cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA
General information
RAP - Accession No. AK070734     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os04g0604300 ( IRGSP 1.0 )
RAP - Chromosome No. 4
RAP - Location, Length 30,981,383 -  30,982,664  ( - );   1,282(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 30,981,383 -  30,981,899 ( - );   517 (bp)
Exon 2 Location 30,982,016 -  30,982,215 ( - );   200 (bp)
Exon 3 Location 30,982,312 -  30,982,664 ( - );   353 (bp)

Related Rice IDs
RAP Locus RAP ID RAP Annotated
Accession No		 KOME
Clone ID		 KOME
Clone Name		 KOME
Cluster ID		 MSU ID cDNA
Accession No		 RiceXPro
FeatureNum		 RNA Nucleotide
Accession No		 RNA
Nucleotide GI		 Genomic Protein
Accession No		 Genomic
Protein GI		 RefSeq Genomic
Nucleotide
Accession No		 RefSeq Genomic
Nucleotide GI		 RefSeq RNA
Nucleotide
Accession No		 RefSeq RNA
Nucleotide GI		 RefSeq Genomic Protein
Accession No		 RefSeq Genomic
Protein GI
Os04g0604300 Os04t0604300-01 J023062B10 206559 J023062B10 5870 LOC_Os04g51460.1 AK070734 45111 AK070734.1 32980757 BAG92117.1 215697918 NC_008397.2 297603645 NM_001060322.1 115460373 NP_001053787.1 115460374


Chromosome: 4 ,  position: 30,981,383 - 30,982,664 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format 
000001 actacacctt cactttctct tctcatcatc tatatcacga tcgatcacaa agaggttaac 
000061 agtaacacat ggggttcggc tcgagggaga tggcctgcgc gctcgtggcg ctggtgctcg 
000121 ggctctgctg cgtcggcggc gcacgggcga cggggaggat cgacgagggg ctggaggtga 
000181 tgtggggcga cggccggggg agcgtctcgc cggacgggca ggtgatggcg ctgtcgctcg 
000241 accacacctc cggctccggg tggaggtcca agaacacgta cctgttcgcg cgcgtcgacc 
000301 tgcagatcaa gctcgtcgcc aacaactccg ccggcacggt caccacctgc tacgtaagcc 
000361 agcactcgca ctgacacatt ctttgtgtga tcggatcttt tttttttctt ggctcgtgtt 
000421 cgagctcacg tacggtggat tccatgcagt tcatgtcgga aggggagtgg gatatccacg 
000481 atgaggtgga cctggagttc ctcggcaacg tcaccgggca gccgtacacg ctgcacacca 
000541 acgtcttcgc caatggcacc ggcggcaaag agcagcagtt ccacctctgg ttcgacccca 
000601 ccaccgactt ccacacctac tccatcgtct ggacctcgca gcacatcctg taagctcatg 
000661 caattcactc atcaaccaaa tgcacattct cagtttataa tcactcactc gctcgccgcc 
000721 atggatgccg atcgagctga caaataatgt atacgtttat cgcagtgtgc tggtggacgg 
000781 gacgccgatc cgggagatga agaaccacgc ggacaagggg atcgcctacc cgtcgtcgca 
000841 gcggatgcgg ctgtacggga gcctgtggaa cgccgacgac tgggccacgc agggcgggcg 
000901 cgtcaagacg gactggtcgc aggcgccgtt cgtcgcgcgg taccgcaact tcaccgccac 
000961 ggaagccgcg tcgtcgtcgt cgccggcagg gtacgaccag cagatggacg ccacggcgca 
001021 gcaggcgatg aagtgggcgc gcgacaacta catggtgtac gactactgcg ccgacagcaa 
001081 gcggttcccg cagggcttcc cgcccgagtg ctccatgccg tagagtggag tggagacgcg 
001141 ccaaagcctc ggtgcacttt gatgaacgcg gactcgatcg aactcacgca gggcacgcat 
001201 tgacctcgtt tttttatttt tacttctctt gattgaattg attcattctt tctatgtaaa 
001261 gtagatatat atatatatat at

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Barley ESTs
Acc. No. Clone Name Length
AK252817 FLbaf164n20 1264
more... (Total Hit Count: 3 )
Hit Wheat ESTs
Acc. No. Clone Name Length
CJ778284 whatl25e22 885
more... (Total Hit Count: 17 )
/rice/oryzabase