Notice:
|
Suspension of shipments during Golden Week Holidays: From 30 April to 14 May, deadline 17 April.
|
|
NIG-RNAi Strains Detail |
Request : Click the "Order" button to request for this stock |
|
Stock Detail (Last Update: November 2007_FlyBase version FB2007_11) |
Stock ID |
9882R-1 |
Symbol |
Art7 |
Full Name |
Arginine methyltransferase 7 |
CG No |
CG9882 |
Old CG No |
CG9882 |
Synonyms |
DART7, CG9882, Art7 |
Accession No (Link to NCBI) |
NM_137909.2 |
Inserted Chr. |
ll |
Insertional Mutation |
|
Phenotype induced by Act5C-GAL4 at 28 degrees |
lethal |
Map Viewer |
|
Reference
[Please submit your publication]
|
Tiwari P, Kumar A, Das RN, Malhotra V, VijayRaghavan K. A Tendon Cell Specific RNAi Screen Reveals Novel Candidates Essential for Muscle Tendon Interaction. PLoS One (2015) 10(10) e0140976
[
PubMed ID = 26488612
]
[
RRC reference
]
Gonsalvez GB, Praveen K, Hicks AJ, Tian L, Matera AG. Sm protein methylation is dispensable for snRNP assembly in Drosophila melanogaster. RNA (2008) 14(5) 878-87
[
PubMed ID = 18369183
]
[
RRC reference
]
Umemori M, Habara O, Iwata T, Maeda K, Nishinoue K, Okabe A, Takemura M, Takahashi K, Saigo K, Ueda R, Adachi-Yamada T. RNAi-mediated knockdown showing impaired cell survival in Drosophila wing imaginal disc. Gene Regul Syst Bio (2009) 3 11-20
[
PubMed ID = 19838331
]
[
RRC reference
]
|
Comment |
|
Sequence (Last Update: July 10, 2007_NCBI RefSeq Release 24) |
Primer Seq. 5' |
aaggcctacatggccggaccgAGCGCGGCGATGACTACGACT |
Primer Seq. 3' |
aatctagaggtaccAGATTGCGCCACCTGGGCATA |
Predicted Fragment Size |
500 |
IR fragment full Seq |
0001 AGCGCGGCGA TGACTACGAC TACCACCTGG AGGTGGCCAA CGCCGGATTC GGCGACATGC
0061 TGCACGACTG GGAGCGCAAC CAGAAGTACT TCGCCGCTCT GAGAAAGACC ATAGCCGGAA
0121 TGCGTGAGGC GGGCAGGGAG GTGCACGTGC TGGACATCGG CACGGGCACG GGAATCCTGT
0181 CGATGATGGC CTTGGCAGCA GGAGCGGATT CGGTGACCGC TTGCGAGGCC TTCCTGCCAA
0241 TGGCCAATTG CGCGGAGAAA ATTCTGGCGG CCAACGGAGC TGGCGACAAG GTGCGTCTCA
0301 TCCGAAAGCG ATCCACAGAG ATCCAAGTGG GCGAGGATAT GCCGCGAAAG GCGAATCTGC
0361 TAGTGGCCGA GCTGCTGGAT ACAGAACTGA TTGGCGAGGG TGcCATCGGC ATCTACAACC
0421 ATGCCCACGC CGAACTGCTG ACCGAGGACG CTCTCTGCAT TCCCGCGCGC GCCAGATgCT
0481 ATGCCCAGGT GGCGCAATCT |
in silico PCR Fragment |
0001 AGCGCGGCGA TGACTACGAC TACCACCTGG AGGTGGCCAA CGCCGGATTC GGCGACATGC
0061 TGCACGACTG GGAGCGCAAC CAGAAGTACT TCGCCGCTCT GAGAAAGACC ATAGCCGGAA
0121 TGCGTGAGGC GGGCAGGGAG GTGCACGTGC TGGACATCGG CACGGGCACG GGAATCCTGT
0181 CGATGATGGC CTTGGCAGCA GGAGCGGATT CGGTGACCGC TTGCGAGGCC TTCCTGCCAA
