cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA

General information
RAP - Accession No. AK107296     Link to RAP-DB ( IRGSP 1.0 / Build5 )
RAP ID Os03g0771500 ( IRGSP 1.0 / Build5 )
RAP - Chromosome No. 3
RAP - Location, Length 32,863,250 -  32,868,773  ( + ) ;   5,524(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 32,863,250 -  32,863,704 ( + ) ;   455 (bp)
Exon 2 Location 32,863,838 -  32,863,975 ( + ) ;   138 (bp)
Exon 3 Location 32,864,102 -  32,864,210 ( + ) ;   109 (bp)
Exon 4 Location 32,867,967 -  32,868,163 ( + ) ;   197 (bp)
Exon 5 Location 32,868,266 -  32,868,773 ( + ) ;   508 (bp)

Related Rice IDs
RAP Locus RAP ID KOME
Clone ID
KOME
Clone Name
KOME
Cluster ID
Tigr ID cDNA
Accession No
RiceXPro
FeatureNum
UniProt
Accession No
UniProt Entry
Name
Os03g0771500 Os03t0771500-01 110147 002126C04 16899 LOC_Os03g56110.1 AK107296 28702 Q10ED2 KNOS8_ORYSJ
Os03g0771500 Os03t0771500-01 110147 002126C04 16899 LOC_Os03g56110.2 AK107296 28702 Q10ED2 KNOS8_ORYSJ


Chromosome: 3 ,  position: 32,863,250 - 32,868,773 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format
000001 ctcttcacat tccctgcatc catccatctc aaccaccacc acctcatttc aggagatcat 
000061 ctcctccttt tctttgctag ggtttgtttg ccataactac tatctatcgc ctcttcttca 
000121 cctcacctgt cctgtcggcc atggagagct tcgccagtct cgcaggaggt ggcagcagca 
000181 gcaccacagc tcggttgccg gagctgatct cgccggagaa cccggaccac atctcgccgc 
000241 ccccgttgct gtaccagctg ctcgccggcc cggagtcgtc ggcgcggcag catgggcatg 
000301 atgggcatca ccacggcggc ggtggcggcg aagcagcagc agcagctgtg cagggacagg 
000361 tctcgccggc aggcgcggag gcggcggtca aggccgagat catgtcgcat ccacagtact 
000421 cggctctcct agccgcctac ttaggctgca aaaaggtgta gtagctaagc tagcagatgc 
000481 atatatttaa acccatgcag atacagacga caacacgcca tgtgctgacc aagctcacgg 
000541 ccgtgccgga tgtactgacc aagttgattt tgttggtttt tttatcaggt cggggcgccg 
000601 ccggatgtac tgaccaagct cacggctgtg ccggcggcgc agcagctgga cgaagccgac 
000661 ggccaccctc gtcgccggca cgagccacag cgtgatgacg acccggatca gctcgatcag 
000721 ttcatggtat caacatatat agatcatcaa ctcctttgct cgcatgcgtg catatatata 
000781 gacagacaca cacacatata tatccactgt tcttctgatc gatcgacatg ggatctgatc 
000841 ttgtcatcac aggacgcgta ctgcagcatg ctgacgaggt acagggagga gctggagcgg 
000901 ccgatcctgg aagccgcgga gttcttcagc agggtggaga cgcagctcga ttcgctcgct 
000961 ggtgagtatt ttatacgcct cttctctaca aagatttgca gcttgccata ttgggaaatg 
001021 ccgaaatggt atctcacttt atggaattgg agttagtttt ttttttgtca cctctttgga 
001081 ctcatgtggc tgttgcagca gtatttctta aggctgctaa tctcaggctt taatatgttt 
001141 attagggtgg gggataaggg ttgcatgcat tagatcagtt tcgtaataat tggagcttaa 
001201 ttaagtatac atgaccagta tgataagcat catgaggtca cacggtgagg ctgcgagctg 
001261 agctccaggg tttccaaatt gccatatatg catggctctc ctactttcca gtctccactt 
