cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
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General information
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RAP - Accession No.
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AK103809
Link to RAP-DB
(
IRGSP 1.0
)
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RAP ID
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Os03g0681400
(
IRGSP 1.0
)
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RAP - Chromosome No.
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3
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RAP - Location, Length
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27,922,471 -
27,927,412
( - );
4,942(bp)
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Exon (Data source : RAP-DB)
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Exon 1
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Location |
27,922,471 -
27,922,800
( - );
330 (bp)
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Exon 2
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Location |
27,922,886 -
27,922,974
( - );
89 (bp)
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Exon 3
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Location |
27,926,472 -
27,926,535
( - );
64 (bp)
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Exon 4
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Location |
27,926,648 -
27,926,750
( - );
103 (bp)
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Exon 5
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Location |
27,927,056 -
27,927,159
( - );
104 (bp)
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Exon 6
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Location |
27,927,310 -
27,927,412
( - );
103 (bp)
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Chromosome: 3
, position: 27,922,471
- 27,927,412
bp
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Now loading
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Sequence (Data source : RAP-DB)
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Nucleotide
Fasta Format
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000001 gcacaccttt ccccccctct ctccctccct cctccgccat ccctagcagc cgccccgcac
000061 ccgcgcccgc accatgacga gctcctcctc cccttcccgc aaggtaccaa accctaaccc
000121 taaccccctc ctctctaccc tcatcccctc cggatcccat ctcccctccg ccccgattcg
000181 ccgtaatttg ttttgggggt ttttttctct ctctctctga gctgtttgtg tgtgtgtatg
000241 tgtgttcgtg caggtgctga gcaagatcgc gtgcaaccgg ctgcagaagg agctcgcgga
000301 gtggcaggtc aaccctccct ccggcttcaa gcacaaggtc accgacaatc tccagaggtg
000361 accccccccc tcccccgcga ccactccaaa cccacgcggt ttttgtcctt gccgctttcg
000421 cgtttcgtct ctttcccttt cgattcagat gaaatcgcaa acccttttcg gcgtcctgat
000481 tgacccagga tctccttttt ttctatgagg gttttggccg cgtagtcgtg aaatattcag
000541 tcgttcatgt tcttgtatga tttatttatt ttcaactttg atactttctt gtgatttttt
000601 atccatgtga aaagcatgaa aaataatata tcatgatatg gattattccg aaataaaaaa
000661 aggtgggtca tcgaggtcgc gggggctgcg ggcacgctct atgccggaga gacataccaa
000721 ttgcaggtgg acttccctga gcattacccc atggaggctc cccaggtggg atttcttgcc
000781 ttctctttat actatttatt tatactgtgt ttagtttggg tatactgcat gcactggaat
000841 ccaacgcttt gggtttgatc gacttgtttt tctgtaggtc atatttcttc atccagcgcc
000901 aatgcatccg cacatttaca gcaatgggca tatctgttta ggtaaaatga ttgtatgctc
000961 ctattgatgc ataaataatt gttgttttcg ttcttgatgc ttttgcccac tccattaatt
001021 ctcttgggtg tacagcattt ttactggacc tgttttacag ttttagcatg tccacgaaat
001081 atgcctttct gtcttgctaa tgaaagctgc catcttcaat ggcaagcata atacttagga
001141 gtttaaagta gtaaataact agggtagtaa ctgtatgata agttttaaac acatttagct
001201 atcccagctg taccttttaa ctttatatat gctgggaagt gtacaaactt agaaagtaac
001261 acttgaagtc cttagatatg ggtgtatggg catagaggaa gtgactagaa tataggtgga
001321 ttaaccttat ccacttctat ttgtctaggg taatcctgtg ttagataatg ttgaccaaga
001381 tcaacacttg tctcttccac caccacatgt tgtttttagc acctttgcat atcctcttgt
001441 cgttcatgat caagaactcc caactttttg acacatctgg gcaattctgc tattatgttc
001501 ctgattgaca tttaacaatt tgactattgg ctgtgctgtg atgtctggtc tgttcatgga
001561 ggttctggat gtagttaagc tgaaattcta gcctatgtgg ttatctagtt aaatttatcc
