cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
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General information
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RAP - Accession No.
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AK099321
Link to RAP-DB
(
IRGSP 1.0
)
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RAP ID
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Os03g0687000
(
IRGSP 1.0
)
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RAP - Chromosome No.
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3
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RAP - Location, Length
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28,224,509 -
28,229,745
( - );
5,237(bp)
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Exon (Data source : RAP-DB)
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Exon 1
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Location |
28,224,509 -
28,226,190
( - );
1,682 (bp)
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Exon 2
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Location |
28,229,201 -
28,229,418
( - );
218 (bp)
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Exon 3
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Location |
28,229,517 -
28,229,745
( - );
229 (bp)
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Chromosome: 3
, position: 28,224,509
- 28,229,745
bp
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Now loading
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Sequence (Data source : RAP-DB)
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Nucleotide
Fasta Format
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000001 gtatactctc actctgtctc ctcccccgcg tcggtcgctt cgcttctact ggaggagagc
000061 agaggtggtg gttggtgaga gaggatgcgc ggcggcggcg gcggcggcgg cggcggcggc
000121 gaggaggccg gccagaagct gaagagcatg gacgtcgaca agctggagaa cggcggcgac
000181 aagcccgccc tcaagtacca cggctggagg gccatgccct tcatcatagg tacggcgaga
000241 tcgccgattc gatcgttttc cccctccggc ggcgccggcg agcggcgatc ggcggctgat
000301 ggaggtgtgg ggggtttggg tgtgcaggga acgagacgtt cgagaagctg gggacgctgg
000361 ggacgtcggc gaacctgctg gtgtacctga cgcaggtgtt ccacatgcgg agcgtggacg
000421 cggcgacgct gctcaacggc ctcaacggca ccaccagcct cgcccccatc atcggcgcct
000481 tcctctccga cgcctacctc ggccgctacc tcgccctcgc catcgcctcc gtcgcctccc
000541 tcatcgtaag cccacctccc ctcctcctcc gccgccgccg ccacgcattc gcctcccaat
000601 tcgaggccgg gcttcgaatt ttgaggcgga tgtcgctgcg atttgggggc ggcgcgattt
000661 cgcttctcgg attcagattt gttttttttt ttaaaaaaaa aaagaaaatc gggagttggt
000721 ggcctctggc ttgtcagtag ctcggttggg tgttggactt tcgagttggc ctcttttttg
000781 ttattcttat ttttattttt cttttctctg cgatggaaat gggcggcaaa gtgagcgagg
000841 aaccacgtgc gcttgtgcgc tcgtgattat ttttaattaa ttaattcacg gcgaatgtgg
000901 attagaagag ttcaatcctt aattatttgg gcggtaaatt gaaacgacat tagtataatt
000961 tagttctgtg gtgaaattta tatccaaatt tttgctggaa ataatgggtt aatctgccaa
001021 tactagtagt agctttccca aagaggcggc ggcctacatc ggttagcctc gtgccctgca
001081 ttatctgctc cccttttgcc aaagcggcac tttgcagcgg cgcagtggct catgattagc
001141 gctcttctaa tccgtattat atgccctata atccactttt atctatcttt gtgggcagca
001201 gtattaattc tgcccacact agcagctggt tttctttttc tgataaccca tgtacaacaa
001261 caacacatca tcagtctaag ctagtagttg ttgcatgctc accctagttt tcttgtaaaa
001321 gaaaaaaggt atggcctatt tgacgtggac atatttacaa ttatatgtac aaatatatag
001381 gagtagtaca cctagttctg ttttgaatag cttcagctac acctctattg tagttggagc
001441 ccagctaaag tttcagctcc atctaaaata ggagtggggt tgggtagagc gctctcacaa
001501 aatgatctaa agaagtggag ctgggtttag accgatccac aactccactt cagacccaac
001561 tcctgaagct aaatttataa gtttgagctc taccaaatag tcacttaggt tgtgttcgtt
001621 agatggggtt gagagttaat ctcccgtgca cggaaaacag agtggtttat tagcatatga
001681 ttagttaagt taactctttt tattagttat tagcatatga tttattagta tttttctaaa
001741 aaaggaataa tatgattttt aaagctcttt ttctaaaaaa gaacttttgc aaaaaaaatg
001801 cattatttag gagtcgaggc agttggctgg gtctgtatta tttgtggatc tcacgtcgct
001861 aattttaagt tttaaacata ggaaactgtg tttgtaaggg aacttgttga gcatttggat
001921 tgggttagtg gatcatctcg atctgtgctg aatcctgaag tggactcgct tcctctcctc
