cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
|
General information
|
|
RAP - Accession No.
|
AK106109
Link to RAP-DB
(
IRGSP 1.0
)
|
|
RAP ID
|
Os03g0339300
(
IRGSP 1.0
)
|
|
RAP - Chromosome No.
|
3
|
|
RAP - Location, Length
|
12,659,814 -
12,665,138
( + )
;
5,325(bp)
|
|
Exon (Data source : RAP-DB)
|
|
Exon 1
|
Location |
12,659,814 -
12,660,120
( + )
;
307 (bp)
|
|
Exon 2
|
Location |
12,660,579 -
12,660,770
( + )
;
192 (bp)
|
|
Exon 3
|
Location |
12,660,959 -
12,661,124
( + )
;
166 (bp)
|
|
Exon 4
|
Location |
12,664,534 -
12,665,138
( + )
;
605 (bp)
|
Chromosome: 3
, position: 12,659,814
- 12,665,138
bp
|
|
|
Now loading
|
|
Sequence (Data source : RAP-DB)
|
Nucleotide
Fasta Format
|
000001 aatgcaggta attaagcagt acagcaccaa ttaagcaaag ccacagcaac gagagagagc
000061 ttgtgaagtt gtgatatttc attttgacca tatgggttac tcctactctt ccgccgccgt
000121 ggcggtgagc gttttggtgg tggcgttggc ggcggcggcg tcgggccagc tgtcgacgac
000181 gttctacgcc tcgtcgtgcc cgaccgcgct gtcgacgatc aggagcgccg tgaacgcggc
000241 ggtggccagg gagccccgca tgggcgcctc cctgctcagg ctccacttcc acgactgctt
000301 tgtccaagca agtctcatcc attagtctta aaatcttaat tattactcct gcccctatac
000361 ttaattctct attgctttat atgatttttt tacttaattc tctattgctt tatatgattt
000421 tttttccgat tacatgatag acacatgcca ctacacacgt aacactatac ttatatatcc
000481 acgaatgtgt cctcataaca cacgcttaaa gagatatatt cttgatctca gtgaaattct
000541 attgggatat actactaaca tgaattggct aggtaggatg ttgtgattta caggccaggg
000601 tgtttggttc acgataacac tttaccacac cacatttttt tgttgtcaca gtttattaga
000661 catatacttt atactttgtt cagtgtaacc gttatggctt attcacattt ttttcaatag
000721 catgtctctt atgtcataga cttaattttc ttaccaattt catagggatg cgacgcgtcg
000781 atactgctgg ccgacaatgc caccttccgg ggggagcagg gtgcgttccc taatgtcaac
000841 tcgctgaggg gattcgaggt catctctagc attaagatgc aactcgaggc atcttgcagg
000901 cagaccgtct cctgcgccga catccttgct gtcgccgccc gcgactccgt cgtcgccgta
000961 cgtcgatccc aagcttgcta gcttgtctca aattaattga acgcaacaac tctctccgtc
001021 ctgtaaaaga caaatctcaa atgagatgtg acacattcta atactacgaa tctggatata
001081 agatagtaga tttatttttt ttagacgaag agagcagcca ttaacattgt acgacatgga
001141 tgcagctagg aggtccatcg tacccggtgg agctcgggag gagggacggg atgacgacga
001201 accaaaccat ggcgaacacc aacctccatc caccgaccac cgacctgggt aacttcgtca
001261 ctagcttcgc cgggaaaggg ctcagcccca ccgacctggt tgtactcact ggtaattaag
001321 gctcccattt ctggttaatt aattacttac tcgtttccct gagtacgatt tcctaaacta
001381 cattttgtaa gtattatata tacatatttt aataaaagaa atcaaataat tttattttta
001441 aatttataat agttaatact taattaatta attaattata cggtaataac ttgttatgtt
001501 ttgcgtgagg ctaaaaagct cagttcataa gcatattcga atgcacccta agtactaagc
001561 tgcatggggc aagctatatg tcactcaagt gttctttttt taaaatcgca cgaatgtaat
001621 cactattttt ttacagtaaa accaaccatg catatgtgaa gcttgaccgt aatgtagtgg
001681 atgagtgagc gatgaaacta ggtccaacct aacagcttca tcggtttttt aaagaaatat
001741 caaatctaag gaaaaatcag aggtacgaac catgcgattt ttaaggaaaa aaaattcaca
001801 cgagatagat atatagcgaa ttcgatctgc agtaacatat actccctccg tttcgaaatg
001861 tttgacgtca ttgacttttt agcacatgtt tgaccattcg tcttattcaa aaaaattaag
001921 taattattaa ttcttttcct atcatttgat tcattgttaa atatattttt atgtaggcat
001981 ataattttac atatttcata aaagtttttg aataagacga acaatcaaac atgtgctaaa
002041 aaatcaatgg tgtcaaacat tttaaaatga aggatgtagt atataagctc tcctactaca
002101 taagtaggcc tcttgttgcg tggattagat agctacggcc cacggttatc tgcagcggct
002161 tttttttgtg ttcagtagat ccaagctgat cgatatcaaa cagctagacc aacgtatact
002221 agctaattaa aattagaaag gacgtggatt tttatctctc gaggggatat cctctcgttg
002281 cttgtatata atctaaatag ttattaaaaa atttaaaata aaatatatca cttcacaaac
002341 aaatatgtaa ggtcaaattc gatttatacc taaggtcaat ttacgaaggg ttaatttgag
