cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA

General information
RAP - Accession No. AK101076     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os03g0324300 ( IRGSP 1.0 )
RAP - Chromosome No. 3
RAP - Location, Length 11,817,396 -  11,821,490  ( + ) ;   4,095(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 11,817,396 -  11,817,649 ( + ) ;   254 (bp)
Exon 2 Location 11,819,174 -  11,821,490 ( + ) ;   2,317 (bp)

Related Rice IDs
RAP Locus RAP ID KOME
Clone ID
KOME
Clone Name
KOME
Cluster ID
MSU ID cDNA
Accession No
Os03g0324300 Os03t0324300-01 211918 J033024C06 474 LOC_Os03g20780.1 AK101076
Os03g0324300 Os03t0324300-01 211918 J033024C06 474 LOC_Os03g20790.1 AK101076


Chromosome: 3 ,  position: 11,817,396 - 11,821,490 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format
000001 gtcgctgttg cacccaagcc accacccatt tcggcacacc cttccctcca cttgccgatt 
000061 acttttttgc cccccggcgc gctgggcgcc ttggctttgg ccctggcttt ggctccgctg 
000121 ttcttatctt ccccactcgt gcctggctct ctctctctcc ctttctcctc tcctccaagg 
000181 tcatggcaaa ggagaaataa cagctagcgg gcttggggaa gggaaaacag caagtgggag 
000241 atcggcaggg agaggtaggg agctcgatct cgcctttgct tgcttgctgc tatccccttc 
000301 tctttctgtt gtgggcttgc tgttctccat gtcctcctgt tgatggttgc ttgtgttcga 
000361 gtttttttct ttttttttct ttttttttct tggagaggat gtggttgtgt tcatgatagg 
000421 ttggtggtct gtgatctgtt tgggtagatc ttttgtcctc tttttcagat atttcgtgga 
000481 tgctagagct gcctgcggta gccaattcct gtttggctac ttcttcgttg ccctttattc 
000541 ccttccaatt ttattccgtg attttctgtt cttgtgcgta gaattgtttc tgccaagctt 
000601 gagtaaatcc atggcagagg tcaaagctta gcttttttca gattatacga tttgctgcca 
000661 gccaaaggag aaagggaaaa aaacttagaa attttctact agttttctct tgttgtgttc 
000721 attagatctc agagattaac ctaatttaag gaatacatgt tgtaaatcct gctctggaaa 
000781 tgttaagtgg ttgggtgtaa ggaagcatct tgttttgcat cgagtttatg gccaaaaaca 
000841 atcattgatg cttcctctaa ggcggtgtat gttttcctct gttctccatt tgatgtgttc 
000901 ttgatccatt ttcgtctctt gttttcttct gttcttttag atggcctccg attccttttg 
000961 ataagcacat gggtacatgt tcttgtttcc aacagtccat gccggtcgtg gtagaccgaa 
001021 aaaataatcc ataaaaatat atcctttttc tgaaatgttt ttcccgtgct tttctattcc 
001081 tttttcatct cccactttga tctgatcaag gcttgttgtt tcatgtgttt caaaatactt 
001141 cacggaaagg ataagaaaag gagaaatttc acatgtttaa gtttcttttg atccctactt 
001201 gtttcaaagc agcatgaaaa taccgtttca gctaatcccg tgcatcacaa aatgttttca 
001261 tgcttcggct ttgactaatt cttccgttag tactttattt atgatcatgt ctgaatcatg 
001321 atacctttat gctgtgtagt atgattatgt cacaacaaaa gataaccatg tcctatatga 
001381 ctgttaattg cgtgctctta actctgtgag aggattgcag gagatatgtc tgatcagata 
001441 aagatctctc tgtttcacca aacacatgca aaattaggct ctggcccttg cttcaatagg 
001501 caaacctaat tttactcgcg cgataatctc ctggtctcct ggctttctag atcttagaat 
001561 gttttctgaa gggaaacaaa ccagtactgc ctctttattt ttggtaatgg cgtaattgcc 
001621 gcattaggat gctgcggtaa ccgtagtcgt gttgcgcatg tattctcagt taaggaggta 
001681 gtagtaacac ttattgcgtt tagacgaagt aatcagttgc ttaaacttgg ttttgatttc 
001741 tgtaattaac atcagcttct tctcttgctt gtgtgcaggt gaattactac ttgagtagaa 