001621 ttaagaggct gcacccctta tttagtggaa gttctcttgt aagttacaac acacaagtta
001681 attgatgtgt actatgtact ttatgtaatt ccttgatgca ttgaaatgga tggttacaaa
001741 ctttccggtg gattggtaaa atagtttatg atagagcggt gttgagatga accattcaat
001801 aaattctccc aacgtagcaa acctgtacaa taagatgtct tgtactcaac aatttttaca
001861 agatgttatg aaacacataa tacatgcctg ccagatacct caagttatta gatgttattg
001921 ttgtgcatat attctaatgg tgggatattc caaaattttc ttgtattaat gggacaatac
001981 tgtacattgt catcggatat tgtcctgcct gctgtgaaat gttcaatcca gtgtagattg
002041 ctaagtgtac agaatctaac tagtttgtca tccttttcaa gaaaaatggt tgcccatgat
002101 ataagcattc ccactatcag cttacattaa tattggcaag cacaagtcct ctgcagtatt
002161 acttctctag ttaaagcaat gcctttttgc agatgtatat gcagcagatg caccctagaa
002221 aattttcaaa tcttgagcat cctgaccatg gttcaagaag gcgctagttg ggtgactggg
002281 gggcgcctcg gtcaggccag atagtcaaat ccaagaaatt agcaagcata ttgcataaaa
002341 cttggacttc ataacactaa aatagcaaca gaacaccacc cacgttagtt cagccgccta
002401 atgcaccatc taatacttaa tcgtggcggc tacctagtgc atagagccaa cttttagaaa
002461 actgatcttg actcccaagt tgctcatatt taacggctta cccatagtat aaaaatccac
002521 cagacggcaa gccggcacaa ctcgtggttc acagcaaccc ccactgccac cccccctccc
002581 ccccagcaca cacacacaca cactgcctgg tcccactgtt ggactgctga accatggctc
002641 actaaaatcg ataccgatgt atattctcca tgtaacacaa gtgatttgct acctggatgg
002701 ttgaagggca gcagctgcag gttgctcacc agtgttctat cctctgcctc cttttttttc
002761 tcataactgg gcctaacttg ccattcactg atgagccgtg cggtttatga tccgtttcca
002821 ttggttcacc agttcttaga aaaaccatct ggttttcctg gtttactctc ctgtccaata
002881 gcagaagcga tccttcacac aaaccaaacc ggaagggatg ctggttaagt atgatggtgc
002941 accttcctct tttttaactg aattattgtc ttttcaactt tgcaaacatt cagttccttt
003001 cctaatgcag tgatgccact ttttggaatg attgttttgc tactttattt gtctatcact
003061 ccacctgtct agttcagtac aaaatgaaat ttggtgaatt gagttgtgca tttgcattcc
003121 cctttacttt ctaacattaa tataaccatg ttttgacttt taatgcaata catgaccaga
003181 ggaatgcctc cttttatgca aagagcatgt gttttgtagg tgaaaggtat ctattacacc
003241 atacaaatga atctagcatg gctcaatgca tttaattccc ttactatgtg tgctggataa
003301 ccttttttcc cggtttgatg gtgtggcttg tttgtttttt cctgtcaact agcgacatac
003361 ccatgctttg ctattggcag aagaaacaaa atattattgt atgtcatagt aaaacatatt
003421 ttatcaaata tcttagcatc acttgtttgc ttattttatt atctgatact agaaaaaatg
003481 cccgtgcgtt gcaatcggtg aaggctattt taattttatt attgttatac ggtttagcta
003541 aggtgaaatt cactacggga atttgcttgg atatatgtta gaaaatcatg agctgcaatt
003601 aggagtacga ctcatgtctc aagttagtat gcgaattttt tttaaagaga tttcttatat
003661 gactcctgta tttccaaaag cgaataaact taaaaaaacc aactcaaaca cagatctgta
003721 tttccaaaag caaacaaact taaaaaccga ctcaaacacg gatgacgtac gaaagtaccg
003781 gcaaaaacat cttcaatttt tataatagtg gagatttact tgattggacc aaatattgga
003841 ctattccata atattagaaa atatcatgga acaatttgta aaaactgcta aagcaatagc
003901 ggggtggcag attcattgcc accaccactt gaggctttta aataagttta tatattggtt
003961 aattgccacg ttaatttcta ggttattttt tagggcaaag cagggctaaa tttattactt
004021 ggagaatatg atggatatgc ttccgagctt tttgctggcc tatgttatca agaattcaag
004081 agatgtcttt ctaaaataaa ggaccgaaac ctgcgatttg gtgacacaaa ataccttgca
004141 tgcctttttt tttttttgta attctggacc ctaaaaatgc taaattttgc ccccttttta
004201 ttttttttct ttgtacacat tgtttggaaa gtctactcac gattgccttt ataatttgaa
004261 gttttgaacc taaccagcga gaaaatggaa atctaatgga ctacttgggt tgccttagtg
004321 gttgtatttt tgcttggatg ggttctggaa tttttgtcca cctaccatct ttgtttaaca
004381 attaacatgt caatttgacc gcagatatat tgtttactgt tgtttcactt gtctgcagat
004441 atattgtatg actcgtggtc accggcgatg accgttagtt ctgtttgtat cagtatcttg
004501 tccatgttgt caagctcacc agcaaaggtt atagagcttc actgtgtcct ctcctgttta
004561 aatggagatc atgcatctga ccatattata tgtttattat atgttggtgc agcaacgtcc
004621 tgccgacaat gatcgctatg tcaggaactg ccgcaatggg aggtcgccga aggagaccag
004681 gtggtggttt catgatgaca aagtgtgatt ggttccaact tccggttggc ttctcctcag
004741 caaccctttt acccgccacc ctacctttac atggcgtcct ccatgggaga tgatttaggc
004801 atatttttaa gcgatctatt tgaccgcaaa ttaacatgcc tttgtggttt gtaaatgaat
004861 gtgaacctgt atcgaatcct agacttatta attactatac cttggatata tagaataatt
004921 acatgtgtat cttgcttatt gc
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Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.