cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
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General information
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RAP - Accession No.
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AK067316
Link to RAP-DB
(
IRGSP 1.0
)
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RAP ID
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Os01g0100500
(
IRGSP 1.0
)
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RAP - Chromosome No.
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1
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RAP - Location, Length
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15,399 -
19,144
( + )
;
3,746(bp)
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Exon (Data source : RAP-DB)
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Exon 1
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Location |
15,399 -
15,976
( + )
;
578 (bp)
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Exon 2
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Location |
16,383 -
16,474
( + )
;
92 (bp)
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Exon 3
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Location |
16,558 -
17,258
( + )
;
701 (bp)
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Exon 4
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Location |
17,501 -
17,571
( + )
;
71 (bp)
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Exon 5
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Location |
17,968 -
18,057
( + )
;
90 (bp)
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Exon 6
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Location |
18,142 -
18,321
( + )
;
180 (bp)
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Exon 7
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Location |
18,531 -
18,629
( + )
;
99 (bp)
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Exon 8
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Location |
18,734 -
19,144
( + )
;
411 (bp)
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Chromosome: 1
, position: 15,399
- 19,144
bp
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Now loading
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Sequence (Data source : RAP-DB)
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Nucleotide
Fasta Format
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000001 gcagcaggcg aggagaggca accagaggga gggtaggttg gtttggaagg aaggaaggag
000061 aagagataaa caagttagga ggagacaagc atccgattcc gaactttgat ggatcccctc
000121 catatctatc ttcccatcca atccaatctc tgccctcaat tgagattcga gagctaagct
000181 aagccacgcc aaattaagcc atggcgtgca cggcggcgcg catgttcgcc tccaacgcca
000241 ccctctgcgc ctgcgagccg ggcttctacc tctccgccgc catcaacggc acctgcctcg
000301 gcctgcccga cggcggctgg caggtcggct ccgtcggcgc ctcccgcaac cagagcttct
000361 acttcctcac ccccgtcctc tccctcgacg tcgtccgccg cctcacccag tcccaggccc
000421 tcctcctcga ggccaccatc gctgccctcc tctcctggct tgccttttgt gccttcgcca
000481 ggttcaccgg acacgacccc accggcaaca agaggctctt ccgcgcgcgc ttctgggtca
000541 gccgcctcga ctgcatctac gacaccaccc actgggcggt tagttttctt tttttcccct
000601 tttttttact aataacatct tgtttcttac aaatttcttt tgccctcgcc gaacttagat
000661 tttcatcaag gccaaattaa ttgcttttga gtccttctac tcatgtcgaa attgaggatt
000721 gctttgcttc gcttgttagg aatctcctct cctaaggaac aagtttttgc tttgctacta
000781 ctttaatttc ttatccatca cactcctttt gccgctcctt cctacttcgg cacattgcac
000841 tttcttacca gtattagata ttggatatgg atattataca ttatacacta cgaacactcc
000901 ttatatccaa ggaaatttat tttctgcact aatttctact tttccaagtt gcattgaata
