cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA

General information
RAP - Accession No. AK070581     Link to RAP-DB ( IRGSP 1.0 / Build5 )
RAP ID Os04g0401000 ( IRGSP 1.0 / Build5 )
RAP - Chromosome No. 4
RAP - Location, Length 20,058,091 -  20,059,702  ( - );   1,612(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 20,058,091 -  20,059,031 ( - );   941 (bp)
Exon 2 Location 20,059,168 -  20,059,249 ( - );   82 (bp)
Exon 3 Location 20,059,618 -  20,059,702 ( - );   85 (bp)

Related Rice IDs
RAP Locus RAP ID KOME
Clone ID
KOME
Clone Name
KOME
Cluster ID
Tigr ID cDNA
Accession No
RiceXPro
FeatureNum
Os04g0401000 Os04t0401000-01 206394 J023062P06 5732 LOC_Os04g32850.1 AK070581 25341
Os04g0401000 Os04t0401000-01 206394 J023062P06 5732 LOC_Os04g32850.2 AK070581 25341
Os04g0401000 Os04t0401000-01 206394 J023062P06 5732 LOC_Os04g32850.3 AK070581 25341


Chromosome: 4 ,  position: 20,058,091 - 20,059,702 bp

   Now loading


#
#
Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format
000001 atccatgcat cgcctccatt attcatgctt cgattctcca tgctttcctc tactgctcat 
000061 tggtaacatt cggcaaattt gacaggtgag ctcagtattt taaatcttaa tgtagtactt 
000121 tggtgtgcta atctttgctc tgttcaaaag agaattctgg tttctttgct attttgaaaa 
000181 gagaattttc gttacaggac ttcaacttcc ataatacttt tttttataat taaggcatga 
000241 tatatatctt ctttctgaat tccacgggaa ttgcactttt tcctgagaaa tttgtaaaga 
000301 gcatgcctgt taattgcaag gggcccctaa ctctgttatg agaaaagaga actatataag 
000361 atgctcaata agcacctctt tttttttttc tgttaactga ccaaagcctg tctatctgca 
000421 tttttttttg ttttttgttt ttcttgtgtg cagatgggta tattggtcat cttggtggac 
000481 ctgcaatgct gccgctgcga tgccaagatc aggaaggtcc tgggctgcct tgaaggtata 
000541 ataaattctg cccgaatcgt ccatgtttga ttgaattttc aaggctaatc agcagtgttc 
000601 ctgctcaatt gggagcaaaa cctctgttaa aaagggtgtg tttgaatgaa tataattgaa 
000661 tatgaacgca gaggagtact gcatcgagaa ggtggagtac gacgtgaaga acaacagggt 
000721 gatcgtgcgc gggaagttcg acccggagaa gctgtgcaag aagatctggt gcaaggccgg 
000781 caagatcatc aaggagatcc tcatcgtcga cgtctggccg ccgccgctgc cgcagccgcc 
000841 gccgccgtgc aagccgccgc cgtgcgagaa gcctccggag gactgcaagc ccaagccctg 
000901 ccattgctgc agctgcgaga agcccaagcc caagcccaag ccctgccact gcgagaagcc 
000961 caagccctgt cactgcgaga agcccaagcc atgcgagaag ccgccgccgt gcaagccgga 
001021 ggagccgccg aagccgccgc cggagaagcc gccgccgaag ccggagtgca agctggtgcc 
001081 gtacccttac ccggtgccgt acccgtacgc cgggcagtgg tgctgcccaa agcctgagcc 
001141 gccgaagccg ccgccggagc caccgaagga gccggagccg ccgaagccgt gcgggtgctc 
001201 gcacgccttc gtgtgcgtct gcaagccggc gccgccgccg ccgccgccgt gcgggtgctc 
001261 ggggggccac gggaactgcg gctgcggcat caggccgtgg ccgccgcagg tgtggccgcc 
001321 gccgcccgtc tgcccgccgc cgccgtggtg ctacaccgag gacaacgcca acgcctgctc 
001381 catcatgtga tggccggccg gcggtcggcg tcgatcacga tcatctctgc tgcttaattt 
001441 ccttgcttgc tactacctct gctcctttcc ttgcctcgga aatcggaata aattaaacac 
001501 gaggctgatc gatgtgtttg taattaatcc atggtgtttg tgttgtgtgc tgtgtgggct 
001561 gtataataat taattacagt atgttcatgt aaatttgttt gtttgtttgt tt

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Wheat ESTs  
Acc. No. Clone Name Length
CJ716974 whvd14f02 820 view details
/rice/oryzabase