cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
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General information
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RAP - Accession No.
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AK066643
Link to RAP-DB
(
IRGSP 1.0
)
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RAP ID
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Os01g0800500
(
IRGSP 1.0
)
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RAP - Chromosome No.
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1
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RAP - Location, Length
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35,627,061 -
35,634,026
( + )
;
6,966(bp)
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Exon (Data source : RAP-DB)
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Exon 1
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Location |
35,627,061 -
35,627,457
( + )
;
397 (bp)
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Exon 2
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Location |
35,627,594 -
35,627,681
( + )
;
88 (bp)
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|
Exon 3
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Location |
35,630,676 -
35,630,945
( + )
;
270 (bp)
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Exon 4
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Location |
35,631,039 -
35,631,147
( + )
;
109 (bp)
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|
Exon 5
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Location |
35,631,256 -
35,631,373
( + )
;
118 (bp)
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Exon 6
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Location |
35,631,474 -
35,631,606
( + )
;
133 (bp)
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Exon 7
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Location |
35,631,729 -
35,631,916
( + )
;
188 (bp)
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Exon 8
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Location |
35,631,989 -
35,632,175
( + )
;
187 (bp)
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Exon 9
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Location |
35,632,273 -
35,632,340
( + )
;
68 (bp)
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Exon 10
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Location |
35,632,516 -
35,632,609
( + )
;
94 (bp)
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Exon 11
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Location |
35,632,707 -
35,632,898
( + )
;
192 (bp)
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Exon 12
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Location |
35,633,079 -
35,633,159
( + )
;
81 (bp)
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Exon 13
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Location |
35,633,786 -
35,634,026
( + )
;
241 (bp)
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Chromosome: 1
, position: 35,627,061
- 35,634,026
bp
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Now loading
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Sequence (Data source : RAP-DB)
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Nucleotide
Fasta Format
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000001 cccgtgcagt tgccagttga ttggttcagc gtggctgcgc gcggcgcggg gcggacgggc
000061 agacgcgatc gacgacaggc accggctccg gctccatggc gcgcctcctt cttctgctcg
000121 tgctcatcgg cggcatctgc gccgccgccg cggcgagctc gccgctactc ccggcggcgg
000181 agacgatgcg cgtgagcttc gcggggaagt cggagttcag gacggtgaac aggaagccgc
000241 tgggtacgtg cctggacccg agcccgtacc tggagatcag cgtcagcacc ggcggggcgc
000301 cgctccccga cgaggcgttc ctcaacgtga ccgtctccgg cgtccgcagg cccgaccgct
000361 cccactggct cgccatgatc acgccttcaa actccaggtg aatgagaaaa tgcatgcaaa
000421 tcgatttcat catcactgta aacgtctctg tttgagtttg attggatcga tctcttcctc
000481 tggtaattaa tgcaactgtg tgcgagtaaa ttaattcatg gatgcgcatg cagtgtcttg