001321 cctcctgtgc aatacaacga tggtgtcctc cctctgtcgt acaatcttaa tgaatcatac 
001381 aaaggaataa ttaatactgg agcacatgca gttctttgaa cttgtacctt gtactgacgt 
001441 tatttttttt cctctgattt tcttttattt ttagaattaa gacccaacct tgctgacatt 
001501 attagcttct aattaaagag ttcagtgcat gcatcacaag tgatgaactg acaggagaaa 
001561 gctctcagca cgttctgtcc ccaatatctc tgcaggtcct tgtctaacct acatttttgc 
001621 tctcttgtca tgtcttccgc tggtagtcac agagaaatgg ctagacgatc tttgttttca 
001681 acttagacga tttatgttaa gattaagggc caagaggtaa attaaacgaa ccatcaaagt 
001741 ttgcagaaca tagtggccaa attgaggtgt aagtaacatc tagctggttg aaaacatgag 
001801 tggcggtgga tgacagaatg agtggccggt gggcctattg tcattgtgcc tccgtgagtg 
001861 taattggttt accgacctca aatcctggat cgagtcttgg ctgtcggaca tgaatgggca 
001921 ctgttagtac cctgtgcact ttgtctcatg gcctggatat atagttactg gagtggggta 
001981 aggatccagc tatatattag acaattgata agtgtgtatg accatctagt tgtgtccttt 
002041 caagtgcagt tgtttccgaa cattattgag cactttccgt agccatacga atagatttcc 
002101 agatcagaac tctttcttat atatacagac atcaatcgag tgccaaataa ttgaaagaat 
002161 gaaagcagca tagtgaccag catgcatatc atattgtgtt ttgttgaaac atagttcaat 
002221 aattttgtct atatgaacta gtgtagtttt ttacactggt aattgcatat atacaaggtg 
002281 gtgtttcata agacgactaa tatggcaaaa ttatgaaatt cactatccgt acaaatcctg 
002341 gataatatat aggagtacat atatggaaga attatctggt ttcttatata tttagtctgc 
002401 caaaatgtca ttcagctatt cccctaccga tgaggcattt ttttttgtgt ctacacatat 
002461 attcctgtct acagatggtc tcttttggaa ttgatttttg tttctaattt gttggacaga 
002521 tggtctcttt tggaattgat tttttttcta atttgttgga tatttattgg actggtgcaa 
002581 caattcatcc cctcacacat gatttgatct attccatata ctcagatgaa ttgttggaat 
002641 cctactattt caccagtatg gatcatgttc agatattagc tattgacttt tagatatgac 
002701 gtttgaaata taaattattt tttgtgactt gtttattatt aaaggtacat caaacataac 
002761 ttataatttt acatatttgc actatttttt tttgtaaggt gaatggacaa acgtcatgtt 
002821 caaaagtcag caatgtcata tatttaaaaa aggagggagg attgcattag gagttcataa 
002881 gagtgataaa cacggcttgt taataagtga atgattatct aacttaacat atatatcatc 
002941 cacaacaatg aaaatacagt ctatgcacac attactttaa ccagtgtctt gtactagcat 
003001 caatactaac tagactttgc actcttttga tgtcatttcg tctcaatgtt gtcatttcag 
003061 aaatatccat ttaactgttc ataagtaaca cttttcattc tgttaattac tttttgaatc 
003121 atattctggt tgcatgctgc tctactgtct ggaaatattc caatgtcaac agaatgtgta 
003181 tgtgcacaca tgcagcataa atagctccca gaaagtttca aataaatttt tatattggat 
003241 ggaatttgaa ctgcatacta taaatattat cctatgaatt gtaggagttg tgtaatatat 
003301 ttgttattta tatttttttt aatcttctga aatcaagggt atgaataatt tttttagtgg 
003361 aactagtgta gtctttgtaa gtatttggcc ttatttcatt gttaaaatca atagttttgt 
003421 ctatatgaat tagtgtagtt ttttacacta gtagttgcat atatacaagg tggtgtttca 
003481 aaagacgact aatatggcaa aatttatgag attcactatc cgtacaaatc ctggatctat 
