更新情報cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
| General information | |
|---|---|
| RAP - Accession No. | AK067313 Link to RAP-DB ( IRGSP 1.0 ) |
| RAP ID | Os01g0165000 ( IRGSP 1.0 ) |
| RAP - Chromosome No. | 1 |
| RAP - Location, Length | 3355383 - 3357426 ( + ) ; 2044(bp) |
| Exon (Data source : RAP-DB) | ||
|---|---|---|
| Exon 1 | Location | 3355383 - 3355828 ( + ) ; 446 (bp) |
| Exon 2 | Location | 3356445 - 3357426 ( + ) ; 982 (bp) |
| Related Rice IDs | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| RAP Locus | RAP ID | KOME Clone ID |
KOME Clone Name |
KOME Cluster ID |
MSU ID | cDNA Accession No |
RiceXpro FeatureNum |
UniProt Accession No |
UniProt Entry Name |
| Os01g0165000 | Os01t0165000-01 | 202827 | J013106O15 | 2628 | LOC_Os01g07120.1 | AK067313 | 37480 | Q0JQF7 | DRE2A_ORYSJ |
| Os01g0165000 | Os01t0165000-01 | 202827 | J013106O15 | 2628 | LOC_Os01g07120.2 | AK067313 | 37480 | Q0JQF7 | DRE2A_ORYSJ |
Chromosome: 1 , position: 3,355,383 - 3,357,426 bp |
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| Sequence (Data source : RAP-DB) | |
|---|---|
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Nucleotide
Fasta Format |
000001 gcccgtggca caactcgtgt gttgacccgc ctcgcgctcg cctgccacca ccgccaccgc 000061 cagcgagctg gatgagccag cagccgcccc cgcccgcggt tgcttcccct ccccaccacg 000121 tcaaaaccca accccaacca tgatgctcct gcgccaccac caccaccccc acagcggcgc 000181 cgccaccacc agcagcagct gcagcggcgg cggcggctgt tagagaggag ggcacacacc 000241 accaccgaca ccgacacgct cgccatgcca ccaagcgagg cggcggcgtg aggcgacgca 000301 gatctgaacg gaggaggaat aggaagaagg gaggaggagg ggagggagag gagttggaag 000361 agttggagga ggaggagatc tctttcttgt tcccgctcga tggagcgggg ggaggggagg 000421 aggggagatt gctccgtgca agtgaggtga gctgggattt tcttgacttg ttttttttat 000481 tctttttttc tctcgtgatg aatctctgag cattgctgag agcggcgctg cttgtggttg 000541 ttgtggagta gttgcggcat ggaatcgatg catgcttgtg tgcttacttt ttatcggtag 000601 taattcttgt tatgaacatg ttgaaagtag agtaaggcta tctgtttgtc cgtctaattc 000661 gtttgaagaa tgtttttgtt tccctttcgt caagtttatt attagttggg aattatagct 000721 ggatgagatt tcaggacggc gtctagtagc tttcatgtgt taaatcgggt ggaatagtga 000781 cacccttgaa attgaaattg agtgggaaat cttctgtgtt cttggcggtg cacgtgctgt 000841 tgcttgtgga atgccatcgt ggcgcaacat gaaaaagaaa agaagtattt tattcttagg 000901 gccgcttacc gttgattgct gatagcctcc ttgatttttg gacaaatgaa aaggattccg 000961 cttttggttt gttgtttttc ataatttcaa ttgcatgctg tttcgatttg tgtcttgcaa 001021 tgttcagctt tgtggaatta ttgagttacc tcattgggtc aggaagaaga gaacgcgaag 001081 gaaaagcgat ggccctgatt caatcgctga aaccatcaag tggtggaagg agcaaaacca 001141 gaagctccag gaggagaata gctccaggaa agcgccagcc aaggggtcca agaaagggtg 001201 catggctggg aaaggaggtc cggaaaattc aaattgtgct taccgcggtg tcaggcaacg 001261 gacatggggt aagtgggtgg ctgagatccg tgaaccaaac cgtggaaggc gcctatggct 001321 aggatcattt cctactgcgc tggaggctgc gcatgcatac gatgaggcgg caagggcaat 001381 gtatggtccc acagcacgtg tcaattttgc agataattcc acagatgcca actctggctg 001441 cacatcagca ccttcattga tgatgtctaa tgggccggcc actatacctt ctgatgagaa 001501 ggatgagctg gaatctcctc ctttcatcgt ggctaatggg ccagctgtgt tgtatcagcc 001561 tgataagaag gatgtgttgg aacgtgtagt ccctgaggtg caggatgtta aaacagaagg 001621 gagcaatggc ttgaaacgtg tttgtcagga gcggaagaat atggaggtat gtgaatcaga 001681 agggatcgtt ttacacaaag aagtgaacat aagttatgat tatttcaatg tccatgaagt 001741 tgttgagatg ataattgttg aattaagtgc tgatcagaaa acggaagtac atgaagagta 001801 ccaagaggga gatgatgggt ttagcctttt ctcctattag agtagtagtc atgctgcggg 001861 tcaataggaa tatttcattc tagctgctag gggatacttc aaatatctgc aacctgaagc 001921 tttgtagtca tttacggttt tcgtcttact gggtaatagc tttatatata ctataagcca 001981 actggtacaa gaagttgtac tgtgtgttga gtgcactgtg gtaaaaatga atctatattt 002041 aatg |
相同な Wheat 及び Barley の EST データはBLAST 結果の E-value が e-20 以下のものです。
| Hit Wheat ESTs | |||
|---|---|---|---|
| Acc. No. | Clone Name | Length | |
| BJ291030 | whsl21f08 | 620 | view details |
