gatctgtcta gaagtgttgg gttgatgagt
000601 tatcgctaac tcaatacaca tagtgcttat atcatctttt cagattgata atgttaatac
000661 gatattttga gtttttttgg gtaaggttca cctgaatgtt taaaacaact attttaatgt
000721 aactattata ctgcaatttg attccaaagg gaaagggtga tgtatgacag tataagttaa
000781 gctgcaaagt ttacttctcg gagatttctt ttcgcaatat gatcttgcta gtttggtttt
000841 tcagtgacca ctgcctccag tattttctgt aatttgtata gaattttttt catgtgcaag
000901 tttttcagtt tgagtacctt cttacttcta agtaatttca cctcatgttg tttctgccac
000961 attatttgtt ttcctttatt tccataaaac catatcatgt atcataaaga cgcatctctt
001021 ttgcttatgt ggttgcagag atacagttat agtaggtttg ctagtacaag tgttgtgaag
001081 cagtcttcag gtggtttgtt tagctggctt cttggggaga agtcaagcca attgcctcct
001141 cttgatgtcc ctctcccggg tattaccctt cctccaccac tgccagactt tgttgaaccg
001201 tctaagacaa aagtcaccac tctcccgaat ggcatcaaga ttgcttcaga aacgtcagtg
001261 gtatgatggt atcactatat gccttcaggt gttttaatag attctctttt ttctgcatca
001321 gcatgaaaag taaatttttt aggacttatc tgcagagtcc agcagcatct gtgggactgt
001381 atattgactg tggttcaata tatgaaacac ctgcttcatc tggagcatca catctgttgg
001441 agagaatggc gttcaagagc actacaaaca ggagtcattt gcggctagta cgtgaagtag
001501 aagccattgg agggaatgtc tctgcatcag cctctcgtga acaaatgtgc tatacctatg
001561 atgcattcaa ggcctatgta cctgagatgg ttgaagtgct tattgatagt gtgaggaacc
001621 cagccttttt taactgggag attaaagagc aggtattctg tcattccgaa attagcattt
001681 ttgatattct gtatatgttg gcattataat aatgatgtct tgttccccct acagctggag
001741 aagatcaagg ctgaaatagc tgaagtttct gataatcctc aaggtttact tctagaggca
001801 ctccattctg ctggctattc tggggcactg gcgaagcccc taatggcacc tcagtccgct
001861 attcataggt tggacagtag tatccttgag gaattcattg ctgtaagatt catcaacttg
001921 ccatttatat tgtttttttg ttagaaagtg cgtgctttga catatgcttg cattgatgaa
001981 ttcaggaaaa ttacacagca cctaggatgg tccttgcggc atctggagtt gaacatgatg
002041 aactagtttc aattgctgag ccacttctgt cggatcttcc cagtgtgaag cgtccagaag
002101 agccaaaatc agtttatgtg ggaggagact atcgttgtca agcggactct gacgtgagct
002161 tttgctgctt tacgctgttt gttgatgagg atgtgtatat gtacttataa tcctggcttc
002221 cttttcatga acagaagaca catattgctc ttgcttttga agtaccaggt ggatggtttg
002281 aagagaaaac tgccatcatt gttactgttc ttcaggtatt gttggcaaac atcaaattta
002341 accattattc agagacaaaa ctcaactatg gtataccttt tatgtagttt actgtctagt
002401 agactgcctt atatgttcac catttcttta tacgcaatat ggatggtctt gttattttgc
002461 agatgctcat gggaggaggt ggttctttct ctgctggtgg tcctgggaag ggcatgcatt
002521 ctcgattgtg tatgttgaat tccacattct tgtcaatgtt tcaaaaaatt aagttgactt
002581 cttgtgccaa tttcttaaca ttagcgtgat gctttattta cagatctccg gatattaaac
002641 aactaccatc agatcgagtc attctctgca ttcaacagta tctacaacca ttctggtctt
002701 tttggaattc atgcaacaac tgtgagcccc ttatcagaca tggatgatcc tgcttttttt
002761 tttgccaaat tcaagaagta aatgtagttt agtgtctgtc tttttatacc aaatggaata
002821 gcctactcta gtagttatta taatgtccat tatgtgtata tctggtcagt ggtgaaccca
002881 gaacaaaaat tgccgggggt ccaatacatt attacttaat tattgactga tttaatagtt
002941 taggacataa tttggttagg attgaataat ctatctgggg tcctgtgacc ctgggaagct
003001 caacataggc actccattgt atttggtagt tgatttgtgt gcacaaccaa cctggtctct
003061 tttatccttt ctgcttctgg gatttacaca ccatcttacg catggaataa cttgattgca