001801 gtggtacaag aagagtcgtc gtctacctgt gagcgaatta tttcgaggtt gtgcgttgcg 
001861 atgatgggag gtggtctggt gatggaccag ggcatgatgt tccccggcgt gcacaacttc 
001921 gtggatctcc tgcagcagaa cggcggcgac aagaacctcg gcttcggcgc gctcgtgccg 
001981 cagacgtcgt cgggggagca gtgcgtgatg ggggagggcg acctcgtgga cccgccgccg 
002041 gagagcttcc cggacgccgg tgaggacgac agcgacgacg acgtggagga catcgaggag 
002101 ctggagcgcc gcatgtggcg cgaccgcatg aagctgaagc ggctcaagga gctgcagctg 
002161 agccggggca aggaccccgc gggcggcgtc gtgggcgacc cgtccaagcc gcggcagtcg 
002221 caggagcagg cgcggcggaa gaagatgtcg cgcgcgcagg acggcatcct caagtacatg 
002281 ctcaagatga tggaggtgtg ccgcgcgcag gggttcgtgt acgggatcat cccggagaag 
002341 ggcaagccgg tgagcggcgc ctccgacaac ctccgcggct ggtggaagga gaaggtccgc 
002401 ttcgaccgca acggccccgc cgccatcgcc aagtaccagg ccgacaacgc cgtcccgggc 
002461 ttcgagagcg agctcgcctc cggcaccggg agcccgcact cgctgcagga gctgcaggac 
002521 accaccctcg ggtcgctgct ctcggcgctc atgcagcact gcgaccctcc gcagcggcgg 
002581 tacccgctcg agaagggcgt ccctccgccg tggtggccca ccggcgacga ggagtggtgg 
002641 ccggagctcg gcatccccaa ggaccagggc ccgcctccgt acaagaagcc ccatgacctc 
002701 aagaaggcct ggaaggtcag cgtgctcacc gctgtcatca agcacatgtc gccggacatc 
002761 gagaagatcc gccggctggt ccggcagtcc aagtgcctcc aggacaagat gaccgccaag 
002821 gagatctcca cctggctggc cgtcgtcaag caggaagagg agctgtacct gaagctgaac 
002881 cccggtgccc gccctccggc acctaccggc ggcatcacca gcgccatatc gttcaacgcc 
002941 agctcaagtg agtacgacgt cgacgtcgtc gacgactgca agggcgacga ggccggcaac 
003001 cagaaggctg ttgttgtcgc cgacccgacc gcgttcaacc tcggcgcggc tatgctgaac 
003061 gacaagttcc tcatgccggc gtccatgaag gaggaggcca ccgatgtcga gttcatccag 
003121 aagaggagcg cgtctggcgc ggagcctgag ctgatgctga acaaccgtgt ctacacctgc 
003181 cacaatgtcc agtgcccgca tagcgactat ggatacgggt tccttgaccg gaacgcgcgc 
003241 aacagccacc aatacacttg caagtacaat gatccactcc agcagagcac ggagaacaag 
003301 ccatcgccac cggccatctt cccggcaacc tacaacacgc cgaaccaggc tctgaacaat 
003361 ctggatttcg gcctgcccat ggatggccag aggtcaatta cagagctgat gaacatgtac 
003421 gacaacaact tcgtggccaa caagaacctt agcaacgaca atgccacgat catggagagg 
003481 cctaatgcag tcaacccaag gatacagatt gaagaaggct tttttggaca gggaagtggc 
003541 atcggcggca gcaacggagg tgtgttcgaa gatgtcaatg gcatgatgca gcaaccgcag 
003601 cagaccaccc cggcacagca gcagttcttc atccgcgacg atactccatt cggtaaccag 
003661 atgggcgaca tcaatggcgc atcggagttc aggttcggct ctggtttcaa catgtcaggt 
003721 gccgtcgaat accccggcgc aatgcagggc cagcagaaga atgacggcgc atcggagttt 
003781 gaggaattgg aatgatccta agagatagtg ctggccaagt tatttttaca tcatggcact 
003841 ctctggatta ttgcaccgag gtgctggaaa tctagcttac atttaagttt gcataccatt 
003901 aaaagaaaaa acttgtcgta atgttttact catttatgtc tagtttggtt ttttcctaac 
003961 tgagcgtttc aataataaat gtatagcaaa cttatttttt tactttgatt gaaatggaca 
004021 attttagaaa caagatgtat gtgagttgaa acatcgatta atatactccc aataagatat 
004081 tatctatact cctct

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Barley ESTs
Acc. No. Clone Name Length
AK248311 FLbaf51m23 2523
more... (Total Hit Count: 10 )
Hit Wheat ESTs
Acc. No. Clone Name Length
CJ906038 whthkles3h05 704
more... (Total Hit Count: 20 )
/rice/oryzabase