cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
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General information
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RAP - Accession No.
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AK104414
Link to RAP-DB
(
IRGSP 1.0
)
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RAP ID
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Os03g0122300
(
IRGSP 1.0
)
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RAP - Chromosome No.
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3
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RAP - Location, Length
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1,234,474 -
1,243,930
( - );
9,457(bp)
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Exon (Data source : RAP-DB)
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Exon 1
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Location |
1,234,474 -
1,234,945
( - );
472 (bp)
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Exon 2
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Location |
1,235,971 -
1,236,295
( - );
325 (bp)
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Exon 3
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Location |
1,243,344 -
1,243,591
( - );
248 (bp)
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Exon 4
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Location |
1,243,708 -
1,243,930
( - );
223 (bp)
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Chromosome: 3
, position: 1,234,474
- 1,243,930
bp
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Now loading
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Sequence (Data source : RAP-DB)
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Nucleotide
Fasta Format
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000001 gtgccaagtt gtgtgtgtgt accgcggcat ggcggaccag ctcatctcca cggcagacca
000061 cgacacgctg ccgggcaact acgtgcgccc cgaggcgcag cgcccgcgcc tcgccgacgt
000121 gctctccgac gcctccatcc ccgtcgtcga cctcgccaac cccgaccgcg ccaagctcgt
000181 ctcccaggtc ggcgccgcct gccgctccca cggcttcttc caggtataat aaatcactag
000241 cactactacc tacgttacta catcgtccat ctcgtataag caggtctcac acatgttgga
000301 tgttgctgtt gcatgcaatc gatcgatgga gttgatcagg tgctcaacca tggggtgcca
000361 gtggagctga cactgtcggt gctggcggtg gcgcacgact tcttccggct gccggcggag
000421 gagaaggcca agctctactc cgacgacccg gccaagaaga tccgcctctc caccagcttc
000481 aacgtccgca aggagaccgt gcacaactgg cgcgactacc tccgcctcca ctgctacccg
000541 cttcaccgct acctccctga ttggccatcc aacccccctt ccttcaggtt actccacttt
000601 tcctgccttc tctactactc ctattccaag tactccaaag accatttctt gctcatctca
000661 aaagactctg caagtcagtc atcactgctc catcttcgct ttggtattga aagaaacaac
000721 aggacagacg aatagctagc ttggacggct ggtgaaatta ctccatgcag gccgtgtcta
000781 gttctttaca caattttttt taagtataca aaacaaatta caaattccgc ctgtaaactg
000841 ttagataaat ttattaagcc taattaatct gtcattaata aatatttaat gtagcatcac
000901 atcgtcaaat cataacgcaa ttaggctcaa aagattcatc tcgtaattta catgcaaact
000961 gtgcaattgt ttttttcgtc cacatttaat gctctataca tgtgtccaga catttgatgt
001021 gatatttttg gcaaaagaaa aattagagat ctaaacacgc ccacaattac aagtggttac
001081 ctttcccatt cacaactcac aactcatgca cacagatgtt aattccaagt ccccacatgt
001141 ttcagcgttg cttttttttt ccttagggaa acggagtttc ttaaaataaa atgtttaatc
001201 cttggaaacc aaagtaaaac gttgccattt tcaagtttgg tccatacccc acggacagaa
