cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
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General information
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RAP - Accession No.
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AK069000
Link to RAP-DB
(
IRGSP 1.0
)
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RAP ID
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Os04g0271000
(
IRGSP 1.0
)
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RAP - Chromosome No.
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4
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RAP - Location, Length
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11,568,297 -
11,580,638
( - );
12,342(bp)
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Exon (Data source : RAP-DB)
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Exon 1
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Location |
11,568,297 -
11,568,940
( - );
644 (bp)
|
|
Exon 2
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Location |
11,569,867 -
11,569,969
( - );
103 (bp)
|
|
Exon 3
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Location |
11,570,053 -
11,570,120
( - );
68 (bp)
|
|
Exon 4
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Location |
11,571,288 -
11,571,367
( - );
80 (bp)
|
|
Exon 5
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Location |
11,571,759 -
11,571,852
( - );
94 (bp)
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Exon 6
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Location |
11,571,926 -
11,571,979
( - );
54 (bp)
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Exon 7
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Location |
11,573,759 -
11,573,837
( - );
79 (bp)
|
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Exon 8
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Location |
11,575,640 -
11,575,719
( - );
80 (bp)
|
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Exon 9
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Location |
11,576,170 -
11,576,278
( - );
109 (bp)
|
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Exon 10
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Location |
11,576,399 -
11,576,499
( - );
101 (bp)
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Exon 11
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Location |
11,577,993 -
11,578,112
( - );
120 (bp)
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Exon 12
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Location |
11,578,774 -
11,578,866
( - );
93 (bp)
|
|
Exon 13
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Location |
11,579,199 -
11,579,228
( - );
30 (bp)
|
|
Exon 14
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Location |
11,580,177 -
11,580,352
( - );
176 (bp)
|
|
Exon 15
|
Location |
11,580,579 -
11,580,638
( - );
60 (bp)
|
Chromosome: 4
, position: 11,568,297
- 11,580,638
bp
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Now loading
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Sequence (Data source : RAP-DB)
