cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
|
General information
|
|
RAP - Accession No.
|
AK070540
Link to RAP-DB
(
IRGSP 1.0
)
|
|
RAP ID
|
Os04g0580700
(
IRGSP 1.0
)
|
|
RAP - Chromosome No.
|
4
|
|
RAP - Location, Length
|
29,807,507 -
29,813,213
( + )
;
5,707(bp)
|
|
Exon (Data source : RAP-DB)
|
|
Exon 1
|
Location |
29,807,507 -
29,807,718
( + )
;
212 (bp)
|
|
Exon 2
|
Location |
29,809,667 -
29,809,751
( + )
;
85 (bp)
|
|
Exon 3
|
Location |
29,810,155 -
29,810,216
( + )
;
62 (bp)
|
|
Exon 4
|
Location |
29,810,302 -
29,810,401
( + )
;
100 (bp)
|
|
Exon 5
|
Location |
29,811,105 -
29,811,146
( + )
;
42 (bp)
|
|
Exon 6
|
Location |
29,812,507 -
29,812,548
( + )
;
42 (bp)
|
|
Exon 7
|
Location |
29,812,708 -
29,812,847
( + )
;
140 (bp)
|
|
Exon 8
|
Location |
29,812,935 -
29,813,213
( + )
;
279 (bp)
|
Chromosome: 4
, position: 29,807,507
- 29,813,213
bp
|
|
|
Now loading
|
|
Sequence (Data source : RAP-DB)
|
Nucleotide
Fasta Format
|
000001 gcaaaagttg aggnaatgga tcgatcagag atggggaggg gaagggttga gctgaagcgc
000061 atcgagaaca agatcaaccg gcaggtcacc ttctccaagc gccgcaacgg cctcctcaag
000121 aaggcgtacg agctctccgt gctctgcgac gcggaggtgg cgctcatcat cttctccagc
000181 cgtggcaagc tgtacgaatt cggtagcgcc gggtaagcgt gtgcatgatc cgttcagtac
000241 cctaatcgta tgtgattctt gcagatctgg tgattaattt ctctcttccc tttggtttgt
000301 tttgtttcct tccatgggat gcgtattctc gtttgcttcc tcagcttaaa tccgaaattg
000361 tttcttagat tttttgttac caagtatata tatgtgctcg ctggtttatt ttgctatatg
000421 gttttttgtt tctcgctagc gtgcatgtgt tttcatacat cttttaggct taggtaatct
000481 tgccggatgt atgcctagct cttgctactt gcatacttgg gtaatctttt cataatgaaa
000541 atcctccagc cctaactcaa taaagcacat aatatctctt cttcttcttc ttcttcagaa
000601 cctaaagagc attgatttct ttcattcgtg cgtgtgcccg gcgtgcgcat gtcaggagca
000661 gctaggtata tgaggctctg aggcgcaagt tttctgattg caagagtgac ttgaagggga
000721 aagtgatggg gtctgctgtt tccatttaga tgccgcacca agaactttgt ttaaatcttt
000781 tttttcagaa ttattgccta atttgatatc catatatttc attcctgcaa gtatataaca
000841 tcttctcttg ccatctctca ggtaaattat attacatatg aaccatgcat atgcctctct
000901 tttcttttga tgcatttgtg ttttcctgaa aggttcgtgt tcccgtttaa ataaagcttt
000961 cagatttttt tcctgatagg tacatgagtt tttttttcat ttatttgatt aaaccctcaa
001021 acattatcat cactttagct gcatatatat gaattcgatc tttcaaatct cttatgtgta
001081 tacgctcttt tgcaagattt tgtgattctg gtattattat ttttttcttg ttgcattgcc
001141 tcttgctaat acatgaaggt aaccgagagg ggcttatgca cattttgagt tgaatgttag
001201 taattgctat atgtattgac gggaaaatca taaatatata tagacgaaaa ataactgtgt
001261 tgattgaaat gcatggatcg aattgaacac cgtttagttg tggaaattct tttatttctt
001321 ctccggtgat cagtgtgtag ggcttctctc cagggaccat cagagcaggc gggccatgaa
