cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA

General information
RAP - Accession No. AK241664     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os03g0757000 ( IRGSP 1.0 )
RAP - Chromosome No. 3
RAP - Location, Length 32,180,480 -  32,183,121  ( + ) ;   2,642(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 32,180,480 -  32,180,828 ( + ) ;   349 (bp)
Exon 2 Location 32,181,023 -  32,181,058 ( + ) ;   36 (bp)
Exon 3 Location 32,182,148 -  32,183,121 ( + ) ;   974 (bp)

Related Rice IDs
RAP Locus RAP ID RAP Annotated
Accession No
KOME
Clone ID
KOME
Clone Name
MSU ID cDNA
Accession No
Os03g0757000 Os03t0757000-01 J065191P15 301025 J065191P15 LOC_Os03g55010.1 AK241664


Chromosome: 3 ,  position: 32,180,480 - 32,183,121 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format
000001 ctcttgcagc ctccacagaa agccatagta gcatcacaac ttcacaaggt agaagaagag 
000061 gagaagggag atcggcaaat atggctaagg gtcacgtcct cgtgctgccg atgccatgcc 
000121 agggccacgt catcccgttc atggagctct cccaccgcct cgccgacgag ggcttcgagg 
000181 tcaccttcgt caacacggag gtggaccacg cgctggtggt ggccgcgctg ccgccgggcg 
000241 gcgccgcgga gctccggcag cggcggatcc acctcgccgc catccccgac ggcctcgccg 
000301 gcgacgagga ccgcaaggac ctcaacaagc tcatcgacgc ctactcgcgc cacatgccgg 
000361 gacacctgga gcggctcatc ggggagatcg aggccggcgc cggcggcggg aggcccaagg 
000421 tgcggtggct cgtcggcgac gtgaacatgg ggtggtcgtt cgccgtcgcc aggaggctcg 
000481 gcatccgcgt cgtctccttc tgggcggcgt ccacggcgtg cctcgccatc atgctcaaga 
000541 tccccaagct aatcgaggat ggcgtcctca acgagaaggg taagcatgta gtttaaatta 
000601 attaatctca acttgggttt tgctttattg actgtagcgt ggttagtcgt aaaatttatt 
000661 ctttaatttc gttggttttt cacttgggtg tttgttgact agccaccgat ctttgaggcg 
000721 gctaacacaa aacgacaagc tggtacacta ggaaagtttt atctacgacc tgagttttct 
000781 ttttttttac tcagataaaa taaaagtata aatatatagg atgattttat taatctacag 
000841 ctccgctaaa atgatggcca atttattgaa tggtaaaaga aaaaaatata tcctagcaaa 
000901 taatttcata aatactccct ctgtattgta atatagcaat ctagaaccga acaagacatt 
000961 tcatggcaca acgaatctgg atatgtatct cttcagattc gttgtaatat gtgaaatgtc 
001021 tcatccgatc ttagattgtt atattatagg atggagagat tactatgata tcaatagtga 
001081 aaaaaaaact ttggctaaca attatcatgt attttgagag tacagtataa tactaatact 
001141 actgcatcat tctgtacggt ggagtctcat tcctctcctc ttgtggtgat ttgattatta 
001201 gactactgta acaccttctc ggatgtggcg agtggtgttt ggtgtcggtt tgttaaggat 
001261 agattttgaa cgatctcggc tataatccct ttgttgattt agcggcggtc ggtccgctgt 
001321 tagccttttt tcgggtacgt acattggcac agtggttata tgggtagtgt tatttttttt 
001381 tctcgctttt tctgtttaca atcttctaga gttatataaa ttttgcattg tccggtgtga 
001441 atcgctcggg aaaaaaagat atatatttct ttctttcctt tttataaatt ggtattccgt 
001501 acatatgcag atttatttgt aattctgaat tttttttcta gcacacagat caagcaactt 
001561 ctttattata agtttgacag tgtttaactg aggaaaagaa tcaacaatta ggaccaactt 
001621 gtagcgattc ctggtatctc acgagcaggc acgtgtgatc gttcgcaggg tggccggagc 
001681 ggcaggagac gctgcagctg gcgccgggga tgccgccgct gcacacgtcg ctgctgtcgt 
001741 ggaacaactc cggcgcggcg gaagggcagc acatcatctt cgacctcgtc tgccggaaca 
001801 acaagttcaa cgacgacctc gccgagatga ccgtctgcaa ctccttccac gaggccgagc 
001861 ccgccgtctt caagctcttc ccggacctcc tccccatcgg cccgctcgtc gccgaccgcg 
001921 agctccgccg tcccgtcggc cacttcttgc cggaggacgc cggctgcctg gactggctcg 
001981 acgcgcagcc cgacggctcc gtcgtgtacg tggccttcgg cagcctggcc atcttcgacg 
002041 cgaggcagtt ccaggagctc gccgtggggc tggagctcac cggccggccg ttcctctggg 
002101 ttgtccggcc ggacttcacc cctggcctga gcacggcgtg gctggacgcc ttccggcgcc 
002161 gcgtcgccgg caggggcgtg atcgtcgagt ggtgctcgca gcagcgcgtg ctggcgcacg 
002221 ccgccgtggc gtgcttcgtg tcgcactgtg ggtggaactc gacgctggaa ggggtgcgca 
002281 acggcgtgcc gttcctgtgc tggccgtact tctgcgacca gttcctcgac cggagctaca 
002341 tcaccgccgt gtggcgcacc gggctcgccg tggcggccgg cgaggaggac ggcgtcgtga 
002401 cgagggacga ggtgaggagc aaggtggagc aggtcgtcgg cgacggcgag atcagggaga 
002461 gggcgcggct gctcagggac acggcgcgcg cctgcgtcag tgagggtggc tcgtcgcaca 
002521 agaatttcag gaaatttatt gacctcctaa gtgagtgaca ctgcaaccga tcgactgaaa 
002581 tatacctaaa ttaatgtatg tacaagctga aactgaatgg gatcgactcc aaacttacct 
002641 gc

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Barley ESTs
Acc. No. Clone Name Length
AK251751 FLbaf134n18 1646
more... (Total Hit Count: 11 )
Hit Wheat ESTs
Acc. No. Clone Name Length
BJ208416 wh8d04 589
more... (Total Hit Count: 6 )
/rice/oryzabase