cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
General information
|
RAP - Accession No.
|
AK103648
Link to RAP-DB
(
IRGSP 1.0
)
|
RAP ID
|
Os03g0790600
(
IRGSP 1.0
)
|
RAP - Chromosome No.
|
3
|
RAP - Location, Length
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33758166 -
33765029
( + )
;
6864(bp)
|
Exon (Data source : RAP-DB)
|
Exon 1
|
Location |
33758166 -
33758574
( + )
;
409 (bp)
|
Exon 2
|
Location |
33759474 -
33759716
( + )
;
243 (bp)
|
Exon 3
|
Location |
33760002 -
33760154
( + )
;
153 (bp)
|
Exon 4
|
Location |
33760300 -
33760368
( + )
;
69 (bp)
|
Exon 5
|
Location |
33762606 -
33762693
( + )
;
88 (bp)
|
Exon 6
|
Location |
33763072 -
33763155
( + )
;
84 (bp)
|
Exon 7
|
Location |
33763419 -
33763507
( + )
;
89 (bp)
|
Exon 8
|
Location |
33763858 -
33763971
( + )
;
114 (bp)
|
Exon 9
|
Location |
33764438 -
33764572
( + )
;
135 (bp)
|
Exon 10
|
Location |
33764772 -
33765029
( + )
;
258 (bp)
|
Chromosome: 3
, position: 33,758,166
- 33,765,029
bp
|
|
|
Now loading
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Sequence (Data source : RAP-DB)
|
Nucleotide
Fasta Format
|
000001 gctcggggtg agcgtccgcg gccgcgtcgc ggtggcgatc cgaggaggag gctaccgcgg
000061 cggggtggtg cgccgcgccg cggaaaggag cgccgctgcc gttctcattg ccggccacgc
000121 ggacggcggg gtcgagaggg gcacggtaat cctcggaggc cccggcgacc cgctcacccc
000181 cgggtgggcc gccacggccg gggcggagcg cctggatttc gaccacgagg atgttaagcg
000241 gcggtttccg gccatcccat ctatgccggt gtcgggcaag acggcttcgg ctatcatacg
000301 gacactaggt ggcccggctt tgccggcgga ttggcagacc ggagttggac tcccggtgga
000361 tgtcggcggc gttggacctg gtcccactct ggtcaacttc acatatcagg tataaaatac
000421 aaatcgcctg gaggattgtc tatctatgat tactcgctta gagacaagga cgctgggtac
000481 gtttgcaggg aaacaggaat caaagccatg gaccgctcct ttgacctatc ttgactgggt
000541 tttccagtga taggctgttg ccattttgtt ttcaacttaa gagagacgtc tgtgctgaat
000601 ggggaaagag tcatcgtagt agtccatgtt gtaaactgcc gtgttgagat tctggataag
000661 ctcctaaatt gtttgagctg taaaagatgt cactacattt gcagtttgat taggaagcac
000721 agtaaccatt tccttgtccg cttgactatt ttggtttcag tggacagtgg tcctagcacc
000781 tgttgtttta ttagcccttt tttatatctg tggtagtgtg tacaaaacta caaatagcat
000841 tatgcttgat gttgagcgta ttgaccagcc tttgctcctt tgtagtgcat attggttaaa
000901 cttagttaga ttattattgt tacagattta tacagaatga gaaatattat tgtgggcata
000961 ctgagctatg agcaccaaat cattgagcac ttgtgacgta agttttgcaa gtggtatgct
001021 tttatggctc cctttgttat gttgctgtag gcctatttgt cattattctg tgttgtttct
001081 atatgctgga tctgttgtca tgtctctcaa ttggatgagc tatatatatt ggacaaataa
001141 agcattgcat aatagctgtc cgtgcttgtc ctccaggcaa gttagtgttt caggatgcat
001201 cttttctttt gcacagtttt gcatatttgt ataactggca gatgagacta tgttttagag
001261 ttaagtacaa tcaagaccat aatggttttc tcttatatct tatttaagga ggacaggaag
001321 atgggcatga tacaggatat ttttgctatt attaaagggt acgaagaacc tgatcgttac
001381 gttatccttg gtaaccaccg agatgcatgg acctatggag cagttgaccc taacagcggg
001441 acatctgcgc ttcttgatat tgctcggcgt cttggaataa tgctgcagtc aggctggaca
001501 ccacggagga ccatcattct ttgtagttgg gatgccgaag agtttggaat ggtgagttca
001561 tattaaagaa aattgagaat atgttgctga acaccatgtg aaaaaggaaa ccatgcagat
001621 gcccccacac cctaacattt tcaaagtaac atatatggca tttgcatttt atgaaaggaa
