cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA
General information
RAP - Accession No. AK073709     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os03g0831200 ( IRGSP 1.0 )
RAP - Chromosome No. 3
RAP - Location, Length 35,812,061 -  35,813,391  ( + ) ;   1,331(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 35,812,061 -  35,812,380 ( + ) ;   320 (bp)
Exon 2 Location 35,812,479 -  35,812,592 ( + ) ;   114 (bp)
Exon 3 Location 35,812,713 -  35,813,391 ( + ) ;   679 (bp)

Related Rice IDs
RAP Locus RAP ID KOME
Clone ID		 KOME
Clone Name		 KOME
Cluster ID		 MSU ID cDNA
Accession No		 RiceXPro
FeatureNum		 Genomic Nucleotide
Accession No		 Genomic
Nucleotide GI		 Genomic Protein
Accession No		 Genomic
Protein GI		 RefSeq Genomic
Nucleotide
Accession No		 RefSeq Genomic
Nucleotide GI		 RefSeq RNA
Nucleotide
Accession No		 RefSeq RNA
Nucleotide GI		 RefSeq Genomic Protein
Accession No		 RefSeq Genomic
Protein GI
Os03g0831200 Os03t0831200-01 209875 J033058P14 11717 LOC_Os03g61570.1 AK073709 30716 AP008209.2 255674134 BAF13706.1 113550263 NC_008396.2 297602023 NM_001058327.1 115456382 NP_001051792.1 115456383
Os03g0831200 Os03t0831200-01 209875 J033058P14 11717 LOC_Os03g61570.2 AK073709 30716 AP008209.2 255674134 BAF13706.1 113550263 NC_008396.2 297602023 NM_001058327.1 115456382 NP_001051792.1 115456383


Chromosome: 3 ,  position: 35,812,061 - 35,813,391 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format 
000001 accaccacca ttccctcttc ttctcctcct ccttgcttct cccgcccctt aacccctact 
000061 gctccctccc agtagccggt gctaacccta gcttgctagc tagattgctc tctctggtag 
000121 tagtagatcc gtggagtgga gatctgcccg cggatcgagc ggcggcggca gagcaccagc 
000181 cgtgtctgcg gcgcggtgtg cgcgggtgtt gcggagcggc ggctgagcgg aggtgtggga 
000241 ggagggggag tgctgcggct tccggggtgt tagatccgcc gatcctggcg ccggagatgg 
000301 attcctcgtc ggtcgagaag gtgaagcttc cgatccgtgg gttcttgggg ggctcgatct 
000361 gtggctggaa tggcgccttg gctgggtggt tttttgacgc tcgatctgtg ggttgcaggg 
000421 gagtgggtcg atagatccgg acgagcgcac ggcctccggc gagcccaagg cgtgcaccga 
000481 ctgccacacc accaagactc cgctctggcg cggcggcccc tccggcccca aggtgagatg 
000541 agatccgatc tgctcctcct gctcttccct ttctcgatct gtgcattttt ttcgcctggg 
000601 ttttcggtgg ttgatccgcc cgatctgtgt tttttttttt gctttgatcc agtcgctgtg 
000661 caacgcgtgc gggatccggt accggaagaa gagacgggag gcgctggggc tcgacgccgg 
000721 cgagggcggc gcggagcggc aggagaagaa gaagagcaag agggagagag gggaggaggt 
000781 gaccatggag ctccgcatgg tggggttcgg gaaggaggtg gtcctgaagc agcggcggcg 
000841 gatgcggcgg aggagacgcc tcggcgagga ggagaaggcg gccatcctcc tcatggccct 
000901 ctcctccgga gtcatctacg cctgaaccac caccctacct acctacccac ctagcaacag 
000961 caagagagag agaagcagag gaaaggaggc agccatggga aagagtgatt tgcttgctta 
001021 acatgcatga tctcaaccgg gagagactag acagatctct accctttttt ttcttctccc 
001081 ctgcttagtt tttccagcta attagttcga tcaaagtgga agccaagtta ataatgatga 
001141 tgatgatgta gtagctgctg ttcttcctgt tactgttact tgttcttgcc tagctgtaat 
001201 gttactagta gtgtttttag tagagcgtgt aacgttgcaa tgtaagaaag agcttatgat 
001261 ccatcttctt tctcttgttc tttgcaagag attagctcct ggatctgcac caagtaatgc 
001321 agtttttcag c

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Barley ESTs  
Acc. No. Clone Name Length
BY837043 baet116a08 497 view details
Hit Wheat ESTs
Acc. No. Clone Name Length
CJ791681 whatl2m14 497
more... (Total Hit Count: 6 )
/rice/oryzabase