000961 ttgatgtacc ttgccgtact gtaggatgac cagcaagtac tgaggaaaag aaaaacagag
001021 ttgggtggta cgtgctcagt agctagcttg atactcttcg ttggattagt cactgtgtaa
001081 gtgcttaaca aagtctagtg ttggaaggaa tttgttactc actcactaac agggtgtctt
001141 ctttccttgc ttgttgcagg ctgctgtacc aagccatcca aagacgcaac attgaagtgc
001201 atcgggtcaa accagccaat gctcctgatt tgttgtcttt tgtcaatgat atcgagttcc
001261 acataaccac catctctagc atgtcttgct ctcagttggt tgccccttct acaattgcaa
001321 tgggaacacc tggatctatg gacttcaggc tgctgccttt gtcaacattg ttgacataca
001381 attgccagaa cacgagccag gggccatctg tttcactcaa gtgcaatggc tgcagaatcc
001441 cgccaagaga ccactacgta tcctggcaat ttattgacct gccaaggcaa ccagctgccg
001501 ctgttggctt ccagtttaat ctcactgcga agcaacatgg agatgacaaa catgtgagct
001561 ctgtcagtgg aactataaac tccgacaatt ttactgatga caagctgaag acattcagag
001621 ggagagattc caatgtgctc aagattcaat tgtttcctca aacatacatc aatcatcaca
001681 atttgaagct tctgcaacct ctggttcagg acttcactca aggttctacc ttttcaaatg
001741 ttagaaactt gaatgcttcc ttgcaaaacc ctatggatgg aataataaat actacactct
001801 acataagcta tctttccaac tacattgtgg agattagcaa cgaaaatgtg ctaggcccag
001861 gtgagctttt ctagtgattg ttgataccta cataagtcat ctttccagcc tattgaaaat
001921 gaagtctctt tacttgtgaa ttgtggtgtt aatgttacta agatttacgc tactaagtac
001981 caatacaaat atttgaaatc ccggtgcaaa tattttctcc atgatggctt ttttaaattt
002041 ttgggcttct actaatctga atagtttgta ttactagtat ctaatatgct tattttctgc
002101 agtcagtata cttgcaagta ttggtggcct ttatgccttc agtgtggcaa tatttctttg
002161 ccttatggct caagtaagtc atcacaaatc tatccctgtt gtttgtttaa gataaactgc
002221 cagttttttt tttcactttc gagttttaac tagcctaaca cttgttgacc tctgaatctt
002281 tgcatcttta tggggttttc tgttccactc agaattacta ataggccatg aaaattttct
002341 gatatttttt aaatgaattg aattaacata cttgcaattt ccgctcatta tcatggttca
002401 aggcgtgtgc tctggtgcac atccttcctc gacagccagc tgtcgatgta aaacttttct
002461 tgtaaccttt tcttcctatc ttaattacat tgaatgacct ccttcggtca ttccggcaaa
002521 aaagaagatg acttagtatg cagctgtaat tgatgctttg tctttccagt gtgaagctag
002581 gataaaaaag cttcgagacg aggattccag aatgctaaaa atactgagga aaagacgtgc
002641 tcaacagaat tgggataagg tgaagaatgt cctgatctaa tgatgaacat tgtacctact
002701 agactgcatc cctgatcaag catatcattt ttcttcctaa taggtgagga agtttgtcat
002761 gtatacctgg ggccctagca acttggatcc aagtgataga agtggcaaat ggcctgaaag
002821 ttcagtgatg gattctctcc atggatcctt ccacaagaaa agaaaaccga ttagacgagc
002881 aacctcgaat ggtaacaaac ctaagagaaa tcctgctgac gcggtaaagt aactgtcctt
002941 ttcaactact ctttatggca ctatttatac atttgccatt caatacagta aaatacgttt
003001 ataccagaaa aagggtaccc tgtgtacatt tttcgatact cttttttttt acttcattct
003061 ttctctgaca aggttttact tcattccttg ttgaatgatt atcttatttt tcctgtttca
003121 atgatatcac agggagttat tgacatcgaa agagttgggg aaatgcagga gtcgagtagt
003181 tctagacagg cttaatggat gaaagctgtg gatgctattg gtcattgaaa tgtgattgct
003241 cttagtctct gactcatggc tgattctaca caaatgtgct tgtaattttt atccctttca
003301 atagttccgc ataaagaatt tttttgttgc agcagcatca ttggagcggc ataccgtggc
003361 ttggctatat ggcaggtcca acacaaccgt actaccagag aggttttctt gtatgtatgt
003421 tgcaacaaat ggggagaaat gtacggagtt ttaactatta atcagcatgt tggctgctgc
003481 cgaggtcagg ccagaatcct ctttgatttt catgggactt cgtttcttga gttgtcgaac
003541 actgtatata ccttcaccag ttaccaccct ccacgtgcaa ttacagtggg gaagaaacag
003601 aaagatgcct atcatttctc tatatgaagc agatggtggc atttgtattt taatttatta
003661 catcgtgtca tcgtgtaaat cttcgtgttg gtgtgattcg ccgaccgttt tctagccggc
003721 tgattatata tgccaaactt atactc
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Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.
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