001261 aagaactata gtacttgacc aatctttttc gctccttgcg tgatactgaa cgatgtgttt
001321 cgaggtggtt tgaaaatgcc aggctaacca ctctgaacag ttcttgggga aaaaaaacca
001381 ctctgaacct gaacgactct agctgtgggc tgtggctacc atgtgccaga gagacagggc
001441 tccattctaa acaaattccg ggacaaacag accttttgct ttcatgaaag ataacaaaga
001501 gttatcacag attcattgta ccctcctctt caatgtttag ttttttttga tggaggaagt
001561 actcctatcc aatactccaa caaaccacgg ctccacgttt atcatgtttc attactcatt
001621 agcttgcagt agaatgaaca aaatattgtc tccgttttct tttacttatt gttagacatc
001681 gataatcttt aatgtacata ttttatcact accttttcta attttatttt cataaaaact
001741 attaaaaata agtaccatga cggtgatcct tactaattag tattctaata ttggcattat
001801 caccataggc tgtgtttgtt tgggggttgg gaacctttct cctggcacgt aaaatggagg
001861 aacggattag cacataatta ataaagcatt agctaaaaac ttgataagtg gattaatatg
001921 atttttaaaa gaacttttct atattagatt tttttaaaaa aacgtatggt ttagcagttt
001981 agaaagcttg cacatgaaaa atgagggaat ggaagttgaa aaggtgtatt atagaacaca
002041 gccttagaat tgattttaac cattgattta tgagttctat tatgagtaga aacaattatt
002101 atactactgt cacgccccga actagtcccg accggaacta gcccgtgacg ctccaaatta
002161 acctgttaat cgataccagt cccaggaaac agtgctggta tcacaggaag acagaatatc
002221 acagcaacaa aggtctcttt attatagagt agaggtacag tcatgttggg ctgcggacag
002281 atcccaagct cacaactgca ttgcaaaaag ggaaacggaa gccaagactt ggaccaaaca
002341 acacaggcgc gacttgggaa ttaggccgaa accctaaaac tcatcgtagc cggtttgctc
002401 ctggaagaac tcctcgtcag cgggatccgc ttcatcttct tcagcaactg ggggggatta
002461 tttatataga gcaagggtga gtacgggagt actcagcaag ccatgggaaa taagtgttta
002521 atgcaggctt caaggaaagg ctgttgtttt tgcaattgat tttatttgaa ctcttttctg
002581 aaaacaacta agtgagtgct tctcaaacga cacggatgag acagtgcgtc tcgtccggtc
002641 ggagtatgtg caatgtatca gtctttagaa ttgttcaaga ttggcacctg gccatcaact
002701 ttcaaacggc cacccgggcc aacaactttc aaacggccac ccgggcctag ctgatcccat
002761 cagctgcaga ttttccaaac atcgattccc cttttcacaa cagcaatttc acaaggcagt
002821 agtcaaacaa aactacgcta ggaatcacct cacatccgcc catgaccatg ggcacggctg
002881 ttcgaacagt ttgttaacct ctgcagaggg ggtacacttt acccacacga cattactaac
002941 ccggatcacc caacccgtgg ggatcagcca cgtcgggaga tctccaagct ttcatgacaa
003001 ggcatttcca aagccgacac aggtttacca tatgccgacg agaggggtcc cagaccaaca
003061 acaggttagg tcccagacca tactgtgcca ggaagcccag gggtcctccc cgacaccacc
003121 ccggcgaatc cacatgtctc tcggcatcaa ggctcccctg ataaactagt tactcagcca
003181 ggggtgtccc attccaccca tgtggtcgta cttgtcttat gttcggatga aattccaagg
003241 aaacggtcct taagtgcaag agcgggaaac cgtacacccg gtacgttccc cggtccgtgg
003301 ttttggaaat tcatttagtt cgcaagcacc gacccaggtg tcgggttttc caagtctttt
003361 gtaaaaccca agttttaccc aagaagttac tcagatttta agtttgaagg cgaccgtcga
003421 tactcgcata gagtgcacga atatcgaggc gcaactagat ggttacaagg gaacatggta
003481 taacaattaa caaaggaagg atcagatgca acaaattagg taggttcgcc aatctgcctt
003541 gcagacggga caagcaaatt aagtgcgatc ctatcaatgc ataatatttt tttcaagcaa
003601 cataattaag ttcagatata ggctcaagat gttcaaaggt ggcttgcctt gctcgagatc
003661 ttgagcttga tcctcgaaat cctcgcactg cgggtcttcg ggctccgaaa ctacacgcaa
003721 aacgggacaa ctcaacaaac ggcgaaaata aagccctatt aatgacctct aagcgtgcca
003781 ttagatagat ctcgagattt gaggaatttt ggaagttgaa cggagtcaaa cggatttacg
003841 gttgggaaga tattgaattt ctaagattat tggatttttg gtctaaagga aaaaggattt
003901 atttaaatcc tttttgaaaa agaaaaggaa gagggagggg aagtagactt ccctcgggcg
003961 gctagggcgc ggcccgagag aaaaggggcg gctcggccga gctaaatggg ccggccggcc