0241 TGGCCAATTG CGCGGAGAAA ATTCTGGCGG CCAACGGAGC TGGCGACAAG GTGCGTCTCA
0301 TCCGAAAGCG ATCCACAGAG ATCCAAGTGG GCGAGGATAT GCCGCGAAAG GCGAATCTGC
0361 TAGTGGCCGA GCTGCTGGAT ACAGAACTGA TTGGCGAGGG TGCCATCGGC ATCTACAACC
0421 ATGCCCACGC CGAACTGCTG ACCGAGGACG CTCTCTGCAT TCCCGCGCGC GCCAGATGCT
0481 ATGCCCAGGT GGCGCAATCT |
Assemble Data |
9882R-1.IR_full 1 AGCGCGGCGATGACTACGACTACCACCTGGAGGTGGCCAACGCCGGATTCGGCGACATGC 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
9882R-1.in silico 1 AGCGCGGCGATGACTACGACTACCACCTGGAGGTGGCCAACGCCGGATTCGGCGACATGC 60
9882R-1.IR_full 61 TGCACGACTGGGAGCGCAACCAGAAGTACTTCGCCGCTCTGAGAAAGACCATAGCCGGAA 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
9882R-1.in silico 61 TGCACGACTGGGAGCGCAACCAGAAGTACTTCGCCGCTCTGAGAAAGACCATAGCCGGAA 120
9882R-1.IR_full 121 TGCGTGAGGCGGGCAGGGAGGTGCACGTGCTGGACATCGGCACGGGCACGGGAATCCTGT 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
9882R-1.in silico 121 TGCGTGAGGCGGGCAGGGAGGTGCACGTGCTGGACATCGGCACGGGCACGGGAATCCTGT 180
9882R-1.IR_full 181 CGATGATGGCCTTGGCAGCAGGAGCGGATTCGGTGACCGCTTGCGAGGCCTTCCTGCCAA 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
9882R-1.in silico 181 CGATGATGGCCTTGGCAGCAGGAGCGGATTCGGTGACCGCTTGCGAGGCCTTCCTGCCAA 240
9882R-1.IR_full 241 TGGCCAATTGCGCGGAGAAAATTCTGGCGGCCAACGGAGCTGGCGACAAGGTGCGTCTCA 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
9882R-1.in silico 241 TGGCCAATTGCGCGGAGAAAATTCTGGCGGCCAACGGAGCTGGCGACAAGGTGCGTCTCA 300
9882R-1.IR_full 301 TCCGAAAGCGATCCACAGAGATCCAAGTGGGCGAGGATATGCCGCGAAAGGCGAATCTGC 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
9882R-1.in silico 301 TCCGAAAGCGATCCACAGAGATCCAAGTGGGCGAGGATATGCCGCGAAAGGCGAATCTGC 360
9882R-1.IR_full 361 TAGTGGCCGAGCTGCTGGATACAGAACTGATTGGCGAGGGTGCCATCGGCATCTACAACC 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
9882R-1.in silico 361 TAGTGGCCGAGCTGCTGGATACAGAACTGATTGGCGAGGGTGCCATCGGCATCTACAACC 420
9882R-1.IR_full 421 ATGCCCACGCCGAACTGCTGACCGAGGACGCTCTCTGCATTCCCGCGCGCGCCAGATGCT 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
9882R-1.in silico 421 ATGCCCACGCCGAACTGCTGACCGAGGACGCTCTCTGCATTCCCGCGCGCGCCAGATGCT 480
9882R-1.IR_full 481 ATGCCCAGGTGGCGCAATCT 500
||||||||||||||||||||
9882R-1.in silico 481 ATGCCCAGGTGGCGCAATCT 500
|
Off-target information (Last Update: November 4, 2007_NCBI RefSeq Release 26) |
Off-target search result
cv : coefficient of variation
(0 mm hits / total siRNA count)
mm : mismatch
|
cv |
0mm |
1mm |
2mm |
3mm |
target transcript |
