cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA
General information
RAP - Accession No. AK101380     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os04g0186400 ( IRGSP 1.0 )
RAP - Chromosome No. 4
RAP - Location, Length 5,834,878 -  5,837,722  ( + ) ;   2,845(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 5,834,878 -  5,837,722 ( + ) ;   2,845 (bp)

Related Rice IDs
RAP Locus RAP ID KOME
Clone ID		 KOME
Clone Name		 KOME
Cluster ID		 MSU ID cDNA
Accession No		 RiceXPro
FeatureNum		 RNA Nucleotide
Accession No		 RNA
Nucleotide GI		 Genomic Protein
Accession No		 Genomic
Protein GI		 RefSeq Genomic
Nucleotide
Accession No		 RefSeq Genomic
Nucleotide GI		 RefSeq RNA
Nucleotide
Accession No		 RefSeq RNA
Nucleotide GI		 RefSeq Genomic Protein
Accession No		 RefSeq Genomic
Protein GI		 UniProt
Accession No		 UniProt Entry
Name
Os04g0186400 Os04t0186400-01 212222 J033036E12 12628 LOC_Os04g10750.1 AK101380 19704 AK101380.1 32986589 BAG95035.1 215715284 NC_008397.2 297603645 NM_001058729.1 115457187 NP_001052194.1 115457188 Q8H6H2 PHT14_ORYSJ
Os04g0186400 Os04t0186400-01 212222 J033036E12 12628 LOC_Os04g10750.2 AK101380 19704 AK101380.1 32986589 BAG95035.1 215715284 NC_008397.2 297603645 NM_001058729.1 115457187 NP_001052194.1 115457188 Q8H6H2 PHT14_ORYSJ
Os04g0186400 Os04t0186400-01 212222 J033036E12 12628 LOC_Os04g10750.3 AK101380 19704 AK101380.1 32986589 BAG95035.1 215715284 NC_008397.2 297603645 NM_001058729.1 115457187 NP_001052194.1 115457188 Q8H6H2 PHT14_ORYSJ
Os04g0186400 Os04t0186400-01 212222 J033036E12 12628 LOC_Os04g10750.4 AK101380 19704 AK101380.1 32986589 BAG95035.1 215715284 NC_008397.2 297603645 NM_001058729.1 115457187 NP_001052194.1 115457188 Q8H6H2 PHT14_ORYSJ