004021 caagaaggcg gcccaaagcg cgcgcgcggg cggggagggg agagagagcc ggtgggccgg
004081 gtccatcccg cgtggtcccg ggtgggaccc gcttgtcggt gacacggttc accgtgcgga
004141 acgcgcacgc ggcgcgcgct agggtttggg ggagggacgc ggtgcacgcg cgcggttcgc
004201 ggaagatgcg gtgcggcggg cccacgcgca gcctcacggc tcaccgcgga ccatgcgcac
004261 ggggggggaa cggagggagc ggctggccgg gtcagccgat ccggtcgcgg ccgaggtggc
004321 gccgacatgg cgcctaagtg gcagccacgc gggccggcgg gaggtagacg acgacgccgg
004381 ccggaacgga cggcggacga cagcggcggg cggcggagcg aaccacggcg atacaggcga
004441 aagcgagcac accgggtggt tgcacgagac gaggggagac gagccaacgg cttggattcg
004501 ccggagggag tgcgtcggcg gcggattgcg gcggcggcaa ccggcgggga gggaagaggg
004561 aaacggcgac gaggtcacga ggggccgatt cccggcggcg agagcatcta cgcggctacg
004621 ggaatccgtc ccttgcgccg gattaggagg aacgcatcga gggaggccgg cgacgagagg
004681 cgcttccgag ctcgggcggc gacggcggcg agcacacggc gagcgacggc agcagtcggg
004741 gcggcgccag ctagctacgg ggaggctact cgtgctacta cccgagtcta agggaagggg
004801 atggaacgag gagggagaat agggagatgc gctaccgtgc gggacggggc gcagtgacga
004861 tgggccgacg gcacgggagt gatctctccg gcctcgggcc ggggaagagg aagaagaggg
004921 cgcgcccgga gtccccttcc gcgtcctcgc tcgtgccggc tcctccgaca cgcgcgacga
004981 caaacggcga cggcgaacag agcacgggag gcggcgacaa tggagtggag gcgatgggac
005041 aacgagagga gaagagaggg agggcgcctg ggctttatag gatggcaatg acggtttggg
005101 agaggggaac cgactttgga cggtcaagcc agcgagctgg cgctccggct agcggccaaa
005161 tcggcgacag ggcggaggga ggatgacgcc ggcgggagga aaaaagggaa aaggagggag
005221 agaaaggggg cttgcccctt gcctctttgg gaaaaggagg agggagcggg ggcgacgcgg
005281 cagagggagg aggggctctg cctccgtccc ttggaagcta gcgcgcggag tggcggggtc
005341 gggttgatga cgacggcgat gacggcgggg cggtttggag cggagcggcg acacggacgg
005401 caggcgcgga caggcgcggc agaggctgac ggcagcggcg accaggcggt cggccaccac
005461 ggcacgcgcg cgcgggaagc aacgggcggc gcggcgattt gagcggcgcg gctcgggcac
005521 gcgtgctgac tcgcggcgca gacggcgcag gcgcggcacg ggcggcgacc gcacgggcgc
005581 gtgcatgcga acaacggcgc gcgggaagca gcagcgaggg agcggagagg gagggctcgg
005641 ctcggcgcgg ctcatgcgca cgcgcgcgcg gcgcgcgggc agagcggaga agagggaggg
005701 agagagagag agcgagagag agagatagcc ggggagggag gggaagatgg gccgagagag
005761 attcggccca tcgaacccga gggaggaaaa ataaactttt gcggagggat cgatttggga
005821 aggtttggat tcgggattga actcgacgat agatcgggga tttgagatct gagatggcac
005881 ggacactagg caacaagcaa agaaacagat ttcgcaaata gagtttttaa gagatagttt
005941 tcccgctagg cgccacgacg gaacgggcgc tacaactact agtagttggt tggtagtaga
006001 aatagatatg atctattgga ttagaataag atatacgatt tagattggtt ctactatcgg
006061 taaaaaggat taaaaatata attatataaa agagatttcc atgccaaatc taccaacacc
006121 attttctcat gttaaatttt agtatttttg catgaattaa tcatttaaga ttcaaggttt
006181 gactgcacgc attctataat gctatttatt tgagttagtg caataattga agtagcgggc
006241 ttcaaaaatt gccacatcaa atttgtgatt aggtggagag atgatagaag atgagaataa
006301 tagcggtgtt atagatttgt agccagctat agcatgagtt ataagacatc gtgtgtagta
006361 aatatttatg tgtaactatt atatagatag actattagat tagctgtaga tgatgtgcca
006421 atttttgaag ctaataatag atggctatac tattatactt gctatttgag atcggaggta
006481 gtaaacaact actttctcag ttttaaatta tgagcatctc taggtttctt agtggagatt
006541 aaagttgaga agaagagact ctggcattaa aaatataatt atatgaaagt gattttcatg
006601 gcaaataaga tttatgggta ggttaagcag agatgagaag agaggagata gagaagaaaa
006661 gtgtgttaca tatgtgtagc taacagtagc acgggctata agacggtgtg tgtagtatat
006721 atttgtgtgt aagtattgta tggatagagt attagattag ctgtagatga tgtgccactt
