Update info.cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
| General information | |
|---|---|
| RAP - Accession No. | AK065036 Link to RAP-DB ( IRGSP 1.0 ) |
| RAP ID | Os04g0432000 ( IRGSP 1.0 ) |
| RAP - Chromosome No. | 4 |
| RAP - Location, Length | 21,637,324 - 21,642,782 ( + ) ; 5,459(bp) |
| Exon (Data source : RAP-DB) | ||
|---|---|---|
| Exon 1 | Location | 21,637,324 - 21,637,410 ( + ) ; 87 (bp) |
| Exon 2 | Location | 21,638,087 - 21,638,114 ( + ) ; 28 (bp) |
| Exon 3 | Location | 21,638,203 - 21,638,256 ( + ) ; 54 (bp) |
| Exon 4 | Location | 21,638,362 - 21,638,454 ( + ) ; 93 (bp) |
| Exon 5 | Location | 21,639,008 - 21,639,100 ( + ) ; 93 (bp) |
| Exon 6 | Location | 21,641,811 - 21,641,915 ( + ) ; 105 (bp) |
| Exon 7 | Location | 21,641,999 - 21,642,097 ( + ) ; 99 (bp) |
| Exon 8 | Location | 21,642,183 - 21,642,782 ( + ) ; 600 (bp) |
| Related Rice IDs | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| RAP Locus | RAP ID | RAP Annotated Accession No |
KOME Clone ID |
KOME Clone Name |
KOME Cluster ID |
MSU ID | cDNA Accession No |
RiceXPro FeatureNum |
UniProt Accession No |
UniProt Entry Name |
| Os04g0432000 | Os04t0432000-01 | J013001H09 | 200332 | J013001H09 | 325 | LOC_Os04g35240.1 | AK065036 | 1692 | Q7XQP4 | SAPK7_ORYSJ |
Chromosome: 4 , position: 21,637,324 - 21,642,782 bp |
|
|
Now loading |
|
|
|
| Sequence (Data source : RAP-DB) | |
|---|---|
|
Nucleotide
Fasta Format |
000001 tgagtgctca tcaatccagc ccatccccct gctgctgctg ctgctgcttc gctgagacga 000061 cgagaggaag aagacgagcc cccaagccaa gcagacgcct cctccttctt aagcttccca 000121 attctttctc tttccctcct cctccgcctc cgcctacgcc ttccccgcta gtcccacaca 000181 tccggcgaag attccggaag tttcgtcgat cctccgatcg atcaagcggc gagcggcggg 000241 aggcatggag aggtacgagc tgctcaagga catcggcgcc gggaacttcg gggtggcgcg 000301 gctgatgcgg aacaaggaga ccaaggagct ggtcgccatg aagtacatcc ctcggggcct 000361 caaggcgagc cttcttcgct tcttcttctt cttcttcttg tcccttttcg tccgctctgt 000421 tttcctgatc gatcgatggg tgtggggcgt tttttttgct cattcgggtg gtgatctgat 000481 ctctgcagat tgacgagaat gtggcgaggg agatcatcaa ccaccggtcg ctgcggcacc 000541 ccaacatcat ccgcttcaag gaggtgaggc cgtggcgggg ggcaaattgg gtgttcgccc 000601 ctgttcgtcg cgtcggtggc gaagaatctg tttgtttttt tttcttcttg tgtgtgtgtg 000661 tgatggaaga atcgtgcctt gcgatgcagg tggtggtcac gccgacgcac ctggcgatcg 000721 tgatggagta cgctgccggc ggcgagttgt tcgaccggat ctgcaacgcc gggaggttca 000781 gcgaggacga ggttcagcga tgctcgaatc gactctaatc aactccattt cttggtgagt 000841 tcttgtgcta atccgcgtga gaatggtggg cttttgcagg ccaggtattt cttccagcag 000901 ctcatctgcg gcgtgagcta ctgccacttc atggtaagaa cagaaaaacg atcccagtaa 000961 acattgcatt ctttttttaa aaaaaaaagg atgggaaagt gttcaaatgt gaaattatta 001021 ttcgtgatgg attcgcagca aatttgccac cgggatttga agctggagaa cacgctgctg 001081 gacggcagcc cggcgccccg cctcaagatc tgcgacttcg gttactccaa