001681 ccccacaaaa aaatcatata tagttggcat gttcgtagct atccttttga atgaactttt
001741 ctggttgatt tgattcatct gtcacagttc tcaaagatct catttatttg tgtcccgttt
001801 atttcttttc tacattttga aggttctttt ttccagatcg gatcaactga atgggtcgaa
001861 gagaacctcg aagatctgca atcgaaagct gtagcttact taaatgttga ttgtgcggtg
001921 caaggaattg ggctttttgc tggttctacc ccccagttgg acaacctctt ggtcgatgtt
001981 acaagacagg tagagattaa tgtgtttcca ttgcattttt ctatgagctt gggttttcat
002041 ttagaaacct cagtccactc agctatttat accaaatttt agaattgttc tgaagtgaag
002101 ttatgtttat tcattcagaa ctttttgctt ctaggtaaaa gatccagatg ttgaaggaaa
002161 aacagtccat gatacatgga ataaaatgac cggaggcatc aatgtaagat ctcgaaggtt
002221 taaacatgct tttctatata catattgaga tgtactcaat ccaggttgtc actagctgtt
002281 ctaaactggt ttaaagtcaa acatcacttt tataatagcc atctagtggt cacactttgt
002341 acactacagg gttggtaact ttgaattatc tatgccgaca actaatcttc tgcatagtga
002401 gttactgagt tggttgttct tttgttttga gtttttagta gggtaaggta tgcagttcta
002461 cattgggtgc agttgctcca agtgcagggg gcaggcccat atagatctca gttcctagag
002521 tgagacatcc cccacacaag atatacttac gagatgtgct aatctggtgt cgtcgaatct
002581 ttgttgtagt cgacagtcta catgacaact atacaaaaat gaaagtgaaa attactactt
002641 gctatgcact gatcttatac ttctgacgtg agcaattcct tctttctttt tttcaaatcc
002701 ttacaaaaca ggtaatataa atacatgaaa ttgttattta gataaagata tatcgatatt
002761 ggtttagtag aacgcatcag tggcacaaag aacgaaccaa aaataatagt aataaaagat
002821 aacgataact tcatgtttca taacttcacc ttatataggc atctagccct caccaccttc
002881 atgggctaac gcaggcccct ggctgtggcc caggtggcct ggggcctgaa agtgaaaacc
002941 tattcataga aactagccaa atacaggctg ggccaacccg gaattaagcc cctgaccacc
003001 ttaaagctag ttgggggtgg cacctccaag ataaccctct aattattagg actatcacat
003061 agtatgaatt aactaattac ttggtatctg gctggttgat ctttcaaaat tgtttcgctg
003121 aaattctttg tcagaatttt tgaaaaacct tctgaatgaa atatggtcaa caatttatcc
003181 atcagcaatg attagttggc atgaacagct aattttgtaa catctggaat gactcccact
003241 catttttgtg tcaagcccac gtcataatta ctccaagcac tccaaatgat ggcttccata
003301 aataccatgg aaagctccaa accttacaaa atgtcatttg ctttccacga caatcagatt
003361 taccatttaa gggcgatacc tttatgtaga aaaaatttcc gttctgttga agttgacatg
003421 gctgtaccag ttgaaggtgc atgtgaaagt cagctgtatc ggttgcagag aataatcgct
003481 actcggttgt ctccatcaag ttgagcatgc aaggtctgga tcccacatgc aatcttagtg
003541 ctagtcaaaa ttcacacttt ctacatagaa ttgtggaata agataataac caaattgtgt
003601 cgatggatat tccagttcca ataaattagg ctacaaacta cctgtacctg gttatacatt
003661 ttttgtgttg catactgtta catattaaga atatgcagtc cgggtttatc actggactaa
003721 ctttggtcaa ggagcatcaa ggtgtgatgc atcacccagt tgctcactca acaactgtct
003781 caagtcccac tgtccctttg aaactcttgt ttccgaccat gcaattagat gccttggccc
003841 attgcttctc aaggcctcaa ccacatacta agtgctatac aacttggtcc ctaccatgtt
003901 aacccagcca ggacgtctga aataattgtc ctaactggcg cggggaaaac ctcacctata
003961 tcaggcacat gtatgtccca ctttcccatg cctatttacc agcgggtgca caaatacaat
004021 gtagattgat gaggtaccta tgatgtgtat gattaaaatc atgtgtatgt gtgaagtgta
004081 gaactgtaaa ttaggcaact aatttccaca gccagttcac gtgtccatga cactccatct
004141 gtcttgttcc ctgtcttcaa tgaacaaact gcttattgtg gtcctccttg ctgtagtacc
004201 ttccatcacc tcacttgtgt gcctgaaggg tgagtttctg gcgcaggagg ccaagcattc
004261 tgccagacgc ccgaggagcc attccatcta cttcactctg attttgtcta aactttttta
