|
|
|
Locus Name |
D4Mit27 |
Chromosome |
4
|
MGI Position (cM) |
42.5
|
Position (cM) |
31.32
|
Ensembl Chromosome |
4
|
Position (bp)(Length)(Chr.)(OLD) |
88535063-88535210 (148) (Chr.4)
|
Position (GRCm38) |
89063832-89063979 (150) (Chr.4)
|
Contact person |
Yoshiaki KIKKAWA |
Sequence |
Complete Sequence
|
|
Polymorphism |
CAST>NC>DBA>A/J>B6>129>PGN2>CBA=MSM=SK/Cam=JF1=NJL=SWN>SWR>SM>BLG2 |
Strains / Fragments (bp) |
B6
|
SM
|
SWR
|
129
|
A/J
|
CBA
|
DBA
|
NC
|
PGN2
|
SK/Cam
|
NJL
|
BLG2
|
SWN
|
MSM
|
JF1
|
CAST
|
151 |
115 |
116 |
138 |
153 |
117 |
154 |
158 |
119 |
117 |
117 |
106 |
117 |
117 |
117 |
166 |
|
|
|
PCR table |
MgCl2 (mM) |
1.5 |
Taq polymerase |
AmpliTaq Gold |
Thermal cycler |
GeneAmp 9700 |
PCR buffer |
AmpliTaq Gold buffer |
|
denature |
anneal |
extension |
cycle |
extension step (72 c) |
pcr |
cycle 1 |
c |
94 |
55 |
72 |
40 |
|
min |
0.5 |
0.5 |
1 |
cycle 2 |
c |
|
|
|
|
|
min |
|
|
|
cycle 3 |
c |
|
|
|
|
|
min |
|
|
|
remarks |
|
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|