ggtagggaga 001141 aggccttctt taaccttttc ttgaatacag taatcttttc cctcgaaacc tgcctcaaca 001201 cctcttttcc ctgcccggat ttcttctaga aatggacaag cttttctttt ttcccttgtc 001261 aaaaagcact ctatttttaa atgatctata gtcgatttaa ttacctataa atatatatta 001321 cactagtaat atttgatctt acctgttata catacatttt aatacataca ttttaatata 001381 tgctacagct aactataaat aaaatttata gccggttact tttctctttt atcatttatc 001441 ttcggtttat agttacctag tctcaaaaga tcaaaacttt ttcttcactg tttcaattca 001501 ctcccccaag aaacgccatt gcttgcaaac gttttcttct acaaatgcta aaaaaaaaaa 001561 aaactcctat gtgctttctt gcctaatttt ctcccccttt tcttacgcgc aactgcctaa 001621 aagaagcaac attttcgctt tgatcgcaac atgacgcctt ttttgtttct tctcctcgtc 001681 gcagtcgtcg ctgctgcact cgaagcccaa gtcgacggtc gggacgccgg cgtacatcgc 001741 gccggaggtg ctatcccgcc gggagtacga cggcaaggtc agtcacgccc attcgcccat 001801 cacttcccct tgtcatctgt ggcatggtgg tggggcccac tggcagtggc ggtagcgtgg 001861 ggcccacctg ctcctggtcc tcagcgctga gcacgtgccg tcccctggga gtccacgtat 001921 cgcggttctc aaggcaaaca ctaccttgga ccgtagaccc ggcctatggg cgagctgggc 001981 agcatcggaa agtgggtccc atgtgtctgt gagtgttggg tctatgggct actatgggct 002041 agggtccatg gggggggggg acaggtgcct ctgggtggtg gatttgggat ttgtcctcta 002101 ggagagcggt ggagatttgc ttgcctgcgg ccggacagac gcccactggg ctgtgggccc 002161 gggattgttc ttagcccggg cccacacact gcctcgtgat tcgtgacagt agtagtacta 002221 gtacatgcta gacagtgtgt agtagtacgc gctaaacagg ctgtgtgaag gggccctgag 002281 accatatgct gctgactgtc actctcagtt cagctgagtg tgttttgctc aaaaaaaata 002341 gaagaagaag aagaagaaga agaagcttga gtgtgtgttt cttgctgcag ctgagctgag 002401 ctgctactgt agtgcattag attcccagct aatgatgctc cctccagtag tggtagtaga 002461 actccagtgt tttttgttga aaaatctctt ctgtaaaagc aagggaggga ttattcaaaa 002521 ggacaggttc cttccttttg tgtgtgtgtg atgtcgatct agacattcac attctctctc 002581 ggtttttttt tcggtaatca actaatcaca catcacgctt gatggggatg ctcgcttcga 002641 cgaggcgtgg cggctgcttt aacagcacgc cagacacaaa agaggagggg gggagaaaag 002701 acgggttgat cgaattcgag acggttttag tggtcaagag tttgcaccct gtagcttgtt 002761 acgtgccccc acttgttgct ttattaaaat gtggtggcct gaggtaaagt gagattagcc 002821 ggtgatggca tgagattctc cagggtacag atgcgagata ttttgcttct cgcccgattt 002881 gggcagggtt aaaagttcgg attctttgta tgtttggttg tccagtgtgt tttggcgagt 002941 gaagtaacgg agtgtgattt tgtctttagt tacatgcaac gctaagaaag gaatgatttt 003001 tcatcgtttg ggattgaaat ggaacagacg tgtagggatt aggtgaattg tgacaggatc 003061 catgaggtag acgcacccct cagtctgtat ttgcagttat gcatgtcatt cggttggaca 003121 gcttgcaatt tttgttgaca tctttttggg ttcacctcat actttatgtc cttttctgag 003181 cttttttttc catcatggtt ctagtgctac atattagcta attgacgtta tcacaatggg 003241 ccctcggacc caatcctttt caggtagaca tgttagactg aacttctctt tggccttttc 003301 tgtggttatt aattttctct ctctccttgg tgtcagttac tgccgtcata tcttatgaac 003361 gattttcttc aggacagtga ttgcattttg ttccttccct atataataca tctactcagg 003421 ctgcttagat