cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA
General information
RAP - Accession No. AK068990     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os01g0140100 ( IRGSP 1.0 )
RAP - Chromosome No. 1
RAP - Location, Length 2,119,489 -  2,121,320  ( + ) ;   1,832(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 2,119,489 -  2,121,320 ( + ) ;   1,832 (bp)

Related Rice IDs
RAP Locus RAP ID RAP Annotated
Accession No		 KOME
Clone ID		 KOME
Clone Name		 KOME
Cluster ID		 MSU ID cDNA
Accession No		 RiceXPro
FeatureNum		 Genomic Nucleotide
Accession No		 Genomic
Nucleotide GI		 Genomic Protein
Accession No		 Genomic
Protein GI		 RefSeq Genomic
Nucleotide
Accession No		 RefSeq Genomic
Nucleotide GI		 RefSeq RNA
Nucleotide
Accession No		 RefSeq RNA
Nucleotide GI		 RefSeq Genomic Protein
Accession No		 RefSeq Genomic
Protein GI
Os01g0140100 Os01t0140100-01 J013170M01 204667 J013170M01 4214 LOC_Os01g04710.1 AK068990 5188 AP008207.2 255672756 BAF03893.1 113531510 NC_008394.4 297598437 NM_001048514.1 115434441 NP_001041979.1 115434442


Chromosome: 1 ,  position: 2,119,489 - 2,121,320 bp

   Now loading


#
#
Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format 
000001 agctcaccac cagcagcagc atcagcagca atgcagcctc ccatcctcct cccgcttctc 
000061 ctcctcctcc tcctcctcgc cgccgcctcg ccacggccgg ttctctcccg ccgccacgcc 
000121 tcgccgccgc tcgccaccga gacgctcgac gtcgccgcgt cgctgtcccg ggcgcgggcc 
000181 gcggtatccg cggaggccgt gccgctccac cagtccgccg ccgccgccgt gtccacggag 
000241 gtcgtcgggg aggagcacga ggaggggcgc ctggccctgc ggctccactc ccgggacttc 
000301 ttgccggagg agcaggggcg gcagcggcac gccagctaca ggtcactcgt gctggctcgc 
000361 ctccgccgcg actccgcccg cgccgccgcg gtgtcggccc gcgcggcgat ggcggcggac 
000421 ggggtgagtc ggttcgacct ggtgccggcc aacgtcacgg cgttcgaggc gtcggcggcg 
000481 gagatacagg gccccgtggt gtccggggtt gggctcggca gcggcgagta cttctcccgc 
000541 gtcggcgtcg gcagccccgc gcggcagctg tacatggtgc tcgacaccgg cagcgacgtc 
000601 acctgggtgc aatgccagcc gtgcgccgac tgctaccagc agtccgaccc ggtgttcgac 
000661 ccttccctct ccacctccta cgcctccgtc gcctgcgaca acccgcgctg ccacgacctc 
000721 gacgccgccg cctgccgcaa ctccaccggc gcctgcctct acgaggtcgc gtacggcgac 
000781 ggctcctaca ccgtcggcga cttcgccacc gagacgctca cgctcggcga ctccgccccg 
000841 gtctccagcg tcgccatagg ctgcggccac gacaacgagg ggctgttcgt cggcgcggcg 
000901 gggctgcttg ccctcggcgg cgggccactc tccttcccgt cccagatctc cgccaccacc 
000961 ttctcctact gcctcgtcga ccgtgactcc ccctcctcgt caaccctcca gttcggcgac 
001021 gccgccgacg cggaggtgac ggcgccgctg atccgcagcc cgcggacgag cacgttctac 
001081 tacgtgggcc tctcgggcct ctccgtcggt ggccagatcc tctccatccc accctcggcg 
001141 ttcgccatgg acagcacggg cgccggcggc gtcatcgtgg actccggcac ggcggtgacg 
001201 cggctgcagt cgtcggcgta cgcggcgctg cgcgacgcgt tcgtccgggg cacccagtcg 
001261 ctgccgcgca cctccggcgt gtcgctgttc gacacgtgct acgacctgtc ggaccggacg 
001321 agcgtggagg tccccgcggt gtcgctgcgg ttcgccggcg gcggcgagct ccggctgccg 
001381 gcgaagaact acctgatccc ggtggacggc gcggggacgt actgcctggc gttcgcgccg 
001441 acgaacgcgg cggtgtccat catcgggaac gtgcagcagc aggggacccg cgtcagcttc 
001501 gacacggcca agtccaccgt cggcttcacc accaacaagt gctaagtcat tagcagcgat 
001561 ggcttaactt aattagccag atcaaggagt gattagtggt ggtaaatggt aattaagcgc 
001621 gagagtgtgt gatgtggggg tggggcccag tgccaggctc tgtgggcttt gggagagacg 
001681 aaaggcgagg acaaatgcca gcctgtcctg ctctctgctt gtcgatggat gggggggccc 
001741 actctcttct tctccggtgc tttgctgttt cgtctttgat gtctcggcaa agacgaatta 
001801 aaatgaatcc attccaatct gttcatgtgt tc

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Barley ESTs  
Acc. No. Clone Name Length
BY841830 baet63c03 396 view details
/rice/oryzabase