002401 ttgtttcagc tttaatatac gtgtgtagat gccacatcaa actggttaat tagctggtga
002461 aagcaacggt tttctttatc gttagttgga aaaataaatc agcagtagtg caacagcagg
002521 aggctgccac tttcttcctt ggagatggtg gtcaggtgag taccaccgcc acattgttgt
002581 cacgtgtctg tgtctattgc tctgtattcc caacctcttc tgcctagttt ccctcgtatt
002641 ccgcgcgcac gcttttcaaa ctgcaaaatg gtgagttctt ttataaaatt tctatatgaa
002701 atttgtttaa aaaatcataa tggtgagttc ttttataaaa tttctatatg aaagttgttt
002761 aaaaaatcat attgatccat tttttttaaa aaaatattaa tacttaatta atcacgtgct
002821 aataaactgc tccgtttttc gtgcactgaa aatgtgttgg gaactggaga aacgatcaca
002881 ctcttctgga tccttctcgt gcctcttagc ttttgatcaa tccaagccgt ccttccttaa
002941 tccaatggct aatataatgt tgtatatgtg gcacaatgac agagggaata aacattctac
003001 gttcatatta tgatgatgat ttctatgacg gagatcatta actaattttg cttgaaactg
003061 tccacgtaat tgtctatacg ttggaaacgt gattattttt taattagatt tgtcaaactt
003121 tcctgtgttt atggatactt gttaatgttg gttggaagta ctatatatag gtgtaaatgt
003181 tggatgttga atcaatattg attaaagtga gtccaaaaaa ggttgattta aagtatagta
003241 gaaataggtt ttcaaaaata aatcagtccc ctttcataat caagaaaaca acatatatgt
003301 cctgtagaat gtgacgcatt cgttgcatag tgtttcttat aagtcctttt cgttgatagg
003361 atttgttcac tgaatgtgac caagtaacta actcaggtac cctacactca attatcccct
003421 catatcgcta atcttctgtg cgaaactggg atatgcttaa gtcaaccacc gcctttgctc
003481 ctcatcaaat gtcggtgcat gtagtgttaa aatacgatta ttggccttat cgagttggtt
003541 cctatttatt tacaaccgta aattaaagtt ttttttaaga aatattaaac taaaattcaa
003601 ttgtgtaagc atgtttttat cggaatttga ccggttttag ataataacca ctcagttatc
003661 acagttttta ataaaaccac tggggaaatg gttttttttc tcttctctac aactattaaa
003721 aacactcctc atccctttcc cctcactcgc gtagtcgcgt gtagcgcatt aaaaaaaatc
003781 gctagataca aactgttgct acatgctaaa aaaatcacta gaattgaaaa aaacccaaaa
003841 gaaaaagaaa aagaaaaaga aaagcggttg gataaataat atcttgtttt atacttagat
003901 tcacatttta tgccctagcc tattttcaat ggtatggtca tgtttcaatg cccgaacata
003961 tcaattagta ggagtagctt ttttttaacg gatttactag aagaactttt tctagctttc
004021 gaatttccag ccataagatg ttgtgttaag attcgtgcta tactatttac atataagtta
004081 gttacagtta gttactacac cgtaactaca ttataacttc tatataatgg ggacatatcc
004141 ggtgaaaaac atcaaataag ttaaaacccg taaaaactat atctaaaagt tcgtgaattc
004201 atgaaaaaat tattagagat aggtataggc atgaaataca ttcataccaa aactcagtcc
004261 aaactcaact tcatttgaga gaaacaaaaa gacaaatttc tggtgaacag taacaggaca
004321 ctattcattc actcgaaatt tgtttttttt tctctcaaat gaagttgagt ttggacttga
004381 gattttgtat gaatgtattt catgcctata cctatctcta ataatttttt catgaattca
004441 caaactttta gatatagttt tcacgggttt tcatttattt gatggttttc accggatatt
004501 cctcctatat aatttaggta taaaagactg tatttatttt atatatacaa gttataatat
004561 tatagtgtta tagtataatt atggtgaaat tatattatat agttacattt aaaagttttt
004621 caataaaaaa gcttgcgacg attttaatga aggaacattt ctgcaaacgt ctgacacaat
004681 taagtggatc ttctggctac tactgtaact acacatgcag gagcgcacac ggtgggcgtg
004741 gcgcagtgca ccaacttccg gtcgcggctc tacggcgagt ccaacatcaa cgcgccgttc
004801 gcggcgtcgc tccgggcgag ctgcccgcag gccggcggcg acaccaacct ggcgccgctg
004861 gactccaccc ccaacgcctt cgacaacgcc ttcttcaccg acctcatcgc cggccgcggc
004921 ctcctccact ccgaccagga gctctaccgc ggcgacggct ccggcaccga cgccctcgtc
004981 cgcgtctacg ccgccaaccc cgcccgcttc aacgccgact tcgccgccgc catggtgcgc
005041 atgggcgcca tcaggccgct caccggcacg cagggcgaga tcaggctcaa ctgctccagg
005101 gtcaactgat ctgtatatct ctacgaaatg cgtcgatcta ctgtacctac gtggatagaa
005161 tcgaatcgaa taagactaga ctattaataa gctaataagt gattagcgat atcgcgatat
005221 gtataagtgc gcaacgtgat attgaattta tgtaagggct tgtccggttt attgccattt
005281 tcaacactat cgacttttaa tattattatt aaattttggt agaat
|
Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.
Update info.
