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NIG-RNAi Strains Detail
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Stock Detail (Last Update: November 2007_FlyBase version FB2007_11)
 Stock ID 9882R-3 
 Symbol Art7  Full Name Arginine methyltransferase 7 
 CG No CG9882  Old CG No CG9882 
 Synonyms DART7, CG9882, Art7 
 Accession No (Link to NCBI) NM_137909.2 
 Inserted Chr. ll 
 Insertional Mutation  semi-lethal 
 Phenotype induced by Act5C-GAL4 at 28 degrees semi-lethal 
 Map Viewer
 Reference
[Please submit your publication] 		Tiwari P, Kumar A, Das RN, Malhotra V, VijayRaghavan K.
A Tendon Cell Specific RNAi Screen Reveals Novel Candidates Essential for Muscle Tendon Interaction.
PLoS One (2015) 10(10) e0140976 [ PubMed ID = 26488612 ] [ RRC reference ]

Gonsalvez GB, Praveen K, Hicks AJ, Tian L, Matera AG.
Sm protein methylation is dispensable for snRNP assembly in Drosophila melanogaster.
RNA (2008) 14(5) 878-87 [ PubMed ID = 18369183 ] [ RRC reference ]  
 Comment  
 Sequence (Last Update: July 10, 2007_NCBI RefSeq Release 24)
 Primer Seq. 5' 
aaggcctacatggccggaccgAGCGCGGCGATGACTACGACT 
 Primer Seq. 3' 
aatctagaggtaccAGATTGCGCCACCTGGGCATA 
 Predicted Fragment Size 
500 
 IR fragment full Seq 
0001 AGCGCGGCGA TGACTACGAC TACCACCTGG AGGTGGCCAA CGCCGGATTC GGCGACATGC 
0061 TGCACGACTG GGAGCGCAAC CAGAAGTACT TCGCCGCTCT GAGAAAGACC ATAGCCGGAA 
0121 TGCGTGAGGC GGGCAGGGAG GTGCACGTGC TGGACATCGG CACGGGCACG GGAATCCTGT 
0181 CGATGATGGC CTTGGCAGCA GGAGCGGATT CGGTGACCGC TTGCGAGGCC TTCCTGCCAA 
0241 TGGCCAATTG CGCGGAGAAA ATTCTGGCGG CCAACGGAGC TGGCGACAAG GTGCGTCTCA 
0301 TCCGAAAGCG ATCCACAGAG ATCCAAGTGG GCGAGGATAT GCCGCGAAAG GCGAATCTGC 
0361 TAGTGGCCGA GCTGCTGGAT ACAGAACTGA TTGGCGAGGG TGcCATCGGC ATCTACAACC 
0421 ATGCCCACGC CGAACTGCTG ACCGAGGACG CTCTCTGCAT TCCCGCGCGC GCCAGATgCT 
0481 ATGCCCAGGT GGCGCAATCT  
 in silico PCR Fragment 
0001 AGCGCGGCGA TGACTACGAC TACCACCTGG AGGTGGCCAA CGCCGGATTC GGCGACATGC 
0061 TGCACGACTG GGAGCGCAAC CAGAAGTACT TCGCCGCTCT GAGAAAGACC ATAGCCGGAA 
0121 TGCGTGAGGC GGGCAGGGAG GTGCACGTGC TGGACATCGG CACGGGCACG GGAATCCTGT 
0181 CGATGATGGC CTTGGCAGCA GGAGCGGATT CGGTGACCGC TTGCGAGGCC TTCCTGCCAA 
0241 TGGCCAATTG CGCGGAGAAA ATTCTGGCGG CCAACGGAGC TGGCGACAAG GTGCGTCTCA 
0301 TCCGAAAGCG ATCCACAGAG ATCCAAGTGG GCGAGGATAT GCCGCGAAAG GCGAATCTGC 
0361 TAGTGGCCGA GCTGCTGGAT ACAGAACTGA TTGGCGAGGG TGCCATCGGC ATCTACAACC 
0421 ATGCCCACGC CGAACTGCTG ACCGAGGACG CTCTCTGCAT TCCCGCGCGC GCCAGATGCT 
0481 ATGCCCAGGT GGCGCAATCT  
 Assemble Data 

9882R-3.IR_full       1   AGCGCGGCGATGACTACGACTACCACCTGGAGGTGGCCAACGCCGGATTCGGCGACATGC 60
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
9882R-3.in silico     1   AGCGCGGCGATGACTACGACTACCACCTGGAGGTGGCCAACGCCGGATTCGGCGACATGC 60


9882R-3.IR_full       61  TGCACGACTGGGAGCGCAACCAGAAGTACTTCGCCGCTCTGAGAAAGACCATAGCCGGAA 120
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
9882R-3.in silico     61  TGCACGACTGGGAGCGCAACCAGAAGTACTTCGCCGCTCTGAGAAAGACCATAGCCGGAA 120


9882R-3.IR_full       121 TGCGTGAGGCGGGCAGGGAGGTGCACGTGCTGGACATCGGCACGGGCACGGGAATCCTGT 180
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
9882R-3.in silico     121 TGCGTGAGGCGGGCAGGGAGGTGCACGTGCTGGACATCGGCACGGGCACGGGAATCCTGT 180


