cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA
General information
RAP - Accession No. AK059136     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os04g0398300 ( IRGSP 1.0 )
RAP - Chromosome No. 4
RAP - Location, Length 19,904,288 -  19,904,716  ( + ) ;   429(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 19,904,288 -  19,904,716 ( + ) ;   429 (bp)

Related Rice IDs
RAP Locus RAP ID RAP Annotated
Accession No		 KOME
Clone ID		 KOME
Clone Name		 KOME
Cluster ID		 MSU ID cDNA
Accession No		 RiceXPro
FeatureNum
Os04g0398300 Os04t0398300-02 001022H06 101097 001022H06 7695 LOC_Os04g32650.1 AK059136 30168


Chromosome: 4 ,  position: 19,904,288 - 19,904,716 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format 
000001 ggtaacacaa tcggtaagcg ttatgcaagg accgatgaaa tcggtgtccc cctggcaatc 
000061 acggttgaca acaccacgag tgtgactgtc cgtgaccggg acagcaagga tcagatccgc 
000121 gttgaggtcg atgaggtggc ctcagtggtg aaggaagtga cggacgggca gagcacctgg 
000181 gcagacatca tgtggaggta cccggcacat actgcctcgg ccgctgaaga ggaggaagca 
000241 tcagaaacct gaagggggca agcagtgcag tgcaagccaa aacctctggc tggaattgag 
000301 atggttgttg ccatcctgct tttctgatac atgttttaac agaatgctaa tgcagcattg 
000361 agcattgttc tgtaatctcg atgatttctc tacatattta cagatgattt tctcctgttt 
000421 actgttgat

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Barley ESTs
Acc. No. Clone Name Length
AV927246 rbasd1c10 650
more... (Total Hit Count: 3 )
Hit Wheat ESTs
Acc. No. Clone Name Length
BJ217255 rwh15m18 610
more... (Total Hit Count: 14 )
/rice/oryzabase