cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA

General information
RAP - Accession No. AK066180     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os01g0975300 ( IRGSP 1.0 )
RAP - Chromosome No. 1
RAP - Location, Length 44,865,082 -  44,866,630  ( + ) ;   1,549(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 44,865,082 -  44,866,630 ( + ) ;   1,549 (bp)

Related Rice IDs
RAP Locus RAP ID KOME
Clone ID
KOME
Clone Name
KOME
Cluster ID
MSU ID cDNA
Accession No
RiceXPro
FeatureNum
Os01g0975300 Os01t0975300-01 201594 J013058H19 1509 LOC_Os01g74410.1 AK066180 22118
Os01g0975300 Os01t0975300-01 201594 J013058H19 1509 LOC_Os01g74410.2 AK066180 22118


Chromosome: 1 ,  position: 44,865,082 - 44,866,630 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format
000001 attgtattat actagcttgc ttgttcaatt caatcgagca gtagctaatt gcatagtgat 
000061 cgatcgatct gtatagatgg tggtggccgg caagaagcag ggacggcatt ctttttctgc 
000121 atcatcatcg tcgtcttcgt cttcttcttg ttcagtagtg cagctgggtc atcatcagcg 
000181 cccacagggt gaggaccctc tcatcggcat caaagcagca gcagcaggag gaggaggaat 
000241 aatgagaaag ggcccgtgga cggagcagga ggacgtgcag ttggtttggt tcgtgcggct 
000301 gctgggcgaa cggcggtggg atttcttagc aaaggtgtca ggtttgcgcg gcggcgggtg 
000361 atgagcatat gcgtgcgtgc atctaatcta tcgattaatt gttgatgatg tcgatcagat 
000421 ggatggatgc atgcatatgc cgtacatagt agatttgatg atagtaactg acataaatat 
000481 aatgtatgcg tgcgatcaac gctggttgtt ggatcgtccg tcgtgtgtat gggtggtgtg 
000541 tggctgatgc aggtttgcag cgcagcggga agagctgccg tctccggtgg gtgaactacc 
000601 tgcatccagg gctgaagcga gggaggatga gccccgagga ggagaggatg gtggtgcagc 
000661 tccacgccaa gctcggcaac aggtggtctc gcatcgccaa gagcattcct ggccgcaccg 
000721 acaacgagat caagaactac tggcgcaccc acctgcgcaa gctcaagctc aaacagcaaa 
000781 agcagcagca gtccgacgac caccacaacg acaacgacga cgacgacgac cgcaactcct 
000841 cctcctcttc gtcctcctcc aacagcaaca gcaacctgca gcagcagccg cagccagagg 
000901 atgagtcgtc ggccagtggc agcctgcagg cccaacatca tgaggaccag caccaactgt 
000961 tccttcatcc tctctggaac gacgacatca tcgtcgacgt cgactgctgg agcagcagca 
001021 ccaacgtcgt cgctccgccg ccgatgcccg cctcgccgct ctgggatatc gatgacgcct 
001081 tcttctgctc ggattattcg ctacctctct ggggatagta tatatcatcc atcagccgcc 
001141 aagacgatga cgactacatc aactcgatcg atcgatgcct cctaatcatg tgggagtact 
001201 cagctcatct caattgttac atccttgcta cagctgctaa ttactgtaat tactagcttg 
001261 catataggga tcgacggagg aattaatata tacatgttag taactcgttc tatagcgcaa 
001321 cttgcagttg catctcaatc tctgatcagt actatataaa tatatatata tgtaacagct 
001381 gctagctata gctagctgcg tacacatcca tatgaatgtg tgtgtgttca tgcttgtact 
001441 gcctcttgta gtatatgcac atatacgtgc aagtgcaaca gacggctgct ggctgatata 
001501 ttttgatcag cgcgccacgt gcacgtgcat acgtttcttc atttctggc

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Barley ESTs
Acc. No. Clone Name Length
AV932650 baal1i09 619
more... (Total Hit Count: 3 )
Hit Wheat ESTs
Acc. No. Clone Name Length
CJ627249 whcs10m14 793
more... (Total Hit Count: 2 )
/rice/oryzabase