9882R-3.IR_full       181 CGATGATGGCCTTGGCAGCAGGAGCGGATTCGGTGACCGCTTGCGAGGCCTTCCTGCCAA 240
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
9882R-3.in silico     181 CGATGATGGCCTTGGCAGCAGGAGCGGATTCGGTGACCGCTTGCGAGGCCTTCCTGCCAA 240


9882R-3.IR_full       241 TGGCCAATTGCGCGGAGAAAATTCTGGCGGCCAACGGAGCTGGCGACAAGGTGCGTCTCA 300
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
9882R-3.in silico     241 TGGCCAATTGCGCGGAGAAAATTCTGGCGGCCAACGGAGCTGGCGACAAGGTGCGTCTCA 300


9882R-3.IR_full       301 TCCGAAAGCGATCCACAGAGATCCAAGTGGGCGAGGATATGCCGCGAAAGGCGAATCTGC 360
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
9882R-3.in silico     301 TCCGAAAGCGATCCACAGAGATCCAAGTGGGCGAGGATATGCCGCGAAAGGCGAATCTGC 360


9882R-3.IR_full       361 TAGTGGCCGAGCTGCTGGATACAGAACTGATTGGCGAGGGTGCCATCGGCATCTACAACC 420
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
9882R-3.in silico     361 TAGTGGCCGAGCTGCTGGATACAGAACTGATTGGCGAGGGTGCCATCGGCATCTACAACC 420


9882R-3.IR_full       421 ATGCCCACGCCGAACTGCTGACCGAGGACGCTCTCTGCATTCCCGCGCGCGCCAGATGCT 480
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
9882R-3.in silico     421 ATGCCCACGCCGAACTGCTGACCGAGGACGCTCTCTGCATTCCCGCGCGCGCCAGATGCT 480


9882R-3.IR_full       481 ATGCCCAGGTGGCGCAATCT 500
                          ||||||||||||||||||||
9882R-3.in silico     481 ATGCCCAGGTGGCGCAATCT 500



 
 Off-target information (Last Update: November 4, 2007_NCBI RefSeq Release 26)
 Off-target search result

cv : coefficient of variation

(0 mm hits / total siRNA count)

mm : mismatch
cv 0mm 1mm 2mm 3mm target transcript off target name
100   482  0  0  0  NM_137909.2  CG9882-RA (Art7), mRNA 
0.2   1  3  5  7  NM_057324.3  CG5109-RA (Pcl), mRNA 
0   0  3  3  2  NM_058101.3  CG6627-RA (Dnz1), mRNA 
0   0  2  4  5  NM_140351.2  CG11010-RA (Ent3), mRNA 
0   0  2  3  2  NM_079432.2  CG9750-RA (rept), mRNA 
0   0  2  3  2  NM_139892.1  CG12262-RA (CG12262), mRNA 
0   0  2  2  8  NM_132012.1  CG15776-RA (CG15776), mRNA 
0   0  2  2  5  NM_169594.2  CG3389-RA (Cad88C), mRNA 
0   0  2  2  3  NM_143285.1  CG6051-RA (CG6051), mRNA 
0   0  1  3  10  NM_166341.1  CG30127-RA (CG30127), mRNA 
0   0  1  3  4  NM_141354.2  CG10287-RA (Gasp), mRNA 
0   0  1  3  3  NM_058020.3  CG7398-RA, transcript variant A (Trn), mRNA 
0   0  1  3  3  NM_168160.1  CG7398-RB, transcript variant B (Trn), mRNA 
0   0  1  3  3  NM_168161.1  CG7398-RC, transcript variant C (Trn), mRNA 
0   0  1  3  2  NM_134825.3  CG9967-RA, transcript variant A (CG9967), mRNA 
0   0  1  3  2  NM_001014461.1  CG9967-RB, transcript variant B (CG9967), mRNA 
0   0  1  2  7  NM_080161.1  CG3496-RA (vir), mRNA 
0   0  1  2  6  NM_165037.1  CG6043-RC, transcript variant C (CG6043), mRNA 
0   0  1  2  5  NM_139536.1  CG11505-RB, transcript variant B (CG11505), mRNA 
0   0  1  2  5  NM_168007.1  CG11505-RA, transcript variant A (CG11505), mRNA 
0   0  1  2  4  NM_079012.2  CG8085-RB, transcript variant B (RN-tre), mRNA 
0   0  1  2  4  NM_130669.2  CG2701-RA (CG2701), mRNA 
0   0  1  2  3  NM_001038878.1  CG2956-RB, transcript variant B (twi), mRNA 
0   0  1  2  3  NM_079092.2  CG2956-RA, transcript variant A (twi), mRNA 
0   0  1  2  3  NM_132641.1  CG15743-RA (CG15743), mRNA 
0   0  1  2  2  NM_136077.1  CG10623-RA (CG10623), mRNA 
0   0  0  9  10  NM_169783.1  CG31243-RB, transcript variant B (cpo), mRNA 
0   0  0  9  10  NM_169781.1  CG31243-RE, transcript variant E (cpo), mRNA 
0   0  0  9  10  NM_080105.2  CG31243-RF, transcript variant F (cpo), mRNA 
0   0  0  9  10  NM_169782.1  CG31243-RA, transcript variant A (cpo), mRNA 

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