cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA
General information
RAP - Accession No. AK059734     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os04g0673300 ( IRGSP 1.0 )
RAP - Chromosome No. 4
RAP - Location, Length 34,875,166 -  34,876,280  ( + ) ;   1,115(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 34,875,166 -  34,875,624 ( + ) ;   459 (bp)
Exon 2 Location 34,875,729 -  34,876,280 ( + ) ;   552 (bp)

Related Rice IDs
RAP Locus RAP ID KOME
Clone ID		 KOME
Clone Name		 KOME
Cluster ID		 MSU ID cDNA
Accession No		 RiceXPro
FeatureNum		 Genomic Nucleotide
Accession No		 Genomic
Nucleotide GI		 Genomic Protein
Accession No		 Genomic
Protein GI		 RefSeq Genomic
Nucleotide
Accession No		 RefSeq Genomic
Nucleotide GI		 RefSeq RNA
Nucleotide
Accession No		 RefSeq RNA
Nucleotide GI		 RefSeq Genomic Protein
Accession No		 RefSeq Genomic
Protein GI
Os04g0673300 Os04t0673300-01 101768 006202B01 8152 LOC_Os04g57720.1 AK059734 949 AP008210.2 255675107 BAF16145.1 113565802 NC_008397.2 297603645 NM_001060766.1 115461261 NP_001054231.1 115461262


Chromosome: 4 ,  position: 34,875,166 - 34,876,280 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format 
000001 attgcaaccg caaagcctct tctcctcttc ttctcctact cgcttactca atcgctcgag 
000061 gattcttgga ttggattatt gggttggatt ttgagttgat caatggcggc agcggcgcag 
000121 gctccggcgg cggcgaaggt ggtggtggcg acgtcgccga gggcaggcgg aggcggaggc 
000181 ggcggcgggg acaggaaggt ggtgccggtt gtggtggcgg cggcggccgg cgacgaggcg 
000241 cagagcgaga tgcacgtgct ggcggtggac gacagctccg tggaccgcgc cgtcatcgcc 
000301 aagatcctcc ggagctccaa gtacagggtg accacggtgg agtcggcgac gagggcgctc 
000361 gagctcctct gcctcggcct cgtccccaac gtcaacatga tcatcaccga ctactggatg 
000421 cccggcatga ccggctacga gctcctcaag cgcgtcaagg taatttaaat tcgattcgat 
000481 cgaattatcg cgatgatcca tgtgaatgtg gaacccccaa tttcttgaga ctgaatttgt 
000541 ttcgtgtgtg gttcttgctg caggaatcgt ctcagctcaa ggagatcccg gtggtgatca 
000601 tgtcgtcgga gaacgtgccg aaccggatca gccggtgcct ggaggagggc gccgaggact 
000661 tcctgctcaa gcccgtacgc ccctccgacg tgtcgcggct ctgcagccgt atcagatgat 
000721 cgctcgctcg ccatgttgga tcatggagag gatgattaac tcctaggatt ttttttggtg 
000781 gctttctcaa ttcttggaca tagttcttct tcttctgctg ctgcctcaaa caagaagcta 
000841 aacatttggg gctttaggag atgattagcc ttactgcctt agcaagttag aattgaaatt 
000901 aggtgtcagg catttgcttg ttcccctgtg tgctctgcaa agacgccatg aaaaaaaaac 
000961 agagagagaa gagattcttc tgaagcttct gttcaggagg tttctcttgt cacaatgttg 
001021 aaatggcacc agagcatcaa tctgttcttt ttaactgttt caagatcggt cagagttttg 
001081 acattaattt aagtcttgcc aattaaccat gcatc

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Wheat ESTs
Acc. No. Clone Name Length
CJ952747 whchul36o14 702
more... (Total Hit Count: 14 )
/rice/oryzabase