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Nucleotide
Fasta Format
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000001 ccgatcccca tctatcccgc gagcgagcac ggggcgccgt cgttcgccct gccgcatcag
000061 gtgagcacat cctccgccac agccgaatcc ccatccatcg cgcgagcgaa cgagcagggt
000121 cgccgtcgct cgtcctgctg cttccgccgc ttccgtcctc tttcccatct ctctctctct
000181 ctctctaccc acgccctttt tgtcgaattt gcgttaaccc tagcttctgt tctagaaatt
000241 tgccttaaac tcaatactaa taactgtttg atggttcccc aaaaagtttg ggggttcaac
000301 tgaaccacca tgtcctatgt tagatccgcc tgaattttcg ggagaagctt acttgattga
000361 gagatgtcac ttggctatgc cgagaagcta tcctaccgag aggatgtggg aaatgtcggc
000421 atgcctgaga tcttcgactc tcctgaactc ctccacaaga aggttggttt cacatgccat
000481 taaactttta cctccagttt gtggattctt tgcttcaggg tggcaagtta cgagggaatc
000541 atccatgggt tttgtatttt ttttgagcta aattatgtgg tcaaattgat tcttttaatg
000601 ggttttaagc atattttact ttagattttt ggacaaagtg agattagctt gaaatgtagt
000661 cactcaattc ttttttattc atcagtttgg gcattgacat ggtccataac cttttccatt
000721 ttatgattgt gaaaactttt aaaagtataa tcatgttgaa gtacttttgg taagaaatac
000781 gctaatacca ttttcatatg acaaatctaa atagctttac tggtaaaaaa tatctttgaa
000841 tgttgattac atgcattctg gtatgatgag tagaacataa tggagagtat actaaacatg
000901 agtgaactta gaagagagaa aacatttagc ctttgctgtt ttttaccctt agagctgtat
000961 gtgggtataa tgcagagcat gtgtgtgatc tttgaaagaa gagagttctt tattgtctac
001021 tcaaagttga tccctttaat gtcatttcct ggtggcaaat aagttgacac ctactgtctt
001081 tgtttggtgc ctgagttcta tcctcatctt ataatttgat catgaacatg ttagcataag
001141 ttatgctcgg ctccatgaca gtactgaagc aaaattgata tcaataatgg ttatggcatg
001201 gctccagcgc tcaaaatatc ctatcgcgct ggaaaatata ctaaaatgaa ctaatggctg
001261 tgaaatatct ggcaggcatt tgatctatcc tcttgtggct ttgtacactc catgttgtag
001321 tcaatatttc tatatactga taggggtgcg ccagtgaatt tatttcacat tttagacatg
001381 ttttaatttt tttactgggt tgttgtccag atagaagagc ttgcagtcat ggtgcgagag
001441 gtttgttttt cactgtgaat ctcaataaat tttgtaatta tgatttatat atatactcct
001501 ccgtttttta aaatatgaca ctgttgactt tttgagatac gtttgaccaa tcgtattatt
001561 taaaaaattc atgtaattct catttatttt attgtgacat gatttatcat caaatgtttt
001621 ttaagcatga cttaaatatt tttatatttg cacaaaaaaa attgaataag acgaatggcc
001681 aaacgtttat aaaaaagtca acaacatcat atattaaaaa aaaacggagg tagtatatag
001741 aaatttcaat gaattggtcc tgattgctgc agagtaagca tttggtggtg tttactggag
001801 caggcatatc aacttcatca ggcatacctg acttccgagg gcccaaaggc gtgtggacac
001861 tgcaggtggt actgctgttt gtgcagctat atctcacaat aggtcaatag ctctctttta
001921 atggactagc aaaatgccca tgctttgcta tgggtaaaac aaaatatatg atattgtcat
001981 agataatttt ttttaatcaa atatggtact attacttgct tgcttatttg aatactatta
002041 ctttagtata ttcacctgat tcaaacaaat attactaggc ataatatcag aaaaaatcag
002101 ggactaattt gtaaaaggtg taaaagtagt ggtgttggca gagccaccac cactactagt
002161 gtctgttaca gtagtataga tgaatttatt cttttgagat ggttttatga tgcttgattg
002221 caaagatgtg tctgcacata ctgaagtagt taagtaaatg cagtctattt tcaagtgcat
002281 gatagctgag tcttcgcttg gttatctttt aattttggta ccttaaattt atgctttatt
002341 attatttttg gattttttat atgccacgga acaggtttag gaaaaaggtt attgaatggt
