cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
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General information
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RAP - Accession No.
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AK100404
Link to RAP-DB
(
IRGSP 1.0
)
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RAP ID
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Os03g0738400
(
IRGSP 1.0
)
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RAP - Chromosome No.
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3
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RAP - Location, Length
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31,110,587 -
31,115,215
( + )
;
4,629(bp)
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Exon (Data source : RAP-DB)
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Exon 1
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Location |
31,110,587 -
31,110,728
( + )
;
142 (bp)
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Exon 2
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Location |
31,110,846 -
31,110,884
( + )
;
39 (bp)
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Exon 3
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Location |
31,111,001 -
31,111,087
( + )
;
87 (bp)
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Exon 4
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Location |
31,111,180 -
31,111,301
( + )
;
122 (bp)
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Exon 5
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Location |
31,111,442 -
31,111,518
( + )
;
77 (bp)
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Exon 6
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Location |
31,111,997 -
31,112,121
( + )
;
125 (bp)
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Exon 7
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Location |
31,112,359 -
31,112,451
( + )
;
93 (bp)
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Exon 8
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Location |
31,112,702 -
31,112,794
( + )
;
93 (bp)
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Exon 9
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Location |
31,112,878 -
31,113,075
( + )
;
198 (bp)
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Exon 10
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Location |
31,113,199 -
31,113,303
( + )
;
105 (bp)
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Exon 11
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Location |
31,113,397 -
31,113,462
( + )
;
66 (bp)
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Exon 12
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Location |
31,113,670 -
31,113,747
( + )
;
78 (bp)
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Exon 13
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Location |
31,114,006 -
31,114,117
( + )
;
112 (bp)
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Exon 14
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Location |
31,114,203 -
31,114,310
( + )
;
108 (bp)
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Exon 15
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Location |
31,114,452 -
31,114,626
( + )
;
175 (bp)
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Exon 16
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Location |
31,114,863 -
31,115,215
( + )
;
353 (bp)
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Chromosome: 3
, position: 31,110,587
- 31,115,215
bp
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Now loading
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Sequence (Data source : RAP-DB)
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Nucleotide
Fasta Format
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000001 aaaccccgag acccccccgc ctccaccacc acccgccgct cgccgctcgc ccaccatggc
000061 catggcgacg gcgctccgca agctctcctc cgacgccctc cgccgccagc cgctctcccg
000121 catcaccccg ctctactaca tggttccgct cttcttcctc cattttttct ttaatttttt
000181 tttgtttata tcgttgccct cttgagaaat ggtgcttaat ccgttccatg gattggtttg
000241 ggttcgtgcg ctctcgcagg cgtccctgcc ggcgacggag gagagatccg gagtcaccgt
000301 acgtgctctc tctctctctc tctctcttga ctatgtgttc cgttgctcgt tggtgtctgt
000361 ggtttgttca ttcgtttttt ttttattatt attttgtttg tgtgttggat gcagtggccg
000421 aagcagctga acgcgccgct ggaggaggtg gatcccgaga tcgccgacat catcgagcac
000481 gagaaggccc gccaatggaa ggtaaccagc aaccaccaaa aaaaaagtgc gtggattgtt
000541 cagtgtttgg tccaccgacg cattgctgaa ttgtggcaat ctgtttggtg cagggtctgg
000601 agctcatccc gtcggagaac ttcacctcgg tgtcagtgat gcaggcggtg ggatccgtca
000661 tgaccaacaa gtacagcgag gggtaccccg gcgcgagata ctacggtgga aacgagtacg
000721 gttgattgcg ttctatcggt tgcctttgtt cagattattt gggtgttaaa aatgtttaat
