cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA
General information
RAP - Accession No. AK073109     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os04g0610600 ( IRGSP 1.0 )
RAP - Chromosome No. 4
RAP - Location, Length 31,450,113 -  31,451,288  ( + ) ;   1,176(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 31,450,113 -  31,450,366 ( + ) ;   254 (bp)
Exon 2 Location 31,450,469 -  31,451,288 ( + ) ;   820 (bp)

Related Rice IDs
RAP Locus RAP ID RAP Annotated
Accession No		 KOME
Clone ID		 KOME
Clone Name		 KOME
Cluster ID		 MSU ID cDNA
Accession No		 RiceXPro
FeatureNum		 Genomic Nucleotide
Accession No		 Genomic
Nucleotide GI		 Genomic Protein
Accession No		 Genomic
Protein GI		 RefSeq Genomic
Nucleotide
Accession No		 RefSeq Genomic
Nucleotide GI		 RefSeq RNA
Nucleotide
Accession No		 RefSeq RNA
Nucleotide GI		 RefSeq Genomic Protein
Accession No		 RefSeq Genomic
Protein GI
Os04g0610600 Os04t0610600-01 J033022D23 209200 J033022D23 11257 LOC_Os04g52110.1 AK073109 35471 AP008210.2 255675107 BAF15745.1 113565402 NC_008397.2 297603645 NM_001060366.1 115460461 NP_001053831.1 115460462


Chromosome: 4 ,  position: 31,450,113 - 31,451,288 bp

   Now loading


#
#
Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format 
000001 acgacgcttg cacttacagc tgcagctagc tttgcccagt tttgcttagc ttttctctgc 
000061 ttccttcgat cccatccatg tccaggttga tggccgccat gctgctcggt ggcgcccgcg 
000121 tcgccggtaa caccaccacc gccgtgatgg cgcttcatca tccgaggccg tcgtacttcc 
000181 tccctccccg gccgcggctg gcggcggcga gctggagccg cctccgcctg cagaccgcgc 
000241 cgagatcatc ccaggtgcgt accgttcgtc cgtcgtcgat cgccgtcgcc ggtgagtgat 
000301 gggtgttgtt gggttggctg gctgacatca atggccgtcg tttttgttcg gggtaggcgt 
000361 acgacaactc gccggcggac gaccgaaggg acgtcgggga caggtacagg gacgccgcgg 
000421 aggaggcgaa ggaggccacc ggcgacgcca aggagcgggt gaaagggatg gccggggagg 
000481 ccaagggcag ggcggcggac attgccggca gggccaagga cgagaccaag gacacggcgt 
000541 cgcgcgcggc cgacgcggcg tcgcgggcga cggaccgggc gaagcacgag gccgccgaca 
000601 aggcggcgga cgtgaaggac cgcgccaagg acgcggcgga catggcgcag ggcacggcga 
000661 gggcggtgag ggacaagacg gcggagacgg cggagggcgc catggacagg gccggcgagg 
000721 ccaaggacag gacagtggaa gggacgaagc acgccggcga gaaggtggcg gagatgacca 
000781 aggaaggggc gagcaaggtg gtggagacgg cgcaggccat cggcgagaag gcgaagcagg 
000841 cggcgcaggg cgcgtggggc gccaccaagg aggcggcgca gggcgtcaag gacacggtcg 
000901 ccggcggcga cgtcgacgcc gacgccgcga tgaaggagca ggacaggatc gcgcaggagg 
000961 agaagaagag gcaggccagg gagaagggcg ctggcttgcc ttaggctaaa actgcatact 
001021 tgttgcatgc ttatttgtac taaaagcttt tttttttagc tgaattttag tcggttcagt 
001081 tcttttggtt gaataatgtt ggcaaacttg agcctcctaa tgtctgtaag actgtaactg 
001141 taatggaaag gaacttattg aagttattag ccatgc

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Barley ESTs  
Acc. No. Clone Name Length
AK250021 FLbaf63h21 1310 view details
Hit Wheat ESTs
Acc. No. Clone Name Length
CJ641320 whec4k17 602
more... (Total Hit Count: 5 )
/rice/oryzabase