002401 atttgaatgt tataattaaa ttttaaatat ttgcaattcc tatggattat agtatatttt
002461 gtgatctttt acatttgaat taatattatg acacagtcat ttacacatgt tgcatatgtt
002521 gtctagcgtt caggaaaagg tgttcctggt gcatcactgc cgtttcaccg agctgttcca
002581 accttgactc atatggcact ggttgaattg gaaaaaacag gacgattaaa gtttgtcata
002641 agccaggttc atatacctaa ctcaagttgt atatactgca ctttgaattg gtacctatgt
002701 acaaaaccag tctctacaac tactagtata gttaaatcag ttcgtaggag ttgcagatat
002761 tgactgctca cttattgtag tggtaaggtg ttaggatatt gaaatcaaca cgcaatacaa
002821 ctgttacaga cttggggctg cgtgtcccat gggcatgcca cgcatcatgc cagcagtagt
002881 gatttgtagg aaaggcaccc cacaactagg aagcccttac aattaaagga cattcagtct
002941 tgtaaatatt gagcgcaatc acagcggagg aggccctgca gttaaatttt attgaaaaaa
003001 atatttgtaa atagtacaaa ggaaaattac aaggatctaa gccaagattc taaaagatct
003061 ctctctggtc tttttagttt taaaagaaga tcctctttaa aaagactttg ccaacatgaa
003121 aaatgaggga acgctgcttc caaagattag atcatttcac tgcttccata tattctatgc
003181 tgtataaagc accttttcaa tgaagcacac ttgctggtgt tgtgccttag ctgtgaattg
003241 tgatcattat gttattgaaa ctcagggatg tatcccaggt tatccctatc ttgccccaac
003301 attctcaaaa aaaatgcaaa caaatttctc ttactccaat gttgcacaag acacaaagaa
003361 actcacttta atcttgtaat ttgccaagtg aacgtgaaaa cccttccatc tatctcattc
003421 ccaggcttag ccttagggtg cattcgtttc tgaggttggg gggaggtttt cagctacatg
003481 cgaaacgaga gctcattagc aaatgattaa ttaagtatta actattataa acttgaaaaa
003541 ttgatttatt tgatttattt aaagaaaatc ctatatagaa actttttgct caaaacacac
003601 cgtttagtag ttcaggaagc atgctaacgg aaaatgagga agttgtttgc agttgccgct
003661 taggactcag cattagttct tttctgatta ttcacctgat tattgaaaca gattatttgc
003721 tccacgcttc gaaaaataca ttttctcaaa aaattctttt actgaatttc ttagaccact
003781 tattttaagc tatttattaa gttaatttat caatatttac tttatcccta aaattaatta
003841 gataatcggc agcaacaatc cactcaataa tctgtttcaa actaagcctt agccttgtaa
003901 tgaccatcgg catggaagag cagctagcac cgaagaccga gtatgtttct atctctccgg
003961 tcactaatac caataactcc attttccatg tttgacaaac ttcagtacta actttgttgt
004021 gttttaaatt taattacaat gttctgtcgt gtgatgaaca aattgatttt atcacgatca
004081 agcttatggt atttatgaaa cttaagcttt cacggagctg atggagttgt ctttgccaga
004141 atgttgatag cttacatctc cgctctggcc tcccaaggga gaagctggct gaattgcatg
004201 gaaattcttt caaggagatc tgcccaagct gtaaaaagga gtatgcttta gcctgcttta
004261 cttgactata ctttatctgg gactataaac accaaaatat ttcctttttt actgtggtgg
004321 tttatttaat tggcttattc cagatcccac ttgtttgaag gtaccttcgt gattttgaaa
004381 ttgagacgat aggactgaag gatactccaa ggcgttgttc tgataagaac tgtggagcta
004441 gattaaaaga cacagttctt gattgggagg tacgtttcaa atgtgctgga cttaagttat
004501 atttatattt ctttgttagt gggccatact tgcttagccc tttagcccat ctgcaacaga
004561 ttcttgcttt tgtgtttttt ccaaaaattg ccaaggtggg tggttcattt gttggcaatt
004621 tggccataaa agctggcttt ctccatttca acacaaatca aatttacaaa caatgcatgc
004681 ttagggtatt cactgtgaaa agctttaagc tgttttacag actattatgt ttttcttacg
004741 actagtattc aacatgatat cctctgtacg ttcactataa caagaaaata aatagagaag
004801 ttggttagtg atgtgtttgc cttgttatca gttaagtagt ggtgttctga aatgctatct
004861 tgttctcatg tcttcgctcg ctgatagaca atgaataagt gggtaaggac attttgcagg
