Update info.cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
| General information | |
|---|---|
| RAP - Accession No. | AK121484 Link to RAP-DB ( IRGSP 1.0 ) |
| RAP ID | Os03g0136400 ( IRGSP 1.0 ) |
| RAP - Chromosome No. | 3 |
| RAP - Location, Length | 2,010,603 - 2,012,526 ( - ); 1,924(bp) |
| Exon (Data source : RAP-DB) | ||
|---|---|---|
| Exon 1 | Location | 2,010,603 - 2,012,526 ( - ); 1,924 (bp) |
| Related Rice IDs | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| RAP Locus | RAP ID | RAP Annotated Accession No |
KOME Clone ID |
KOME Clone Name |
KOME Cluster ID |
MSU ID | cDNA Accession No |
RiceXPro FeatureNum |
UniProt Accession No |
UniProt Entry Name |
| Os03g0136400 | Os03t0136400-02 | J023149P03 | 216203 | J023149P03 | 16691 | LOC_Os03g04360.1 | AK121484 | 26234 | Q8H6G9 | PHT17_ORYSJ |
Chromosome: 3 , position: 2,010,603 - 2,012,526 bp |
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| Sequence (Data source : RAP-DB) | |
|---|---|
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Nucleotide
Fasta Format |
000001 agctcactcc ctcgccgcca tttacgaggc aggaaggtgt ttgtgtgaga gagagagaga 000061 gagagagcct ttgaccgccg gagcagcagc gtcaccgcca tggcgggcga tcagatgcac 000121 gtgctctccg cgctggacag cgccaagacg cagtggtacc acttcaccgc catcgtcatc 000181 gccggcatgg gcttcttcac cgacgcctac gacctcttct gcatctccct cgtcaccaag 000241 ctcatcggcc gcgtctacta caccgccgac ggcgcgtcca agccgggcag cctgccgccc 000301 aacgtctcgg cggccgtgaa cggcgtcgcc ttcgtcggca cgctcacggg gcagctcttc 000361 ttcgggtggc tcggcgacag ggtcggccgg aagagcgtct acggcatgac gctgctcttg 000421 atgatcatct gctccgtcgc gtcggggctg tcgttcgggg acacgccgac gagcgtcatg 000481 gccacgctct gcttcttccg cttctggctc ggcttcggca tcggcggcga ctacccgctc 000541 agcgccacca tcatgtcgga gtacgcgaac aagcggacgc gcggggcgtt catcgccgcc 000601 gtgttcgcga tgcaggggtt cgggatcctc gccggcggcg cggtggcgat cgggatcacc 000661 gcgatcttca ggagccggtt ccccgcgccg ccgttcgccg ccgacccggc ggcgtccacc 000721 ccgccccagg ccgactacgt gtggcggctc atcctcatgt tcggcgcgct tcccgcggcg 000781 ctcaccttct actggcggat gaggatgccg gagacggcgc ggtacaccgc catcgtcgcc 000841 aagaacgcgg agcgcgccgc ggccgacatg tccaaggtgc tccaggtgaa gatcacggcg 000901 gagcaggcgg agatggcctc gccggtggac aagcccttca ccagcaagcc cttcggcctc 000961 ttctccggcg agttcgcgcg gcgccacggg ttccacctcc tgggcacgac gtcgacgtgg 001021 ctcctcctgg acatcgccta ctactcccag aacctgttcc agaaggacat cttcagcgcc 001081 atcgggtgga tcccggaggc gaagacgatg agcgcgctgg acgagctgta ccacatcgcg 001141 cgcgcgcaga cgctgatcgc gctgtgcggg acggtgccgg gctactggtt cacggtggcg 001201 ctgatcgacg tggtcgggcg gttcaagatc caggcggcgg ggttcttcgt gatgacggcg 001261 ttcatgctgg cgctggcggt gccgtacgac cactggacgg cggcggggaa ccagatcggg 001321 ttcgtggtgc tgtacgcgct caccttcttc ttcgccaact tcgggccgaa cgcgacgacg 001381 ttcatcgtgc cggcggagat atacccggcg aggctgcgcg cgacgtgcca cgggatatcg 001441 gcggcgtcgg ggaaggtggg cgcgatcgtc gggtctttcg ggttcctgta cctggcgcag 001501 agccccgtcc cggccaaggc ggcggcgcac ggctacccgc cgggcatcgg cgtccgcaac 001561 tcgctcttcg cgctcgccgg ctgcagcttg ctcggcttcc tcctcacctt ccttgtgccg 001621 gagcccaagg gcaagtcgct cgaggagatg tcacgggaga acgaggtcgg ccagccgtga 001681 tccacccgtt aattccaccg ccgtccgtct gcatgcaaga tccatgcata tgcgtggtta 001741 gtccactaga gatttttgtt ctcttttttc tagaatccat tggaatgcat atgttctttt 001801 tttttctaga atccattaga ggctggatga tgaaataatg gccgccaatt aattgttgac 001861 gacaatgtag tttagcatta ggtgagtttt tcatataatg aaactatcat tagagttcat 001921 gctg |
Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.
| Hit Barley ESTs | ||
|---|---|---|
| Acc. No. | Clone Name | Length |
| AK248434 | FLbaf178m10 | 1916 |
| more... (Total Hit Count: 30 ) | ||
| Hit Wheat ESTs | ||
|---|---|---|
| Acc. No. | Clone Name | Length |
| CJ653320 | whgc13c07 | 710 |
| more... (Total Hit Count: 40 ) | ||