000541 gggtgccctc tgaacggtgt caattacatc gagacaggtg atctggcgag cctccctctt
000601 ctgtgccact accctgtcaa ggtgagttct tgcatgcaaa gacaaccgct ttttctatgc
000661 tcttaattaa cttgatctaa tttagctact agtagcagtt tgcaccagta actcttccac
000721 tgtagtagga ggaggattta gttgccacac accaacgtaa ccctgatcaa gcttgtcgat
000781 cagatctagt agtacgtata taacgtgaca tacgacactt gccatattaa atccttgatg
000841 atgtccacca tgtctgaaga tttccttaaa ttggttgttg agtccaagga aagacagcgg
000901 cgatagcaaa attaattggg acatttcgac aacgacgtgc taatcagatc gttagttgct
000961 acacggtgca gcaatgcctg tgctatataa gcctcacatg aatgatcatt cgtgaagcaa
001021 tcctatttgt caagagcgtc aggggcggcg gacctagttg tcatgggtct acatctgtac
001081 acctaaatac tttaacaaaa aattccagta tgtatcatgt atttatacta tggttagatc
001141 taaataattg tgtggttccc tccaccagaa acaccagttt caacccaacc aaatcacatg
001201 tggaactgcc tctgttttag tgtttgctca taggcctcaa cttttaaatt aaccaatggt
001261 ttcttgatta gctttatttt tgaacgagga tcttgcttga tttactttat acactcatta
001321 tgaaattcct gcgttctcca ctgtcaagcg tgctaatgac ctatcgtcaa cgtctcacat
001381 gcatgaagta tatatatata tggtaacggc acacacacat gcatgacagc atgactcaaa
001441 tcagacaacc tcgtaatatc tactctaaaa ctacctcagt ccacacttta ttcaaaaaaa
001501 aattaattct tacctataaa tctgaatata acgttatcta ggttcatttt tttttctgag
001561 cgaaaaaaat gcccatactt atccatgttc atagtttaaa tttgtttatt ctttttaaga
001621 tagagggagc accttatttg ggtagaattt tgttaataga gtcatcagca acaactagaa
001681 aagtgctcat gctttgttat aggtaaaaga caatacatta caaaatgcta tagacaatat
001741 atatattttt tatcaaatat gcatgttact atcacttcat tgcttattta aatatatata
001801 tattcacttg tttgaaataa atactggact attccataat atcataaatt atcaatggct
001861 catttataaa aattgcaaaa acaaagggtg agttggtcgt ggcatattca atgttatcat
001921 catcagtggc ttctaaagaa gtatatactc catccatttt atattataag ccgtttgatt
001981 cttttatgaa aattctttag gtttaattaa gtttataaaa ataattagca acatccacac
002041 cactaaatta gttttattaa atttaatact gaatatattt gatacgttgt tcgttttgta
002101 ttgaaatgta ttgctatttt ttttctataa actagcatag tggcccgcgc aaattgcgcg
002161 gctagcatca ttatattttc tttcatataa tagcatatat attttctcaa tgtattattc
002221 aaatatatta gaatggcaac ataatttaaa ttttgtacta actttacgaa actattaatg
002281 tgtaatattc atattgtatt ttatatgcgt gttagttatt aataatttta aatatcaaat
002341 tttagttatt tgtaaattat attcctatat ggactctaga ctcgtctttc aatatttctt
002401 ttctttaatt ccgatttttt gttttctgtg aattgtattt ctatataaac tctagactct
002461 tctttcaata ttatttattt ttaattctga atttttatta ttctaattgt atttttatgt
002521 gaactctaaa ctcatctttc aatattcttt aatttttaat ttcgaatttc agttacttct
002581 aaattatatt cttatattga ctttagactc ttcttcccat gtttttttaa tttcgaattg
002641 tagttatttg taaattgtag tatttttata tgaactctaa actctacttc taattttatt
002701 atgtttattc tgaattttag ttagttttaa atttcaatat ggactctata ctctacttct
002761 aatatttctt atttttaatt ctgaattcct attatttctt aattgtattt ctatacggac
002821 tctagtctcc tcttccaata ttccttattt ttaattccga atttctatta tttcttaatt
002881 atatttctat atggactcta tactctactt ctaatattcc ttatttttaa ttccgaattt
002941 ctattatttc ttaattctat ttctgcatgg actctagact cctcttctaa tatttcttat
003001 ttttaattcg gaatttctat tatttcttaa ttgtatttct atatggactc tacactctac
003061 ttctaatatt ccttattttt aatttcgaat ctattatatt attaaaggaa tagaaaaagg
003121 agcctccacg ttcgctctca tggcctagaa attctcacat taatcggaaa tataataaga
003181 aaataataga aattaggaat taaaaataag gaatattaga agtagagtat agagtccata
003241 tagaaataca attaagaaaa aaaaagaaat tcggaattaa aaataaggaa tattagaagt
003301 agagtataga gttcatatgg gaatttaaac taactaaaat tcagaataaa cataataaaa
003361 taaacttatt tttaattctg aattttaacc ttttctaaat tgtatttcta tatgaactct
003421 gtttttcttt ttctccgatt aatatgagaa tttctaggcc gtgagagcga acgtggaggc
003481 ttcgttttct attcctttaa taagttaata gattagttaa acttttgact aagaaaaaaa
003541 atcaaataat ttataatatg aaacgaaggg agtagttgcg atccagccaa aattttaacg
003601 gggccgggcg tgcaggccca gtacctgaca agcgacccgg gctacctggg ctgcaaggcc
003661 tcggcgtgcc agaagcgccg cgcgtccggc acctgcaagg tccggacctg cgccgccacg
003721 ctggcgttcc acgtcatcaa cttccgcacc gacgtcgagt tcgtcctctt ctccggcggc