000781 ctgaaagaga aatcagtgcc tgatgggagt gaatgatgtg aatttctggt ggctctgggt
000841 tttccttgcg tgcagataca ttgatatggc cgagtcattg tgccagaaac gtgctttgga
000901 ggccttccgc ttggacccag cgaaatgggg aggtaaatca ttttcactct ttatcttgcc
000961 ttgtcatgtt tttatatgaa ctccagcttt catgcgcatc aatagccttt agtcctcttt
001021 tgtttcctgc tttgggcgat gtaaatgaaa aaaaaaaagg ataggggcaa aaaggttcct
001081 ttggataaga cacagttttt atggttccat agttcacaaa aaaaaaaaaa gggattttga
001141 tcagaaaatt tcttctaggt tcttaattta cttagcttcc tcactagtac aatgaaaaga
001201 ttacatcgtt tataaaccac tcggttcttc agtaacctga atacaaatgg tacacgagtg
001261 gtcctattca tttatatttt tcgaattgtt tgctttcatt attaaccgct ttgtacttaa
001321 atttatctag aatacttatt ctcaaaattt tagttttctt tctccaaaaa ggtggcattc
001381 taacttgaca accaatttct acctctgcag tgaatgtgca acctctatca gggtcacctg
001441 ccaacttcca tgtttacact gccctattga aaccacatga gagaatcatg gctttggatc
001501 ttcctcatgg tggacatctt tctcacggct accaggtaca tgggtctgga cttcttcatt
001561 gcctccttac tactagttgt ttcagttggc atgcaagcat aatgcttcct tccttgttgt
001621 ctttctttgt cctcacaagt ttttcaattc tctcatcgtt actatatacc aatgagtttc
001681 ttccccctca attcttagtt atgttcagat ataatgctct tggtactctc atcctcccat
001741 ggcttagttg ttcaacttct tgatggttgc agactgatac taagaagatt tcagcagttt
001801 cgatattctt tgagacaatg ccctacagat tggatgaaag cactggcttg attgattatg
001861 atcaggtgca atgtcctcct tatctgtttt gttttaatgc catttaactt attgaattct
001921 ctatcattct tttataggta tgagttttca ttggacaaaa cgtgttcttt ttgcatctag
001981 cagattccac agctgaaaat atggtttcaa gtagcattat ctaggatatt tttcattgcc
002041 tcatatctct ttcaattgtg aaattatttc aagatgaatt tctgctgaca tgcttgattt
002101 gctacttctg cacagatgga gaaaagtgcc gttcttttta ggccaaagtt gatcgttgcg
002161 ggtgcaagtg catatgcgcg tctttatgac tatgaccgca tgcggaaggt gaattttact
002221 gctcaatagt gcatgctgaa tcttcacctt ctgtaatcag tcaaataatt cacttgttat
002281 gcaatctgca ggtttgtgac aagcagaagg caatacttct agcagatatg gcacatatca
002341 gtgggcttgt cgcagctggt gttgttccat ctccttttga ttatgcagat gtagtgacta
002401 ccactactca caagtcactc cgtggaccac gtggagccat gatcttttac aggaaggggg
002461 tgaaaggagt aaacaagcaa ggcaaagagg tatatacttg agcagaacaa tagcaagata
002521 gtagcgtagg gtgttggtac tgtttcttct ccatcctgtg actctgtgag cttcaaaaaa
002581 ataaaaatgc ctaatgaccc tctaccgtct aggttatgta tgactttgag gacaagatca
002641 atgctgctgt cttcccaggt ctgcaaggtg gaccacataa tcataccatt actggcttag
002701 ctgttgcgct taagcaggtc tgtagcactt ctgatccctg atgttttata ttttatagat
002761 cacattgttt gcctttgtct tggactctaa aaggactttc taacttccag gcaactactc
002821 cggagtacag agcttatcaa gagcaagtta tgagtaactg tgcaaaattt gcacaggtat
002881 gtgttcaaat tttgctaggt tttttttttt atctacaata tggcttgatc tttctttatt
002941 tcacaacact taataatgat tttgttcttc acttagttca cctcagcatg ttacgaattg
003001 caaattattg gtttttcaac atgatgaatt gtgctttaac atttgaacca cttccttatc
003061 tggtggcaat ttatcacttc cagagcttga cagcaaaagg ctacgaactt gtctctggtg
003121 ggactgacaa ccatttagtg ttggtaaatc tcaagagcaa ggtaagacaa acatgtggga
003181 cgctttgggt gttttgagat attttagttc tatctttcag tttctcttat gagtgctcac
003241 caataaactt tcagctgctt ccttttaaaa aatatcgatt gatgtctatt taacctcaag
003301 cttgctgttt ctgtatataa atgatagcta aatgtgcttt gcagataaac ttgttttttt
003361 ttttcaaatt tttatgccat atggggacaa ttatcatcct cttcaaattt catgtttagg
003421 gcatagatgg ttcaagagtg gagaaggttt tagaaaacgt gcacattgca gcaaacaaga
003481 acacagttcc tggtgatgtt tcagctatgg taccaggagg catcaggatg ggtaaaatct
003541 gcccctatgt ggtttttttt ttaatttact taaaatagat ttgcaaaatc tcaatatcag
003601 ctccatgatc atgcaggaac cccagcactg acctcaagag gatttgttga ggaggacttt
003661 gctaaggttg ctgatttctt cgatgcagca gtgaacttgg ctttgaaggt taaggctgca
003721 gcaggtctgt caaattccta gttttttttt tgtttgaaaa tgttgagaat acaaaacaat
003781 tgttgcatgc attgaggtgc cctcatatga tacttcaccc taggatcatc gtattcatca
003841 ttttgttttt ccccttgcaa tttaggtgga acaaaactga aggactttgt tgccactttg
003901 caatctgata gcaacattca atccgagatt gcaaaacttc gccatgatgt ggaggaatat
003961 gcaaaacagt tccccacaat tgggtttgag aaagaaacca tgaagtacaa gaactaagaa
004021 actttgaatg gaacagcaag gtattgtcct gacagataaa ttggctccat ttttttttag
004081 catgctgcat gcagtatatt agttgcctag gccttggctc cgatcatgaa ccatgtttac
004141 tctttcattg ttgcctcagc ttgcacccct tccagttctt ccaccaccgc tccttcctgc
004201 atgccgtttt ccagaagcaa attaactgtg catttctgct atcagtcacc gaattcttct
004261 gtcgcattta tttcagggta aaagaaaagg catcaagctg aattcctgag gtgactgttg
004321 gaattcttgc aagaacaagt cggtgtaaac atatatccat ggagtgccat cttatgtaaa
004381 agggacccct ggcattttac agcgtgtgga aactttgtca atagttctta tcgtagacac
004441 ctactgtaag atgttatgct aatgctatat taaccttcac tatcttcttg gacaagcagt
004501 tacacatact ttggtgtatt ctgtgaataa ttcgcatgat tgcggaattt ttcgtgttta
004561 taaatcgtaa cttgtaatct tttggccctg cacgcaattt gaaagccctc gatcggattg
004621 tcgtttact
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Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.
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