001381 aaaaattttg aataaagtaa atacattacg aaagagtttt gtgttattgt gaccggcaac
001441 tcttgttgct gaacttgctg cttgaacctg gtatgcacat gaatatggtg gtttttcttt
001501 ttttcatcat agtttatttt gcaacattta ctttggagtc gccaagaaca cacatataaa
001561 gctttactta gaaatattct ttttatttgc taataagtga ttcggataag catatgaata
001621 agcgaaacaa tgaggctttg tgtccgaatt agagcatcat taaacaattt ctgaaaacaa
001681 tttcttcagt agcgatgatc gaaagggatt cgttgaactc taacaattat taaaattgtt
001741 cttgaccaca aattcacctg gccatatgat tatcattacc tattttctgc aattaaattt
001801 atgtattttc attctgttat attagtctcc tgctgtttaa aattacatat cattctacct
001861 tgtcctaatt tatgtcaaac atttctatcc ttgacagtca atttctagaa atttgtataa
001921 gttaacaaca tgcgaattat atattacaaa agtatttctc atgatgaatc taaaaacata
001981 aatcttatga tattaaacta tatgaaattt taaattttga tggcaaaacg tacaaatgtt
002041 taacttagaa caaaactaga atgcaagtaa tttcaaatgc agggcgaaga gtagatttta
002101 ttgcattcgg ctttatgtat gtgagtaagt aacatatcct aaacctattt ttgtttgcag
002161 aataaacaag acattggaaa agtacaatag ttgctgttac aacgctcaag gttcaaatag
002221 tgctcttgct ggtggtgaac atcaggtatt catagaatag ttgtcaaaca cacttcggta
002281 accatattat gtagaatcct ttaaagttca aatatacata tctagacctc tttgccagta
002341 atattgtctc aaattcttga gatgcaagga ggatcaatga agagatatat agtacttaaa
002401 tattgctgat tttaatttga agattgcaat caaattctaa tatatgtact agttcagtga
002461 ataagatatt agtacttaca ttttctaaac ctaatgataa tatcgctttt ttccttgatg
002521 caataaaaat taaacattca gattcatata aaataaaatt caagggtaaa taagaacaaa
002581 aataaatgct tactattttg gattttatca attattggtt ttagtttttt ttcccatttg
002641 acccatagag ctggtaccaa gagatgtcaa ggctcaagac taagcttgaa tgtctccaac
002701 gctctcagag gtactgcact gcatcagctg tttcaggaac acttgaaatg cttcaccact
002761 tgaatgtttg ggtgttatat ttgcatatac aacaggcaca tgcttggtga agatcttgga
002821 ccattgagca taaaggaact gcagcagctg gagaagcaac ttgagtactc actgtcacag
002881 gctcgacaac gaaaggttat atcaccacac aataaaataa gtgtagttcc ttcaattacc
002941 ttgttaatta acatacaata atatctgcta ttatctagta caatactgta tgcattattc
003001 tatatataca acctatatct tgacaaataa aagggatata tactgcaaat atatccatct
003061 gatgaattgt aagaaattaa ccacttaagg ccgtaaatgg tgctaaaaaa gacaacgcag
003121 ccgtaatata tataagcaac aaatattgca tgagtgtacg tacttgatca acaaatttta
003181 cggcgatctc tgctggtagt aggatcaata tctggacctt tcatctttac ctatccaata
003241 tatatttata ttactaactt aaccattggt agtagaatat tttgtctata ggtagtaaaa
003301 ttcataaatc aactgtatat aatttctact gataataaaa taatatcaat aaatatcaca
003361 attaataaaa gtacttgatt gagcaccaag tttatttcta taataaaaag acaccataag
003421 ttttctataa ttgcttttgc ttccttccaa cttcgggggg acatggttta tatgctccta
003481 tgccctgaaa tactaaatat gtcagaagaa gaagacaaca aagtacaggg cttaacttgc
003541 atgctcgtcc atataaaagt tatctaaatt ttagttgagt tctttgtatt tatttcagac