off target name |
100 |
482 |
0 |
0 |
0 |
NM_137909.2 |
CG9882-RA (Art7), mRNA |
0.2 |
1 |
3 |
5 |
7 |
NM_057324.3 |
CG5109-RA (Pcl), mRNA |
0 |
0 |
3 |
3 |
2 |
NM_058101.3 |
CG6627-RA (Dnz1), mRNA |
0 |
0 |
2 |
4 |
5 |
NM_140351.2 |
CG11010-RA (Ent3), mRNA |
0 |
0 |
2 |
3 |
2 |
NM_079432.2 |
CG9750-RA (rept), mRNA |
0 |
0 |
2 |
3 |
2 |
NM_139892.1 |
CG12262-RA (CG12262), mRNA |
0 |
0 |
2 |
2 |
8 |
NM_132012.1 |
CG15776-RA (CG15776), mRNA |
0 |
0 |
2 |
2 |
5 |
NM_169594.2 |
CG3389-RA (Cad88C), mRNA |
0 |
0 |
2 |
2 |
3 |
NM_143285.1 |
CG6051-RA (CG6051), mRNA |
0 |
0 |
1 |
3 |
10 |
NM_166341.1 |
CG30127-RA (CG30127), mRNA |
0 |
0 |
1 |
3 |
4 |
NM_141354.2 |
CG10287-RA (Gasp), mRNA |
0 |
0 |
1 |
3 |
3 |
NM_058020.3 |
CG7398-RA, transcript variant A (Trn), mRNA |
0 |
0 |
1 |
3 |
3 |
NM_168160.1 |
CG7398-RB, transcript variant B (Trn), mRNA |
0 |
0 |
1 |
3 |
3 |
NM_168161.1 |
CG7398-RC, transcript variant C (Trn), mRNA |
0 |
0 |
1 |
3 |
2 |
NM_134825.3 |
CG9967-RA, transcript variant A (CG9967), mRNA |
0 |
0 |
1 |
3 |
2 |
NM_001014461.1 |
CG9967-RB, transcript variant B (CG9967), mRNA |
0 |
0 |
1 |
2 |
7 |
NM_080161.1 |
CG3496-RA (vir), mRNA |
0 |
0 |
1 |
2 |
6 |
NM_165037.1 |
CG6043-RC, transcript variant C (CG6043), mRNA |
0 |
0 |
1 |
2 |
5 |
NM_139536.1 |
CG11505-RB, transcript variant B (CG11505), mRNA |
0 |
0 |
1 |
2 |
5 |
NM_168007.1 |
CG11505-RA, transcript variant A (CG11505), mRNA |
0 |
0 |
1 |
2 |
4 |
NM_079012.2 |
CG8085-RB, transcript variant B (RN-tre), mRNA |
0 |
0 |
1 |
2 |
4 |
NM_130669.2 |
CG2701-RA (CG2701), mRNA |
0 |
0 |
1 |
2 |
3 |
NM_001038878.1 |
CG2956-RB, transcript variant B (twi), mRNA |
0 |
0 |
1 |
2 |
3 |
NM_079092.2 |
CG2956-RA, transcript variant A (twi), mRNA |
0 |
0 |
1 |
2 |
3 |
NM_132641.1 |
CG15743-RA (CG15743), mRNA |
0 |
0 |
1 |
2 |
2 |
NM_136077.1 |
CG10623-RA (CG10623), mRNA |
0 |
0 |
0 |
9 |
10 |
NM_169783.1 |
CG31243-RB, transcript variant B (cpo), mRNA |
0 |
0 |
0 |
9 |
10 |
NM_169781.1 |
CG31243-RE, transcript variant E (cpo), mRNA |
0 |
0 |
0 |
9 |
10 |
NM_080105.2 |
CG31243-RF, transcript variant F (cpo), mRNA |
0 |
0 |
0 |
9 |
10 |
NM_169782.1 |
CG31243-RA, transcript variant A (cpo), mRNA |
|
Wing Disc |
GFP
|
Puc
|
Caspase
|
DAPI
|
Merge
|
Figure
|
JNK signal
N |
|
++ |
|
DB |
|
++ |
|
DC |
|
++ |
|
DM |
|
++ |
|
VM |
|
+ |
|
VB |
|
+ |
|
|
Caspase-3 signal
N |
|
++ |
|
DB |
|
++ |
|
DC |
|
++ |
|
DM |
|
++ |
|
VM |
|
++ |
|
VB |
|
++ |
|
|
Dcompartment |
|
Penetrance |
+ |
|
|
|
|
|
|