004921 atgctttacc ccctgaggag atggatgctg ccaaggagca gtgtcaaaaa gctgatcttg
004981 tcctatgttt aggaactagg tattggccat ggtacctgta cacactagct agaattgctt
005041 tcacgtggtt ttatttcatt actgaaatta gtgtgtttac acgcaagttc tgtgattcta
005101 tctcctgcaa acttaatttt aagaatttgg tacttccgta cttttgcgaa tggcggtatt
005161 ctggtgtgat gtgatatcat tgtaaatagt ggcaaacaaa tagctgtcac atcattgtgt
005221 agaaaaagtg gcaaacaaat agctgtaatt gcttttttag atggcttttc taatactttt
005281 aaattaggga aatttgccat gtacaacttg gttctagctg tttaataaac atactattat
005341 agaaaagatt ggacccacaa ataccacaat agaaccacat agtgaccttg ttcaccagta
005401 tatggattta tggatgtcaa gttggactac catagcaggg gaaatatgta ctggaaacca
005461 catatcaggt gggtggacga ctgccaggtg aacgtccata ttgttcctgc caccgttgcc
005521 tgatccaata cattacctcc tttctcaaca acattttaac tttttaagaa aggatgactg
005581 tttgctttta ttattatttt tatttttgta aaataaatgg aaagaacatg ttcgatactt
005641 ctgttaactc cacagcaggg gcatagttat gttgggcaat tggctgtctg ggtgaggata
005701 actttaggat tactattcaa aacacacctt aaattttgaa ttctatacta aaatgtggta
005761 cagtttttct atgtttgaac tggaagatca atggctagac aaatatttct ttgtattatc
005821 tttatgttag aaaattatta cctgatcaaa tatgcacttg atgacatgtc ataaactacc
005881 atgtagttct tcaataattg ggatccattt actctagatg catggaagtg tgggttttgc
005941 atactgctcc ttttatggaa tgcttggcac taggagtgag ccccatgatg ctgcaaaagc
006001 agtaaaagca tgtgtatatt ctactctaca gttgcacaaa tatggacatg taacacaaga
006061 ctcaatattt cctcataatg cctatgtgac atcatggact cattgctgta agacaagaag
006121 tattccattc actaaatcat ctcaactttg aaaaacggat cattccatga ggagtggtag
006181 gtcggtgttg tagtgtctct taaggctatt gtaaattggt ttgtgcatcc atagcatagt
006241 gagtcatctg ggaatgcttt ataggtggga gctgtaatct ggattggtcc atagccagat
006301 tcagggctca gaaaaccagg gtaacttgct ggttagcacc ctgcaaacct tcaatcgggc
006361 tggttcattt tttttcctaa tctgagcagt tcacgcttta ctactcactc aaattaactt
006421 cagttggaat aggtacatat aggcttctaa tagatttttc tcgagaatct taaaaaaaaa
006481 acttaaaatg gttttcgcct aatacttgcc aaccagccaa gttccaattt cagtactgat
006541 tctgttatct caaaccctgt tattaatatg ttatgcagct gcttgctttt gatttgttaa
006601 aaaatcaaag gagtgatctt tgacttgtct taatgaactg atcaaaatcg ctttgatatg
006661 aattcattag taatgctctt gatataccgg taaccattct tcaatgccct aactatttga
006721 catttttgtt taacaacttt atgttaataa cgggtgatgt ctctttgtcc ctatcctttt
006781 ctgatttcca ctactgtgca gtctgcagat tactcctgct tgtaatatgc ctctgttgtc
006841 actgaagaat ggggggaggg tggctattgt aaatcttcag gtacgtgcaa ctaaataaca
006901 atattaagtc ttgagaagca ctaaattgaa tgcacgttat ggttcttcct tcgtaaggtc
006961 tttctatgta gcactaaact atgactcaac tcatggatgt tagtatttat ggctacatat
007021 aaattattaa aatatctttt ggcatgtttt ggaaatttca agtttgttat atggctgttt
007081 ctttatgctt ctgacaaaat ttgtagtttg tactgcttca acttgtatac ttagacttgg
007141 ggtttataat tggattcctg atccattata aagttagaaa ttgcaaatat ggtatttaca
007201 tgcacatggt gtacaattga tgcaactttt gctctctcca tttttgaata tttgcattct
007261 aggttaatat tttgttccca gatataaatc atactatcac ctcaagacaa ctttttactt
007321 gtctgtccta tatacccctt ccttcataat gcaatgttat ttgaatttta ccttcccaag
007381 cataaccatc caaagggcat ttactagtat agacttaatc aggttatgta caatccaaag