003601 acaaatcatg atggagcagg tcgacgatct tcgccggaag gtattggaat atctgtcaaa
003661 tgttgtcgct tttctataaa tctgtaacat cgtaattaat catatgatca agattactaa
003721 accatatatt tgtatgatat gatagcttat cagatctaga taattaatcc tgaaggttgt
003781 ggacgtattg ctttataatt caatacttgt tgcttcagat atggggaatt tcaagtgcac
003841 cacagagttc gaggacatca aacattatgc tgccattttt tcagaatctt tcctaaatat
003901 ttatatatgc tttggttatt actagggtat tccgtgagga actatatatt ctctccttta
003961 gatgagaatg tatttgttcc tgattttact caatcgtaaa aaaaaaaagg tttataccta
004021 ggaaaataaa tgtaacacct tataatacag atgcccatct gagtcgctgc gtccgtacct
004081 acatttcata cggctttaat gtttatgcgt taatttttca agttgcaata tggccaccaa
004141 ctattaatta aaaagggatt tattttgtca attatcagaa cgaattattg aatcttatca
004201 agaatgaatt aattacatac caatattatc tatcatgtca caaaatcatt atgatcacaa
004261 ggagctgttt gcaagacttt tagggttaat tctttttttc ttgctatggc taggggtgat
004321 agctgattaa ggtccatgga tttttttaca tccgtatcta gcatttgtat atttttagat
004381 ccagtcttca aattttatag actaaaaact tgggccaatt agcaccctag ctgtggctca
004441 tatgttgctg catatactct ctttatatat atatatgtgt ttgatggtat ttacttttaa
004501 acataaccat tcatattatt gaaagaaccg tgcaaatata tagaaatata agtcatgtct
004561 aaagtacaaa caaaatggaa tagaaggatg aatggtcaaa tttatgttaa aaagtcaatg
004621 gcattagaca aaaaagaaat aaagggagta tacatctacc tatctagctg gaactccaag
004681 ttctattgtc tggaaattgg aataggctag ctcttgctga cctgtttaac tggctttggt
004741 ggggtgctgg tgttccatat gtaatgggga tgacattaca ccaaaatcgc tcagcctttc
004801 tgcttaattt gcttagtagg agtagtgtag tactcctgaa cttgaaccct gtagcatgtc
004861 gtttctgata atagaagcgg gacagagtgt tatgtttttc tatcgaaaaa ataaaatata
004921 gttaatcaca tctaataatc ctgcctcaaa agtgctagtt gtatattccc tagttgactg
004981 attatctggg ctgcctgcag gaacgccagc ttggagagct caataagcaa ctgaaaaaca
005041 aggtcctact tatcgtttcc acaattaatt tctgcctttc aatttggtgg attgggaata
005101 ctgtacaacc acttctctgt tttctagtgt taattagtgt atcttcgaat tttgtcatgt
005161 catttcgcca tgtagtacta acacatcgcc acaccattca gctagaagct gaagccgata
005221 gcagcaactg cagatcagcc atccaggatt cctgggtcca tggcaccgtc gtcagtggcg
005281 gcagagtgct gaatgctcaa ccaccaccag atattgactg tgagcctact ctgcaaattg
005341 ggtaagtttg gaagatgaat caaaactaaa acctgatcaa tctgatcttc cgaaccaacg
005401 tgtttgaaaa tatgcatgca cgctacaggt actatcaatt tgtccgtcct gaggcggcca
005461 atccaagaag caatggagga ggaggggatc agaacaacaa ctttgtgatg ggatggcccc
005521 tctgaagtcc aagcttgcta ataaaaacgc tggcgtgcta taatatatag ttcggcaaat
005581 gttgaaacac atgtgttctc agtatgtata tttctcccct atccggtggt actcttagca
005641 cgtacctatg agtgtatgtt tgtacgttat ctatactcta tgctaggcaa ccctatacta
005701 ttatggt
|
Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.
Update info.
