cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA
General information
RAP - Accession No. AK063682     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os04g0589800 ( IRGSP 1.0 )
RAP - Chromosome No. 4
RAP - Location, Length 30,311,116 -  30,311,824  ( + ) ;   709(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 30,311,116 -  30,311,824 ( + ) ;   709 (bp)

Related Rice IDs
RAP Locus RAP ID RAP Annotated
Accession No		 KOME
Clone ID		 KOME
Clone Name		 KOME
Cluster ID		 MSU ID cDNA
Accession No		 RiceXPro
FeatureNum		 Genomic Nucleotide
Accession No		 Genomic
Nucleotide GI		 Genomic Protein
Accession No		 Genomic
Protein GI		 RefSeq Genomic
Nucleotide
Accession No		 RefSeq Genomic
Nucleotide GI		 RefSeq RNA
Nucleotide
Accession No		 RefSeq RNA
Nucleotide GI		 RefSeq Genomic Protein
Accession No		 RefSeq Genomic
Protein GI
Os04g0589800 Os04t0589800-01 001119E08 106683 001119E08 12394 LOC_Os04g49980.1 AK063682 34511 AP008210.2 255675107 BAF15615.1 113565272 NC_008397.2 297603645 NM_001060236.1 115460201 NP_001053701.1 115460202


Chromosome: 4 ,  position: 30,311,116 - 30,311,824 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format 
000001 aaaacacgtc gcaagtcgaa gcacaaaacg caagcaacga atctcaatcc acaggctcac 
000061 actgatacgc aacgcacgta gctactgtac tgtaggagca aaagaaaaga aaagatgcag 
000121 acggcgaagg tgaaggtgca ggacatggtg agcggtgcca aggagaaggt gaaggagggg 
000181 acggccaagg cgcacggcaa ggccggccag gcgacggcgg ccacgcacgg cgagaaggag 
000241 atggccaagc aggaggagaa ggccggcaag gcacaggcca aggccgacga gcaccaggag 
000301 agggcggagc accgcgccaa cgccaccacg ggccgccacg gcacgcgcgt gccgcttacg 
000361 gccggcggca accgccacca ccacgctccg gtcggcggcc ccgccgtcga ccctgcatac 
000421 ccggccgccg gcaccggcac cggcaccggc acgtacgcgg cgtccgacaa atcgtacatc 
000481 tagatttggg gtagatggac atgggcgggc ttgatcgatc tggatcgcta gtgtgttttt 
000541 tttcagtgta gcgagtgatc tggtcccagc ccggccgctg atcgtgttag cttgtgttcg 
000601 tacgcacgcg tgtatgctgt gtgcacatgc gtgtgctgga ataaaaagtg tcagatgtaa 
000661 aattaacatg cttgatgtag ttctgttcaa tgaaagggct ttcgttttc

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Barley ESTs  
Acc. No. Clone Name Length
BY837928 baet132f06 414 view details
Hit Wheat ESTs  
Acc. No. Clone Name Length
CJ534143 rwhec9e05 326 view details
/rice/oryzabase