004321 ttgtgctgta aattaattac tatcgcttgc taccgtaagt gaaaaaaaat tctggttatg
004381 atcttttgag cgtctaactc atatatatgt tctgattatt tactgacaat gaattcgcag
004441 atagaaagac ttgccagaac tgattctgac tttgctccat ttctacatca tgctgggatc
004501 ccctgtatgg atttatacta tggaaaaggt attttaagca tgcaatcacg tctttctgtt
004561 tattattgtt aaattaactt ataactttcc ttttccttct ccaatatagc atgtaatata
004621 cggagaaaaa gacttgcttt ttttgctcaa aaaataaact gtttttttct caaaagagag
004681 aacagtatat gttttctaag cagaggacat taatgcaacc ccatttttta ggatcgttac
004741 tgcttgctca ttttttaaaa tattttgttg agctatgtga tttaattttg tacatctctc
004801 aatcgtttcc tggttccaag ataaagttag aagagacaaa atatttcccc atcaccccac
004861 tttctagaga gaatgcagga catcatctaa ctggtctaat acgcagaatt tcctggatat
004921 catacggctc ttgactcgta tcattggatg gaaaagcatg gtgatccact gtttcttcgt
004981 cacgtggcta gtaagtagca gtaatgatct tttaaaatga ttctgaaagg gagaaaatgt
005041 gcaatacctt acaaactaca attttgcttg ttcaaattac tgttaacttg aatgcactgg
005101 tacaagacca gtcaattatt ataaaaattc tatggactat cccatataga actagacata
005161 aggtcgcagc tgagtttggt atttttgtgc tttaaaatat gttgtacaca tctcttataa
005221 tactcatcat gctcatttac tttggctcaa cagttgtgga gatttgggga ctactggccc
005281 ttcgattagc agatgaccct gtgctgcctt ttgattatca aacatacgct tcccagttgc
005341 aggtacatcg attctttcag aattagcaca agcatttaac attttcatat gattggcatt
005401 tatcatcctg aaggactgta cgtgtatgtt tatgtagcat attcaatttt tgcttatgca
005461 atgggagctt gacccaaaaa cagggttttg ctcaaaacaa cattgtaatt gacaattttg
005521 aatgcacata tgctcaatct agttgaactg aactttagaa cacaaatata agtcacgcat
005581 gatgaccaac ttcatgggtt catagatcat attagagtag gggtatattt ccttttccca
005641 cagcatcatg gtctcatctt ctgatgtaca ttttgaactt gcaatgtcgc aggagcatgc
005701 aaatgcattc tctagtatga tggaaaatag caaatgggtt catttgctga atagatccat
005761 tgaagatctt tctgatgcag gcttagaatt tctgaaagag gcaaaggtat gttcaagaat
005821 ctttttttct tttgctttat attctgtttt gtctttctgt ttccatgtaa ttaggtagtc
005881 tgtagtccat tatagttgcg gttggctgaa gatattttct tctttagctc tttcactctg
005941 cacactgcat atcacttctg tatgtacaac cagtttgaaa cggcagtatg tatatttgga
006001 tatccaattt tatttagaca tttgcctttt gcagttttgc tgcacataca ggcaataact
006061 ttaatttctt agaacttagt aatccttttg gtgcctgaca tcacattatt gatgctttct
006121 cttaaaaatt attatatcag tacagttatt tttccattcc catgatggat gccatttatt
006181 ttgccacttg gatctcatgt tttaaatatt ttgtaccaat ctatattgcc gatgataacc
006241 ttattttctt ttgttgattt ggaacattct agaaattaca ggaccaaaat atatccgatg
006301 ggtactctct gatgaggcgg cgattgttga acgaccgtct tctacttgct gaaagaagct
006361 ttctgcaagc tgatggactt cagggaagag gatggttcaa gcatctggtg agccttaagt
006421 gggtcagcca tgaacccact tataggtcaa aataagcagg tctgcggctt attttggcct
006481 ataagtgggt ttcgcgggtt agccacttac actcttaagc ctcccgctat tcataagtca
006541 taagtcataa ccaaatttag aaaaaaaaaa tgttgtgcgt gaccacgctt ttatatttct
006601 tgctagatgt actcgcctcc ggaggactac gaaagcaagc tctcgttttt ccctggggtg
006661 gcggacgcca tctcccggtc gagcaatcga agcgcgaaag aacagcaggc ggcggtgcgg
006721 catgaggtgc ggaaaatctc tagggcaatc caaagagcag ctgatgttct tagaggcgaa
006781 ttcagtaata ggaacgaatc tttatactct agcctttctg tggctccata aaaactgtgt
006841 ataaataaaa tcgattgggg tttg
|
相同な Wheat 及び Barley の EST データはBLAST 結果の E-value が e-20 以下のものです。