cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA

General information
RAP - Accession No. AK067313     Link to RAP-DB ( IRGSP 1.0 / Build5 )
RAP ID Os01g0165000 ( IRGSP 1.0 / Build5 )
RAP - Chromosome No. 1
RAP - Location, Length 3,355,383 -  3,357,426  ( + ) ;   2,044(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 3,355,383 -  3,355,828 ( + ) ;   446 (bp)
Exon 2 Location 3,356,445 -  3,357,426 ( + ) ;   982 (bp)

Related Rice IDs
RAP Locus RAP ID KOME
Clone ID
KOME
Clone Name
KOME
Cluster ID
Tigr ID cDNA
Accession No
RiceXPro
FeatureNum
UniProt
Accession No
UniProt Entry
Name
Os01g0165000 Os01t0165000-01 202827 J013106O15 2628 LOC_Os01g07120.1 AK067313 37480 Q0JQF7 DRE2A_ORYSJ
Os01g0165000 Os01t0165000-01 202827 J013106O15 2628 LOC_Os01g07120.2 AK067313 37480 Q0JQF7 DRE2A_ORYSJ


Chromosome: 1 ,  position: 3,355,383 - 3,357,426 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format
000001 gcccgtggca caactcgtgt gttgacccgc ctcgcgctcg cctgccacca ccgccaccgc 
000061 cagcgagctg gatgagccag cagccgcccc cgcccgcggt tgcttcccct ccccaccacg 
000121 tcaaaaccca accccaacca tgatgctcct gcgccaccac caccaccccc acagcggcgc 
000181 cgccaccacc agcagcagct gcagcggcgg cggcggctgt tagagaggag ggcacacacc 
000241 accaccgaca ccgacacgct cgccatgcca ccaagcgagg cggcggcgtg aggcgacgca 
000301 gatctgaacg gaggaggaat aggaagaagg gaggaggagg ggagggagag gagttggaag 
000361 agttggagga ggaggagatc tctttcttgt tcccgctcga tggagcgggg ggaggggagg 
000421 aggggagatt gctccgtgca agtgaggtga gctgggattt tcttgacttg ttttttttat 
000481 tctttttttc tctcgtgatg aatctctgag cattgctgag agcggcgctg cttgtggttg 
000541 ttgtggagta gttgcggcat ggaatcgatg catgcttgtg tgcttacttt ttatcggtag 
000601 taattcttgt tatgaacatg ttgaaagtag agtaaggcta tctgtttgtc cgtctaattc 
000661 gtttgaagaa tgtttttgtt tccctttcgt caagtttatt attagttggg aattatagct 
000721 ggatgagatt tcaggacggc gtctagtagc tttcatgtgt taaatcgggt ggaatagtga 
000781 cacccttgaa attgaaattg agtgggaaat cttctgtgtt cttggcggtg cacgtgctgt 
000841 tgcttgtgga atgccatcgt ggcgcaacat gaaaaagaaa agaagtattt tattcttagg 
000901 gccgcttacc gttgattgct gatagcctcc ttgatttttg gacaaatgaa aaggattccg 
000961 cttttggttt gttgtttttc ataatttcaa ttgcatgctg tttcgatttg tgtcttgcaa 
001021 tgttcagctt tgtggaatta ttgagttacc tcattgggtc aggaagaaga gaacgcgaag 
001081 gaaaagcgat ggccctgatt caatcgctga aaccatcaag tggtggaagg agcaaaacca 
001141 gaagctccag gaggagaata gctccaggaa agcgccagcc aaggggtcca agaaagggtg 
001201 catggctggg aaaggaggtc cggaaaattc aaattgtgct taccgcggtg tcaggcaacg 
001261 gacatggggt aagtgggtgg ctgagatccg tgaaccaaac cgtggaaggc gcctatggct 
001321 aggatcattt cctactgcgc tggaggctgc gcatgcatac gatgaggcgg caagggcaat 
001381 gtatggtccc acagcacgtg tcaattttgc agataattcc acagatgcca actctggctg 
001441 cacatcagca ccttcattga tgatgtctaa tgggccggcc actatacctt ctgatgagaa 
001501 ggatgagctg gaatctcctc ctttcatcgt ggctaatggg ccagctgtgt tgtatcagcc 
001561 tgataagaag gatgtgttgg aacgtgtagt ccctgaggtg caggatgtta aaacagaagg 
001621 gagcaatggc ttgaaacgtg tttgtcagga gcggaagaat atggaggtat gtgaatcaga 
001681 agggatcgtt ttacacaaag aagtgaacat aagttatgat tatttcaatg tccatgaagt 
001741 tgttgagatg ataattgttg aattaagtgc tgatcagaaa acggaagtac atgaagagta 
001801 ccaagaggga gatgatgggt ttagcctttt ctcctattag agtagtagtc atgctgcggg 
001861 tcaataggaa tatttcattc tagctgctag gggatacttc aaatatctgc aacctgaagc 
001921 tttgtagtca tttacggttt tcgtcttact gggtaatagc tttatatata ctataagcca 
001981 actggtacaa gaagttgtac tgtgtgttga gtgcactgtg gtaaaaatga atctatattt 
002041 aatg

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Wheat ESTs  
Acc. No. Clone Name Length
BJ291030 whsl21f08 620 view details
/rice/oryzabase