007441 aaccataaat acatgctttc catccatatt tctcaaatat tcgattacac atgctcatgg
007501 gttcattcat gtgctagttt tgaatgtgca gccaactgtt catttcaaat aggcatatga
007561 ctgagctaat gtcacaaccc aaggccatgg cgagataacc accgccggga ggataactgg
007621 gtggcgtcgg ctcgtggaga agggatgtag atttaggcta gggagaagaa cattacggga
007681 agggagatat tagactaatt gatattcatt gcttaattga taatagacat aatcccatcc
007741 ttttatagat ggtacaactt gacccctaag taagattcaa tcttatctta tctctaactt
007801 aactggtatg ggctatccat gggccttggc ctcatgacct aatgcccgtg acagctaatg
007861 aatgaattaa atgatgtttt gccatggctg catggagcca tattagacgg agctatatga
007921 gacatggtgc agtaggagtt atcacacagt aaccagcaga ggtgttatgc cagttaaagg
007981 caggagagag ggcgagtaag ttagaattta gagaccagtt attgctttat tatatatttt
008041 ggttagttat tagttgcact tgcacaagtt gttaccattc ttctttgatt tggagatgcc
008101 taggacagaa ggttattgtg acacactttt gggtaacaag gaatgatgga ttctagtttt
008161 cctctattct ccaatacagt ctagtgcctt tagctggtga ctagtggttt ggaagagctc
008221 ctggctggct gaatggttga ccaagggcca gagccctaat tctaatctcg gtcttcagac
008281 cctaacccta tgatgctcat aacaatgaag acaatttggt cttttacaca ggtgtcttgg
008341 ctgatgagca aaattctaat acatcatcta ttaaggattg gagggagtag tttttaaaat
008401 gtgaaatcta ctaagtggtt atacttccag aattttcaaa atacaacatt ggtcattttg
008461 ctcatcttaa aaaaatgagc cttttaatgg tcaagattgt aatataataa ttaataaaca
008521 tagattacat tgtcatatat ggatatatgt atatttgtaa tgtagataaa tattgaaagt
008581 ttacaatgac atgtgataaa tccccaaaag agatgcagac agatattttt ttttcatttc
008641 ttgtctcctt cgtattcagg caactccgaa ggataaaaag gcaagccttg tcattcatgg
008701 acttgtggat aaggtaggta tgttagtgag tttcatttgt ttctatttca tccccttgcg
008761 gtagctattt aaccgtgtta gtgcaggtca ttgctggggt tatgtatatg atgaatctgc
008821 gtatccctcc atatattcgt actgactttg ttcaaattag tctccggaac tcggtcaaaa
008881 gtacgatcat ctcaccatct ctcgcattgt cattcttatc tagttttgaa cattgctttt
008941 agttacgtac aacaaactga ggttagttaa taaagctgaa tactgttatc attaaagctg
009001 tatcattagt tagatgttga acaacaagaa ttatcaggtt atttcgaact atagtctcaa
009061 tatcataggc atactaccaa atgtgataca cggttatttt atgttgtgtc catccataaa
009121 taatagtatt ttttcatagg atcttcctta gcaattctcg gtatcatctc aacaactcga
009181 tggacaaaat gatattttag cctgttttat cctagaagat agatttgaat tgcttattaa
009241 ctcaaaccgc accactgctt ttgttttgca gaaaaatgcg tgagatggac tctccgagta
009301 acaagcattc atggcttgcg agcacctttg ccatttcttc gatcagttga ggttgtgcaa
009361 ttatttaact gatagtacat caacatactc tttgatcaat cgagaacaaa tagattatgg
009421 atagctactc cgttctcatt gtagacttat tcataaggat aaaaagggta gattaaatga
009481 aattttggcc attcatttat accatgttgg agaagaaaga tcatttgttt atgactgaga
009541 gcatttgttt agcaatggca agcaaagttc taaatagcat atagcagggt catagcagat
009601 tggggttgat atagaggcta gcgggtagag ggtactatat tccagtggtg gagttaaaaa
009661 gaaaaactct agattagatt ttgagttatt catgaatata ctcatgactt accttacctc
009721 aacatagtaa aatagtgtac gcaagtttac aacacaagga aaagataaaa atggacatgt
009781 attatgctaa tttataacaa gccaacaagg tgttcaaatg aacaatcaac acaactcagc
009841 aaggtaacac aaattcaagt ttcaaatttc attctaatat tgcaaactta gtagacaaac
009901 aactttcgga gaatgaactc tcacattagt ctattttgct gtaagttgta gtttcatggt