Chromosome: 4 ,  position: 5,834,878 - 5,837,722 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format 
000001 agagttacag tgctaacggc ctgcagcaga gtgcagtgac tcccctgaag aaactggtat 
000061 attaatatca ggtgtgtata tatttcacat tttattctag tactactatt aatgacatgt 
000121 ctatatatgt caattttaag tacatacatg tatgggagat taaatttttg atatgttcac 
000181 aagtttcttg ctgatgaaac atgcgtcaag gcaggatgtt gtgtaagggt gttaattact 
000241 gattggtcat tagttgccct catgaatcca tgaaaaagtt cttcataaag tcatcacaag 
000301 aagagacctt ttgtgctctc tttacggcat gcaaaggtca cgaacagttt aacaaaaaca 
000361 cctttgcata ctagtctccc tcctcgtcat acttcagcaa ccacaagatt tcttttctga 
000421 actttttact aatgaacatt cagaaatttc tgtgcaatat tatctcatga cctgaaccaa 
000481 acgatgcttg agccacgaaa tagtagagga gacaaagata tagtttcgtc aattcgagaa 
000541 gtttgtccgg atactacgga tgatagcggc agatttggac tggttccatg aaagttgtac 
000601 agtaaggtgc gaatcttgag ttgcagagat gcacctggat ccggctatct agcttcacga 
000661 gaatcccatc tctactctcc taaattgccc acgaaactga atttatgtag ggatttttag 
000721 cgaaattcag acatttttca cggggatggg tcggggattg ttgactgata aagctggatt 
000781 tgaagaaaca acaaaatttt gatatatgat accttgaata aacgaggagt ttctgaagta 
000841 gtggcatggt ctgttccaga tgtctctctg aacttccgtt tcagtttcag tggaccatat 
000901 tgttggtgaa ctgaaacgaa tattatcttc tcgtagccac gtgcattctg tagattttct 
000961 tttgctcagt tcgacacata gacatctgag gctaattagc tctgttaatc gcgcggtttg 
001021 tgtaattctc acaaataatt agtttctcgt tcattgcaaa ttgcagcgag attttgtcga 
001081 aataataaac ttggtgttca gttattctct gcaaaaaatt gcatattgca gagtagctga 
001141 gattggcgcc atggccggcg agctcaaggt gctgaacgcg ctcgactcgg cgaagacgca 
001201 gtggtaccat ttcacggcga tcgtgatcgc cggcatgggg ttcttcaccg acgcctacga 
001261 cctcttctcc atctccctcg tcaccaagct gctcggccgc atctactact tcaacccggc 
001321 gtccaagagc cccggctccc tcccgcccaa cgtctccgcc gccgtcaatg gcgtcgcctt 
001381 ctgcggcacc ctcgccggcc agctcttctt cggttggctc ggcgacaaga tggggcgcaa 
001441 gaaggtgtac ggcatgacgc tcatgctcat ggtcatctgc tgcctcgctt ccggcctctc 
001501 gttcgggtcg tcggcgaaag gcgtcatggc cacgctctgc ttcttccgct tctggctcgg 
001561 cttcggcatc ggcggcgact acccgctctc ggcgaccatc atgtcggagt acgctaataa 
001621 gcgcacccgt ggagcgttca tcgccgccgt gttcgccatg cagggcttcg gcaacctcac 
001681 cggcggcatc gtggccatca tcgtgtccgc cgcgttcaag tcgcggttcg acgcgccggc 
001741 gtacagggac gaccggaccg gctccaccgt gccgcaggcc gactacgcgt ggcgcatcgt 
001801 gctcatgttc ggcgccatcc cggcgctgct cacctactac tggcggatga agatgccgga 
001861 gacggcgcgc tacaccgcgc tggtcgccaa gaacgcgaag caggccgccg cggacatgac 
001921 gcaggtgctc aacgtcgaga tcgtggagga gcaggagaag gctgacgagg tcgcgcggcg 
001981 cgagcagttc gggctcttct cccgccagtt tttgagacgc catgggcgcc acctgctggg 
002041 cacgacggtg tgctggttcg tgctggacat cgccttctac tcgtcgaacc tgttccagaa 
002101 ggacatctac acggcggtgc agtggctgcc caaggcggac accatgagcg ccctggagga 
002161 gatgttcaag atctcccggg cacagacgct cgtggcgctg tgcggcacca ttccgggcta 
002221 ctggttcacc gtcttcttca tcgacatcat cggccgcttc gtcatccagc tcggcggctt 
002281 cttcttcatg acggcgttca tgctcggcct cgccgtgccg taccaccact ggacgacgcc 
002341 ggggaaccac atcggcttcg tggtcatgta cgccttcacc ttcttcttcg ccaacttcgg 
002401 gcccaactcc acgaccttca tcgtgccggc ggagatcttc ccggcgaggc tgcgttccac 
002461 ctgccacggc atctcggcgg cggcggggaa ggccggcgcc atcgtcgggt cgttcgggtt 
002521 cctgtacgcg gcgcagagca cggacgcgag caagacggac gccggctacc cgccgggcat 
002581 cggcgtgcgc aactcgctct tcttcctcgc cggatgcaac gtcatcgggt tcttcttcac 
002641 gttcctggtg ccggagtcga aggggaagtc gctggaggag ctctccggcg agaacgagga 
002701 cgatgacgat gtgccggaag cgcccgcgac ggccgatcac cggactgcgc cggcgccgcc 
002761 agcttgatac cccgcggcaa aacccaaatg gtcaatcatc agtgttttgt tgtaatatat 
002821 gtgcaatgga tgattattct ggttc

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Barley ESTs
Acc. No. Clone Name Length
AK248434 FLbaf178m10 1916
more... (Total Hit Count: 30 )
Hit Wheat ESTs
Acc. No. Clone Name Length
CJ804409 whsct30i14 671
more... (Total Hit Count: 48 )
/rice/oryzabase