003121 tgaggcctgt gatgaaaccg ggcaaagcag ccagtgacct ttgtaaccaa aatagagagg
003181 tcaaaagttc cttaagtagg tgaagaggga gaattttagt gcctttatta cggatataat
003241 agaagctaga agcaaccaat acttttgtgg gatgtgtgga aagcatccat ctggaactgt
003301 gagaagtatt gtttgcatac ttctctgttt agcagggtat atggcaaatg ggcacatcgc
003361 ctgctctact catttgtttt gagatgtttg ttatgcattc taccttcact ccatatctcc
003421 tatcactata ttgtacaaca atttgtacca tttttttcct ctttctagtt ttccttggaa
003481 atgaaactgt gcaaagggag tgagaagatt gactaaagcc ttgtagagac atcaatttgc
003541 atccatttct ttcttttcat tttgttgtgt tcattgtgct attaaatgat agaatcactt
003601 gtcagtaaca ctttttgcta ctcctttcat gatatataat tgacacagct ttatgtcttg
003661 caatcagagc ccaaattttg cttccaaggc tgtggatttg gcagcaggag agcttcttga
003721 ggttgcaact cctggaaaag gtttgcttct tatttgacat attggatatt tataaggacc
003781 atgcccatat atattttcct catggctgta ttttttgtgt agttacacaa gaacagcttg
003841 atcgagctaa acaggcaacc aagtctgcag ttttgatgaa cttggaatcc agagtatgca
003901 tttctaacca ctacttgaat cctttgtgct tatcttttgt ttcctgttgt atccttgaca
003961 ctttgttttc ttcactgcag gtcgtagcat ctgaagacat agggaggcag attttgacgt
004021 atggggaaag gtatggttgc accagcattg gtaacatagc aacaaaagtc acctcacatg
004081 gttcttaaac ctttatgtgc actagccatg cattcactat catttatgag ctatgattgt
004141 gcaatcatgc tgtgtcctga caattttaag aacgggaact ttagcatgtc attaaaatca
004201 tagtgaaacc tacaaatata tgttgtctat tgagatgtca ccttcagtat ttacacaagc
004261 atagagcttt gatccttcaa ctgtgaatga actacaacag tttgcttttt gtgtagtgtt
004321 cgttttttgt tgtgaacata catgctaagt tcattctagt tttaacatgc attactattg
004381 acatttctct atatactact atgaagaggg agtatgtccg tttacttgga actcggaaaa
004441 tccagtttga ataaactaat ctgtatagcc gcctgtgcac cgccttgctg atgtaatgac
004501 atcctgccaa tgtatagcac tccgagcaat tgaacaagat gattcctctc cttagcccct
004561 ctcaatgtcg atcttctata attactacaa tagtaatgta tgttttatat cccattgaat
004621 ggcatggggc tgggcaatac aaatagaccg ccggatgtct atataaccgt agttgcatca
004681 actattgcgg aatgaggatt gccaacaatt ttctgttagc tagtcagtgg tcatcactat
004741 tatggcaata gaccgtcgtt cagcttttta cccttagttg tgaatctcta actattcagc
004801 tttgttggga tcgcaggaaa cccattgagc atttcttgaa agatcttgaa gcaatcacct
004861 tgaatgacat ttcttctact gccaagaaga tcatttcatc accccttaca ctggcatcat
004921 ggggtgacgg tatgttctaa cttaatcttc atcaaagtat ttccttgtga ggattatgta
004981 atactccctc cagttttttt tatatgacgt tggctagttc aaatttgaac tagtcagcgt
005041 tatacatata aagatggagg cagtactacc ttttataaac taataatttt ggacttgtga
005101 ttcactagaa tgctttcttg cagttattca tgtcccgagc tatgaatctg ttagccagaa
005161 gtttttctca aagtaagcaa gcctatcgca tggcttgccc ccgacttcta aagttgcaga
005221 cgtgtaactc tactggtcct tggccctaac cgctggaatt cacaataata aattgtctag
005281 acttattttt cttagatatt ttaattttaa gcaaataata gttactcaaa cggcgatgat
005341 gctgactgtc ctttttattc ttttccttta ttatattgat ccataatttt gcgtcaggct
005401 ggaactattt ttagttccgc ggtggtgttg ttgttttttg ttttgttttt tttttgtcgt
005461 gctgagctta gcacagctga gctgttgcgt atgtgtcgtg acttcaagtc tatgcatgct
005521 gaaatcgtct tgatgatttt tcc
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Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.
Update info.