003541 atattacaat cgctttgaga tgaatgcaaa ttaggatggg cacaattttt tcatagcatg 
003601 gtggaatggt ttctcttgtc accatcgttt tgaactcatc tttattatgt gcccgctaat 
003661 tactccctcc tttctaaatt gattatcatg taatagaaat caaaatttct taaattgatc 
003721 atcatataac tgcatggaga cggatttcat cggaatacaa ttaatacaac atgggagaat 
003781 gcgtgcatgc tagggtggag taattggcat ggagttttaa tcgatgtatg cattgtggga 
003841 gaatgtgtgc attgtgtctt gattgatgtg atttaaatta ttttttggtc ttggtgcgta 
003901 aatttatatg atgatcaatt tgagaaggag acagtatatt ttaaaaccgt tctgtctaag 
003961 tgttcacaca agatcactga tttttttttt tgccttcgaa taaacagaac acaagcaggc 
004021 cttgtaatat ttagtatata ttcttgtcat agcttttccc tacgaatcaa aatgaatatc 
004081 cttgtctcaa attgaacggt atggcggctg tttgactagt ctagttttct gcttggaatt 
004141 tggaaatacc gtggcctgtt tggtggagct ttagattctg ataatcagct gtttggtagc 
004201 aagcttctga aaatctggaa atgctctgaa acccagcttc tccagcttct ggcttcttag 
004261 ttcaattttc agaatctgta actacagatt ctcagaagct gtggactgtt tgggacagct 
004321 tctagcagaa gtagcttttg ggaaaagttg cagctggaag aagctcctcc aaacagggcc 
004381 tgtctagctg agcaaggaca attattgggt gcacagagtg tacaacatgt tcaggccttc 
004441 agggttgcac tgttgcttac ttcgatacac tcctacctag taaacacaaa gaattaattg 
004501 actgactggt ggcctggtgg ggctgaccga ttgagtaata cacagtacta ccattatact 
004561 ctatgcataa tctattcgat ctcccacacc tcccttcata tgaggtttac ctgctgtgac 
004621 gcacgcagtc atgtaatttt taattatttt gatagaacat catgttgaac aattaacctt 
004681 tttgagctgc tgtttttaac agagagtaat tgtgaaggca cgggatcatc agaggaagag 
004741 caagacccta gtgacaagca gctgaagcac cagcttctga ggaagtacgg tggctcgttg 
004801 ggcgatctcc ggcaggtgtt ctccaagagg accaagaaag ggaagcttcc caaggaggcc 
004861 aggcagaagc ttctgcactg gtgggagctg cactacaagt ggccctatcc ctccgtacgc 
004921 acgcatcaca tcccgtttga tcaattcaac cacattttct gcaccaaatt aactcgtttg 
004981 aaaatgcgtg aaatttacgg ggttgtgtat gagcaggaga tggagaagat gacgctggcg 
005041 cagacgacgg ggctggacca gaagcagatc aacaactggt tcatcaacca gaggaagcgg 
005101 cactggaagc cgacgccggt ggcaggcacg gccttcccga cgatggaagc tgccggaggc 
005161 ggcttccgac actccggcca cggcggcggc cttgcggcgg cggcggcgct gccgctgtac 
005221 atgggcaggc cgttcgttgt ggacggcatg taccggctcg ggtcttgaag cctctgggga 
005281 tcgcatggtg tttgcatggt gttttttgct tggtaaatat ttgctagcag cttcccatga 
005341 tcagcctgtg ggatggtgaa atggaagaac tgatgaatct tcatcacgat ctttcctctc 
005401 attttttttt ctttggtgtg tgataaaagc tcagatgtac cacgtactac tgtctgcttc 
005461 tttgcaaatg gatatgtaat tgaaagcttt aattctaaac atgggactcc tccgttttta 
005521 tatt

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Barley ESTs  
Acc. No. Clone Name Length
AK248600 FLbaf126d22 1703 view details
Hit Wheat ESTs
Acc. No. Clone Name Length
BJ305286 whyd29j07 640
more... (Total Hit Count: 5 )
/rice/oryzabase