006781 tttgaaacta ataattggct atattattac acttgttgtt tgatattgga gacagtagac
006841 aattgttctc tccattttaa aatataagga tttctagatt gtatagcaaa gattaaagtt
006901 gaggaggaaa cactttggtg ccccttgtgt aacaagaaac aacttgaggc aggaggtagt
006961 tagagcctct tagaggtaag atgagattta aaataaatta ttgatgggat aagtagtatt
007021 acaaatcatt tttatatatt gtaacaacat gaactagtga ggttgacctg tcatgctagc
007081 aatgcctttt atgtctctgc actcatatac tgtaagaggc aattttagca cagacatcga
007141 tcgaggaaac agaaagaagg ttggagctac tagtaagaca atgcaatgag aaccacattt
007201 ttcccctact gaaaaagtcg catcgcatca gtcatgtaca caatcacatg aagatcccaa
007261 catcagaaac gatgaagtgg tcacgtgcat ccatgcctag tgctgggatc atttcacctg
007321 ctaagaatcc actagtgtcg gtttcgtagg acctcccttc tcatcagtgc ttggatgggg
007381 atttcaatgg gagctcattg gagctcgttg gtgtgatggt ggatgacttt atttcaaatc
007441 ctgatataca taaatatggt tgtgcacttg tgcgcattct tcgctcaggc cgaaagttat
007501 cctttgttta tccaaaaaca aggtcgaact taggaccagt aggacaaaag atcaagggaa
007561 ttaatcacgc attatctcct aagttaatcc ttatattatt aaccataaga tgaatttact
007621 ttgacgatgg tgcagggaga tcataagcac atactgcaaa gaagttcggg agctcggatt
007681 cagactgtac ggagcgatat ccgagagcct gggcttggaa caggactaca tcaagaaggt
007741 tcttggtgag caggagcagc atatggcggt gaacttctac cccaagtgcc cggagccaga
007801 gctgacgttc ggactgccgg cgcacaccga cccgaacgcc ctcaccatcc tcctcatgga
007861 ccagcaggtg gccggcctgc aagttctcaa ggaaggcagg tggatcgccg tgaatccaca
007921 gcccaacgcg ctggtgatca acattggtga tcagctacag gtgatgcata tatcagtttc
007981 ttttatcaga gtatataatg gactaggtta ggtgttcaga taacattgct gaaaatctta
008041 gtgcttgttt agttctcaac tttttcttca aacttccaac ttttccatca catcaaaact
008101 ttcatacaca cataaacttt taactttttt tcttcaaact tccaatttta gtcaaatttc
008161 taattttagc gtggaactaa acacagcctt aaccatggca attgaagctg ttgtgtgttc
008221 aggtatagct tgttggtaaa cgatcaggct aggtggcaga caatgctagt gcggcagaat
008281 atagttgggt cacctaggac aaacacttct tgttgcagaa aaaaaaaaga cgagctgttg
008341 accaacatta taataactgt gataatagaa aaagaccaat aaggacccct ttttgatttg
008401 caggacagga aaaacacaag aatagaaaaa ccgcaagaat tagggtagta acacttctca
008461 aatcttacat gaatataaaa aacacaggaa aaacaatatg agtcttttga tagtgttatg
008521 ggaaaaacaa aagaaaatta cttcattgct atttttccta agaaatatga aacaagtaat
008581 acaatcttat agaaagtttc ctttcttttc tataatcaaa gggacatgta ggaaaaaatt
008641 cataggaatt taaattatat gaaaatactt ggccagattc tatcattttt atgaatcgaa
008701 gaggccctaa acagccagat ataatggatt gagtatagta ctaaaagata tcgataccgt
008761 gatacgtcgc acacagagat ttttctctag gagtagataa atgaagattc ttctatcgga
008821 tgccaattgc catggtttat actttgcaaa gagtagttaa atatttgcag gaaatctgaa
008881 ctgcaaagca ctgaactgta ttttttttat tcagtaaata ttttccaagt gttggttctg
008941 ctctgcagca gaatttgtaa cctctgtaac ttccatatat tgcaggcgct aagcaacgga
009001 agatacaaga gcgtgtggca ccgtgctgtc gtcaactctg acaaagcgag gatgtccgtc
009061 gcatcgttcc tgtgcccctg caacgacgtg ctcatcggcc cagctcagaa gctcatcacc
009121 gatggctccc cggccgtcta ccggaactac acctacgacg agtactacaa gaagttctgg
009181 agcagaaacc tcgaccaaga acactgcttg gagctcttca gaacaacacc tacagacaca
009241 tcttgaattc ttgatctagt cgagaactgg tttgtagtac tcggttgtag gtgtaggtgg
009301 tgtttgggag agggggtggt gtttgggaga gagcccgact tattgttttg tgagaggatc
009361 tcccaaacac ccccgtagtt tctcggttga agttgtttgt agtactcggt tgtaggtgta
009421 ctggaacgag ccgttggaat gagtaatcaa tcaaatc
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Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.