001981 agtttgttta acctttcgcc tgtattaatt tcagtacaaa aataacatgg ggaccaaacg
002041 gtgccttggc ttgccaggca tgcaacacgg ataattttca agttttaatt aactctgttc
002101 aacaataata gtactacgta gtacaggggc ttggttggtg agatgcagtg tccactgtcc
002161 agttcaattt gtagttgtgt tttgacttga acggtgtctt tttctaaggc caaactctgg
002221 aaggccgtag cactgaaatc ccaagatcca acctggttac attatgtcat gttttcacac
002281 tgataatagt acctgattag actatcaaga cactattagt tagaacgggg aaatctcttg
002341 cgttttgttt ggatttgcag taattttgta cggttcatct agtaggagta caagtgctag
002401 aatcttgggg ggcctaggct aagcataaga actttctgct ctgtgctgtg ctgccaagtg
002461 caaagtgcaa tgagatgatg aacagtggca gccattgagg ctgaagtgag gttggggatc
002521 cggccatctt atccggacaa tctgtatgga ggtgactgcc aactaactgc gcaagtgggg
002581 tagtgtcctg gtgtggccat cgacattgac cagctagcta gctcaccccc aattcctgga
002641 atatatcagc attactgtac accattagta cttagctgcg cttgcatttc ggtacacctg
002701 tacaaaaaaa tcaattagtt tctcgcactt gctcgcacga aaacgatatg ctcccaagtg
002761 agagtcagtg ctgccatcca aagctccagg aattgactag tgagctgccc acgtcgcggc
002821 atcaatgtca caccacctcc ctaaccataa ccaacctgac tatcaccaac cacgtactag
002881 tactaatgac gtagtgtaat catgagcccc atttaggtag tagtactaag cgtgtaatag
002941 tatggtttga tagcgagagc cacttctgac gaatgatgct tgcgccgctg gtgctcgtgg
003001 gggcggtggg ccagctgctt gattctgaag gtcacttcta ttggaacggt aacataattt
003061 tatattggat aattttttca aattttatgt tattatttaa gtaaaaaaag gatcacacag
003121 ctgataatca gccataagag tgttcaaatc atcagattac aaatttaatt taaacagttt
003181 tcccggtttg tgtgctgtgc tcgcatgcat ctgttgtttt gggccgactg gttgtgcaga
003241 cagaactcgg cccaactaat ggcccattta agttcacatg ggttattaca cgaaactcaa
003301 agcccataat catccaattc aaaggccctc gtttttcgct tatgcttata acttatcaac
003361 taaaatttga attttcaatc ttaaatttga agctgatttt gaggttttct catcgaagtt
003421 tatttttcaa cctttgcttt taaatcgcta agaacaagta tataaaagtt ttattcacaa
003481 attacttttc gtttgcaaaa taacgatggc tccaatgtac taacgcatgg tttccttcca
003541 atgatggacg gacagggcat gttcttgctg acgatgacgg ccgccgcgga cgggctgcac
003601 ccggcggagt gcggggtggg ggagacgtgc tcgaaggcga cgtcggggca gttcgcggtg
003661 ctgttcatgt cgttcgcgtt cctggtgctg gggtcggcgg ggatccggcc gtgcagcatg
003721 ccgttcggcg ccgaccagtt cgacccccac acggagtccg gcaagcgcgg catcaacagc
003781 ttcttcaact ggtactactt caccttcacc tccgccatgc tcgtctccgc caccgtcatc
003841 atctacgtcc agagcaacgt cagctggccc atcggcctcg gcatccccac cgcgctcatg
003901 ctcctcgcct gcgtcctctt cttcatgggc accaggctct acgtccgcgt cacccccgag
003961 ggctccccct tcaccagcat cgtccaggtg ttcgccgccg cggcgaggaa gcggtcgctc
004021 aagcagccca aggaccccaa gcaggacctg ttcgacccgc cgcacaccag cgccatcgtc
004081 accaagctgg cgcacacgga ccagttccgg tgcctcgaca aggcggccat cgtgtccggc
004141 cccgacgacg tgcgcgccgg gggcgccgcg ccgtcgaacc cgtggaggct gtgcagcgtg
004201 cagcaggtgg aggaggtgaa gtgcctcatc cgcatcgtgc ccgtctggtc cacggggatc
004261 atctactacg tcgccgtcgt gcagcagtcg acctacgtgg tgttgtccgc gctgcagtcc
004321 gaccgacacc tcggccggag cttccagatc cccgcggcgt cgttcacggt gttcgccatg
004381 ctggcgcaga cgctgtggat ccccatctac gaccgcctcc tcgtgccgcg cctccgcagg
004441 gtcacgggca aggacgaggg cctcaccctc ctgcagcggc aggggatcgg gatcgcgctg
004501 tcgacggtgg cgatggtgat gtcggccgtg gtggaggacc ggaggcggca catcgcgctg
004561 acgcagccga cgctggggac gaccatcacc gggggcgcca tctcggccat gtccagcctg
004621 tggatggtgc cgcagctcat ggtgctgggg ctctcggagg cgttcaacct catcagccag
004681 atcgagttct actacaagga gatcccggag cacatgcgga gcgtggccgg cgcgctcgcc
004741 ttctgcaacc tggcgctggg gaactacctc agtgggttcc tcgtcaccat cgtgcaccgg
004801 accaccggcg ccgggagcaa ctggctggcg caggacctca acaaggggag gctcgacctc
004861 ttctactgga tgatcgccgg catcggcatc ttcaacatca tctacttcat gatctgcgcc
004921 aagtggtaca ggttcaaggg ggcagccgcc aactgagatg caagtgaagt gaagtttgtt
004981 cgtttgggtg gttaattaat tatgtcaatg gcagataatt aattggtgga gtgcttttag
005041 ctgggttttt tttttctgcc tcatcatttc tctcttgtat ttttgtatct gtggtgtctt
005101 gaattataaa atctatagga ttaagtgggt gaggaaagag aaggaaagaa acaaaagggt
005161 tggtttcttg taagtggtta aaattcaaag ataaatgaat cttcaatcct agtaaatcgc
005221 tacttgctgt ttgactg
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Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.
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