003781 ttcgcgacgc cgtgcgtcct caagcgctcc ggtgcgctcc cgttcgccaa ccccgccaag
003841 ccgctccacg gccacctctc cagcgtcgac tccaaggcca cctcggtgag cacatctact
003901 atcatccaaa gcttttccac cttgcttttc tgcagctgca aatggagtaa tttgttgcat
003961 ttctgtatga tgaatcagat gaggcttacg tgggtgagcg gagacgcgag gccgcagcag
004021 gttcagtacg ggacgggcaa gactgctacc tctgtcgcca cgacattcac tcataaggac
004081 atgtgcagtg agtagtaatt aatcatgtgt tcatcactgg gaaaatgcaa tgtaaaagag
004141 gataattcaa tatcatgttt attatctcaa atggaatgaa aattccaatg tgcaggcatc
004201 gccgtgctgc cgagtcctgc gaaggacttc gggtggcatg atccgggtta catccattcg
004261 gcactcatga ccggtctcca gccatctcag tcctacaatt accgttacgg aaggtacagg
004321 ttcccccctt cttttttcac ttttttgctg taaaaattag cagttgtcac ttgtcagtaa
004381 catcctcaat acgggcttgc cgctgatgtg cagtgattcc gtgggttgga gtaacacaac
004441 cgaattcaga accccaccag ctgcaggttc aggcgagctg tccttcgtga tctttggtga
004501 tatggggaag gctccactgg acccatcagt ggaacactac attcaggtac acaaaatcct
004561 acattcctgc aaatgttcca ttttcattag cagctcgtac atttccgcgt ggtatatttg
004621 ctctgagaca acgatgatga ttggtgttaa acgatgcaaa atttgcagcc tggatcgacc
004681 tccgtggcca aagcagtagc tgcagagatg caaaccggaa aggtcgactc gatcttccac
004741 atcggagaca tcagctacgc cacgggcttc cttgtcgaat gggatttctt ccttcacctc
004801 atcacgccgc tcgcgtcgca ggtgtcctac atgaccgcca ttggtaacca cgagaggtga
004861 ttcctgcacc cagaacactg tgcatattct aggtgtggat gacaatgagc tgatgatgct
004921 ttcatcagag actatgcagg atctggatcg gtatatccga cgccggattc aggcggcgaa
004981 tgtggagtcc cctacgagtc ctacttcccc atgcctgctt ccggtaggga caaaccatgg
005041 tattcgatcg agcaagggag cgttcacttc gttgtgatgt ccaccgagca cgagtggtca
005101 gagaagtcag accaagtaag tgatcaaagt cacctttcta ttccttttca cttattcagg
005161 agtacatcgt ttacatgttc atgtcactct ccaaattttg ttgtgtgagt agtacaattg
005221 gatggaaatg gatttgtcat cggttgatag atcaagaaca ccatgggtga tcttcattgg
005281 gtaagctaaa tgatctttta ttcttctaaa aaatatatgt ttgcctagag atcaaacaaa
005341 caaaagatat tattttctga aacaaaacag gtaaaaaaat atgttccgta ctccagaatg
005401 caaattgtct gatactagaa agaattaaca cttgtcactt caatgaccgc tgcaggcata
005461 gaccaatgta ttcatccagc agcggtattc cgcccagcgt tgatccgaac ttcgtttcct
005521 ctgttgagcc actcttgctt aaccacaagg taagattgga atgcagcttt agtcacactt
005581 aaatctacct tcataagttc atagaatact agactataga aggatgtttt gatttatgat
005641 gaacaggtcg atttggtctt ctttggccat gtacacaact acgagagaac gtgtgcggta
005701 taccagggca attgcaaagg catgccaaag aaggacgcaa aaggagttga tacctacgat
005761 aacagcaact acgccgcacc tgttcatgcc gttgttggag caggggggtt caacttggat
005821 ggcttcccta agattggtgt aagagtcata tctacacctt tgtgtatgtt gttctcctag
005881 gcaattatag acatcgtttc aaactacata gtatggtggt aacaaattga tatactccta
005941 attgataaga acgcattaac gcctgaaaac tcacatactg ttaaagtgac aagcttgtct
006001 ttctgttaaa ttgttcagct gcatagctgg agcttatcaa ggatttcaga gtttggatat
006061 gccagggtac atgcgacgaa aactgatatg ttggttcagg tcagtccaca tatatatatt
006121 ctacctcggt ttctgttaac acgcttttta aattactgaa cggtgggttt tgtgtaaaaa
006181 ctttatatat ataagttcct ttaaaatata aaataaattt attttttaag tttgcaacaa
006241 ttaaacttaa ttaattatgt actgatggtt ttcttgtttt tcttacttta actttatctt
006301 catctttatt agaaaagaat atcacctgtc ttaactctca attctgtctc ttgtctaaat
006361 taaattctca taatgaaata ttccaactgg taaaatcatc attgctcaca agtacttcct
006421 ccgtttcacg atataagtca ttctagtatt tcccacattc atattgatgc taatgaatct
006481 agacatatat atatttgtct agattcatta gcatcaatat gaatgtggga atatatgtct
006541 agattcatta gcatcaatat gaatgtggga aatgctagaa tgacttacat tgtgaaacgg
006601 agggagtagt aaaataacta ttgcatggaa tgattgattt ttttttaaaa aaatgctact
006661 atctgagtaa gcaatggtgc atggctgcat ctcaagtctg aacaactgtt actctctttt
006721 ttcagtttgt aaactcgaac acgtcggcag tccaggacca atttaggatt gtgaagggag
006781 ccagatgatc caaccttaca agcaacttga tattcacaag gagaaacagt agctactttt
006841 ttttatttgt tagtatatat agctaggtac gctgtaaata gatgctgaat tacacacata
006901 aatgctatag actatcaggc tgtgtacgcg gctacaataa aattaatact atcatttttc
006961 tccctg
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Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.
Update info.
