 |
 |
| |
Locus Name |
D16Mit90 |
| Chromosome |
16
|
| MGI Position (cM) |
28.1
|
| Position (cM) |
27.43
|
| Ensembl Chromosome |
16
|
| Position (bp)(Length)(Chr.)(OLD) |
38630215-38630311 (97) (Chr.16)
|
| Position (GRCm38) |
38710883-38710979 (97) (Chr.16)
|
| Contact person |
Yoshiaki KIKKAWA |
| Sequence |
Complete Sequence
|
| |
| Polymorphism |
CAST>PGN2>B6>DBA=NC=SK/Cam=CBA>A/J=SWR>129=SM>NJL=BLG2>JF1>MSM=SWN |
| Strains / Fragments (bp) |
B6
|
SM
|
SWR
|
129
|
A/J
|
CBA
|
DBA
|
NC
|
PGN2
|
SK/Cam
|
NJL
|
BLG2
|
SWN
|
MSM
|
JF1
|
CAST
|
| 94 |
90 |
92 |
90 |
92 |
93 |
93 |
93 |
96 |
93 |
70 |
70 |
68 |
68 |
69 |
99 |
|
|
| |
| PCR table |
| MgCl2 (mM) |
1.5 |
| Taq polymerase |
AmpliTaq Gold |
| Thermal cycler |
GeneAmp 9700 |
| PCR buffer |
AmpliTaq Gold buffer |
| |
denature |
anneal |
extension |
cycle |
extension step (72 c) |
| pcr |
cycle 1 |
c |
94 |
55 |
72 |
40 |
|
| min |
0.5 |
0.5 |
1 |
| cycle 2 |
c |
|
|
|
|
|
| min |
|
|
|
| cycle 3 |
c |
|
|
|
|
|
| min |
|
|
|
| remarks |
|
|
|
|
|