009961 tgttaaggcg ttcgccttag tgttcctaag gcggcaaggc actgccaggg tgtaaggcgt
010021 ccgctccgcc tcacgttgcc tccgccttgc gggaaaaact agaggacaaa ggcaaaatca
010081 aggggataaa ccggtcctgg agaagcaggc ggtagtaggg gaaggggtag gaatgaaaag
010141 agctgaccta catcgtcgtc gctgacgtcc ccaaccaccg gcaaagccag atccactctt
010201 agaattgtgc attactctag gttagaggca taaattatct tcgaaataga aactagtcac
010261 taaaagtaga ttgaacagcc atcttgaaat ttctagactg acatatttgg gaagaaaata
010321 gcaagaatga catgtatcta gtgatggtag aagtatattt tagtagctga tactaacaaa
010381 accagtcatt ttcttctgaa atagcatgga tgttagaagc taattctcaa attaccaaat
010441 atatatgtgt aaaatatttc tccattatat tatatggata tagtgatata tgattaaact
010501 attctgactt accaacaggt ttcctttcct gaaagacctg acatgaagcc tgtagtacta
010561 aaggagcaac cattttcttt gcagaggtat gttggagcat tcaaagttcc cgagtagaca
010621 tttgaggtct gtggcatatt tcacaacagg acacttgtta cttttgtaga gaaacatcaa
010681 tgaatagacc gtttgtcatg ctattgacat tcaactttag tgatggttgc ggctgttcga
010741 gctcttccat tgaatggcct gttgattttc tggtaaggag attctggcaa accttcatct
010801 tcaaatttct gttgcctgca gttggcaata tgttagaacc tccaattgaa ctttattttg
010861 tgtagggtgg gaccaataga attttgttca ggcatctgtc taggtggtga tggttgacgc
010921 tagatagtat ttgacttttc ctatattttc gagttttggt cttattatga gaaatagcta
010981 catagtaccc tgctgttcat atggactgga tctgtattgt tgtaacgtgc taagcattgc
011041 atgcattaga aactcgattt cttccatttc tgatagcttg ccaggtgctc agaattggcc
011101 aatttagggt gtctcatcac tttttcctgt ttctgtgatt tttcagcaat actttgagtc
011161 ttagtcttct cccatcccat atgactgtta acatcatctt agggtgtgat tgttttgagg
011221 gtgataggat ggggcgatcc atagtttttg gggcgatcta tgttagatgt tttggttggg
011281 tggacgggat gagccagtac cttctgactt ggattgggaa ggcctgtaac tggttgtgaa
011341 gcaggaactg gctgtttttt ttgccttttg ctttattcct gcatatgtga caaatagata
011401 aatcatacaa tgaaccaagc tgttatgata ttcaatacgt gctaaaatat actatactgg
011461 taacatgaag aggacacctt tttgttcttg ttccttccga tgaacttgaa gtgatggatt
011521 agccatagaa atagaagtta ttatgcattt acttctgtcc tcagttaatt tgtaccttct
011581 gcatattatc ctcttaagac atgcataaaa tcagctcaac gtgttaatta acatcattgc
011641 atcagataca cgtctttcct taccatattt ctcacttctc aaaaatgtca ttatacagaa
011701 gcaaaaagac agctttgtca gggatagaag tctagtcctg caagagttgc aacatgctgc
011761 agagcatcga tcacgtgcag ggcagcatgc aattctggag agggagggtg tgccaagagc
011821 tgaaacgtca attcatgcac ttgtgaccaa catcgtcagg tatgatactg aagatagcaa
011881 ggcggcagtt cccatggcta catggatgaa cagcaacggc agcctttcga aacggcatat
011941 ggatgccatt ggttgcaacc cagcatcgtc aaaaaagcag aagttggttg ctactcgtca
012001 tcggcgaaag ggcttgaacc ctgctactca gaaagtttga tggctgtttg ttctagttgt
012061 cagactagag ttaggataga tgcatgagat gttcacagta gctagagtaa ggtgttaaca
012121 acttctagtg catgtgaaag ctggtagaat tttaacttga caagcccaac gtaattcagc
012181 aaccatctca aaagaaactg gttgtggggc ttgatggtat gttttgtaaa gctcgggaag
012241 atgaacaaac ctctaaatca ttaaggatga tctgaggaac tggaggtaaa gtgaaccgta
012301 caaagaaaat aaatggaagg cgagacaatt ttttattgct gc
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Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.
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