cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA

General information
RAP - Accession No. AK072320     Link to RAP-DB ( IRGSP 1.0 / Build5 )
RAP ID Os04g0401000 ( IRGSP 1.0 / Build5 )
RAP - Chromosome No. 4
RAP - Location, Length 20,058,018 -  20,059,704  ( - );   1,687(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 20,058,018 -  20,059,031 ( - );   1,014 (bp)
Exon 2 Location 20,059,168 -  20,059,249 ( - );   82 (bp)
Exon 3 Location 20,059,618 -  20,059,704 ( - );   87 (bp)

Related Rice IDs
RAP Locus RAP ID KOME
Clone ID
KOME
Clone Name
KOME
Cluster ID
Tigr ID cDNA
Accession No
RiceXPro
FeatureNum
Os04g0401000 Os04t0401000-01 208323 J023029D20 10680 LOC_Os04g32850.1 AK072320 28307
Os04g0401000 Os04t0401000-01 208323 J023029D20 10680 LOC_Os04g32850.2 AK072320 28307
Os04g0401000 Os04t0401000-01 208323 J023029D20 10680 LOC_Os04g32850.3 AK072320 28307


Chromosome: 4 ,  position: 20,058,018 - 20,059,704 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format
000001 ccatccatgc atcgcctcca ttattcatgc ttcgattctc catgctttcc tctactgctc 
000061 attggtaaca ttcggcaaat ttgacaggtg agctcagtat tttaaatctt aatgtagtac 
000121 tttggtgtgc taatctttgc tctgttcaaa agagaattct ggtttctttg ctattttgaa 
000181 aagagaattt tcgttacagg acttcaactt ccataatact tttttttata attaaggcat 
000241 gatatatatc ttctttctga attccacggg aattgcactt tttcctgaga aatttgtaaa 
000301 gagcatgcct gttaattgca aggggcccct aactctgtta tgagaaaaga gaactatata 
000361 agatgctcaa taagcacctc tttttttttt tctgttaact gaccaaagcc tgtctatctg 
000421 catttttttt tgttttttgt ttttcttgtg tgcagatggg tatattggtc atcttggtgg 
000481 acctgcaatg ctgccgctgc gatgccaaga tcaggaaggt cctgggctgc cttgaaggta 
000541 taataaattc tgcccgaatc gtccatgttt gattgaattt tcaaggctaa tcagcagtgt 
000601 tcctgctcaa ttgggagcaa aacctctgtt aaaaagggtg tgtttgaatg aatataattg 
000661 aatatgaacg cagaggagta ctgcatcgag aaggtggagt acgacgtgaa gaacaacagg 
000721 gtgatcgtgc gcgggaagtt cgacccggag aagctgtgca agaagatctg gtgcaaggcc 
000781 ggcaagatca tcaaggagat cctcatcgtc gacgtctggc cgccgccgct gccgcagccg 
000841 ccgccgccgt gcaagccgcc gccgtgcgag aagcctccgg aggactgcaa gcccaagccc 
000901 tgccattgct gcagctgcga gaagcccaag cccaagccca agccctgcca ctgcgagaag 
000961 cccaagccct gtcactgcga gaagcccaag ccatgcgaga agccgccgcc gtgcaagccg 
001021 gaggagccgc cgaagccgcc gccggagaag ccgccgccga agccggagtg caagctggtg 
001081 ccgtaccctt acccggtgcc gtacccgtac gccgggcagt ggtgctgccc aaagcctgag 
001141 ccgccgaagc cgccgccgga gccaccgaag gagccggagc cgccgaagcc gtgcgggtgc 
001201 tcgcacgcct tcgtgtgcgt ctgcaagccg gcgccgccgc cgccgccgcc gtgcgggtgc 
001261 tcggggggcc acgggaactg cggctgcggc atcaggccgt ggccgccgca ggtgtggccg 
001321 ccgccgcccg tctgcccgcc gccgccgtgg tgctacaccg aggacaacgc caacgcctgc 
001381 tccatcatgt gatggccggc cggcggtcgg cgtcgatcac gatcatctct gctgcttaat 
001441 ttccttgctt gctactacct ctgctccttt ccttgcctcg gaaatcggaa taaattaaac 
001501 acgaggctga tcgatgtgtt tgtaattaat ccatggtgtt tgtgttgtgt gctgtgtggg 
001561 ctgtataata attaattaca gtatgttcat gtaaatttgt ttgtttgttt gtttatgttg 
001621 ttcgatatgt ataattatgt acaataatta atcgtggaga ggctcactaa actcataaac 
001681 tgtagag

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Wheat ESTs  
Acc. No. Clone Name Length
CJ716974 whvd14f02 820 view details
/rice/oryzabase