ttttcacgct gcaaaattgg ttgcttttga ttgacaaagt ggacactgcc 003481 atagataatt tgtagatgga atatcaagaa acattttatc atttgcatct agatgttctt 003541 tttttacaac cataatgtgc ccttgatttc aacaacctat aatgcttatt tccgagttat 003601 agagttatgt atttttcagc tgatttgttc ccgtcatctt tagactgccc tcaaccacct 003661 gttttttatt tgaattaatg ctggaataat ctattgcata aagaaaaaaa accactgttg 003721 taccgctttc caaaagatta ctggatgcgt atgtcctata acagtcatgg ttgttagcct 003781 acttagccat taggtgagaa agcacaaagt gccccacagc aggtaaatgt ctgtgggggg 003841 aatatgtaat taccgaagga catggatcct ctgagatcat cttttctatg ttctcatgat 003901 aacgccacca ccctaataac gaatgtcaat acttatgctt accataggtg tgttctgtca 003961 ttacctgttt ttatctttgc tttagtacat aagcgtagca ctgatgcttg tctgcctttt 004021 gaatttaggt tcatggaagt gcacgtcatc tttcctatca ttcagtttat tttgtacaga 004081 agttagcatc cattgtgaac atagctgaaa tttgcgtact tcggagagtt ttgatatttc 004141 cacgcttcta tttggaactt tgagcgtact aaacataagt gacagcatgc tgtgcagaaa 004201 ataaaaggag ccaatcaaat agatgtgcta aatggtgtaa tagagccttt gatttttgtt 004261 tcttggacca ttttaaatta cagagattat tctgaaatgt tttgatgatc gaaacaagca 004321 cgattaatgt tctacaggct gttctgcctt aatattctac tagaaagaag tgtactttca 004381 tacatcctgt tcttgcttgt atttatcctt tcatttgttt ctatcttatc tcctgaattc 004441 atttacttgt ctcctaacat ttttggattg gatggttgat gcttcagaca gccgatgtgt 004501 ggtcttgtgg agtgactctt tatgtgatgc ttgttggtgc ttaccccttt gaggaccctg 004561 atgaccccaa gaatttcaga aagaccattg gggtaacaat ttaagaactt ttcagctaag 004621 cattatcaga tcacaacttc tagtctctta tgctttgtgc attttttgtt ctcagagaat 004681 aatgtcaatt cagtacaaaa tacccgagta cgtccatgta tcccaggact gcaggcaact 004741 cctttctaga atttttgttg caaaccctgc aaaggtacta ctctatttaa actcagatca 004801 acttactaga cctattcatg atttttttaa aaaaaaaatc attcccaaac ttcatacaga 004861 gaataacaat aagggagatc aggaaccacc catggttcct gaagaacctg ccaagagagc 004921 tcacagaagc tgcacaggca atgtactaca agaaggataa cagtgccccg acctactccg 004981 tccagtcggt cgaggagatc atgaagattg tcgaggaagc gcggacgccg cctcggtcct 005041 ccacccccgt ggccggcttt ggctggcaag aggaggatga gcaggaggac aacagcaaga 005101 agccagagga agaacaggag gaagaggaag atgctgagga tgagtacgac aagcaggtga 005161 aacaagtcca tgccagtggt gagtttcagc tcagctgagt atttctgtcc agcagcacag 005221 gaagattgca aactggagat attgtcataa tgtggcagct gatggtcaca ctcccattct 005281 gtagtttgca gtcttgtttt tcttttttca gtttcatttt ttcttttctt ctctttgatg 005341 ctgcaacagt gtaaattacc aaagtggttc tgtcactgtc tttgtaatga ctgatttaag 005401 ttagcatgca gaaacataat gtattgaata aaaccatctc attgagcatc ttctttctc |
Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.
| Hit Barley ESTs | ||
|---|---|---|
| Acc. No. | Clone Name | Length |
| AK250358 | FLbaf78p13 | 1552 |
| more... (Total Hit Count: 5 ) | ||
| Hit Wheat ESTs | ||
|---|---|---|
| Acc. No. | Clone Name | Length |
| CJ681080 | whok2p06 | 760 |
| more... (Total Hit Count: 72 ) | ||
