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NIG-RNAi Strains Detail
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Stock Detail (Last Update: November 2007_FlyBase version FB2007_11)
 Stock ID 9571R-2 
 Symbol CG9571  Full Name CG9571 
 CG No CG9571  Old CG No CG9571 
 Synonyms Dmcg9571, CG9571 
 Accession No (Link to NCBI) NM_134525.1 
 Inserted Chr. lll 
 Insertional Mutation   
 Phenotype induced by Act5C-GAL4 at 28 degrees lethal 
 Map Viewer
 Reference
[Please submit your publication] 		Nitta Y, Yamazaki D, Sugie A, Hiroi M, Tabata T.
DISCO Interacting Protein 2 regulates axonal bifurcation and guidance of Drosophila mushroom body neurons.
Dev Biol (2017) 421(2) 233-244 [ PubMed ID = 27908785 ] [ RRC reference ]  
 Comment  
 Sequence (Last Update: July 10, 2007_NCBI RefSeq Release 24)
 Primer Seq. 5' 
aaggcctacatggccggaccgCGCTGCTCTCCGTGGACAAAA 
 Primer Seq. 3' 
aatctagaggtaccACCGTGCCCGTGCCCATAATA 
 Predicted Fragment Size 
500 
 IR fragment full Seq 
0001 CGCTGCTCTC CGTGGACAAA AAGGAGGAGT CCCCCATTTC GAAGCACAAC TCAGGAAGCA 
0061 GCTTCAGCTC ATGCTCGAGC TCCAGTTCCA ACTCCAGCTC GGATTCGATG GCTGCAAAGA 
0121 GCAATGCAAA GCCGGCTTTC ACCTACAGCG CCCTCATAGT GATGGCCATC TGGAGCAGCT 
0181 CCGAGAAGCG TTTGACCCTA AGCGTGATCT GCAAGTGGAT CGCGGACAAC TTCCCGTACT 
0241 ATCGCACCCG CAAGAGCGTC TGGCAGAACT CGATCCGGCA CAACCTGAGT CTCAATCCGT 
0301 TCTTCGTTCG GGTGCCGCGA GCTCTCGATG ATCCTGGACG TGGCCACTAC TGGGCACTCG 
0361 ATCCGTATGC CGAGGATCTG TCCATTGGCG AGACGACGGG ACGCCTGCGC CGCAGCAATT 
0421 GGCAGCAGAA TACGGTGGCG AGACCCAAGG TCACAGGTCA TCCCTATCAG CGAATGCCAT 
0481 ATTATGGGCA CGGGCACGGT  
 in silico PCR Fragment 
0001 CGCTGCTCTC CGTGGACAAA AAGGAGGAGT CCCCCATTTC GAAGCACAAC TCAGGAAGCA 
0061 GCTTCAGCTC ATGCTCGAGC TCCAGTTCCA ACTCCAGCTC GGATTCGATG GCTGCAAAGA 
0121 GCAATGCAAA GCCGGCTTTC ACCTACAGCG CCCTCATAGT GATGGCCATC TGGAGCAGCT 
0181 CCGAGAAGCG TTTGACCCTA AGCGGGATCT GCAAGTGGAT CGCGGACAAC TTCCCGTACT 
0241 ATCGCACCCG CAAGAGCGTC TGGCAGAACT CGATCCGGCA CAACCTGAGT CTCAATCCGT 
0301 TCTTCGTTCG GGTGCCGCGA GCTCTCGATG ATCCTGGACG TGGCCACTAC TGGGCACTCG 
0361 ATCCGTATGC CGAGGATCTG TCCATTGGCG AGACGACGGG ACGCCTGCGC CGCAGCAATT 
0421 GGCAGCAGAA TACGGGGGCG AGACCCAAGG TCACAGGTCA TCCCTATCAG CGAATGCCAT 
0481 ATTATGGGCA CGGGCACGGT  
 Assemble Data 

9571R-2.IR_full       1   CGCTGCTCTCCGTGGACAAAAAGGAGGAGTCCCCCATTTCGAAGCACAACTCAGGAAGCA 60
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
9571R-2.in silico     1   CGCTGCTCTCCGTGGACAAAAAGGAGGAGTCCCCCATTTCGAAGCACAACTCAGGAAGCA 60


9571R-2.IR_full       61  GCTTCAGCTCATGCTCGAGCTCCAGTTCCAACTCCAGCTCGGATTCGATGGCTGCAAAGA 120
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
9571R-2.in silico     61  GCTTCAGCTCATGCTCGAGCTCCAGTTCCAACTCCAGCTCGGATTCGATGGCTGCAAAGA 120


9571R-2.IR_full       121 GCAATGCAAAGCCGGCTTTCACCTACAGCGCCCTCATAGTGATGGCCATCTGGAGCAGCT 180
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
9571R-2.in silico     121 GCAATGCAAAGCCGGCTTTCACCTACAGCGCCCTCATAGTGATGGCCATCTGGAGCAGCT 180


9571R-2.IR_full       181 CCGAGAAGCGTTTGACCCTAAGCGTGATCTGCAAGTGGATCGCGGACAACTTCCCGTACT 240
                          |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
9571R-2.in silico     181 CCGAGAAGCGTTTGACCCTAAGCGGGATCTGCAAGTGGATCGCGGACAACTTCCCGTACT 240


9571R-2.IR_full       241 ATCGCACCCGCAAGAGCGTCTGGCAGAACTCGATCCGGCACAACCTGAGTCTCAATCCGT 300
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
9571R-2.in silico     241 ATCGCACCCGCAAGAGCGTCTGGCAGAACTCGATCCGGCACAACCTGAGTCTCAATCCGT 300


9571R-2.IR_full       301 TCTTCGTTCGGGTGCCGCGAGCTCTCGATGATCCTGGACGTGGCCACTACTGGGCACTCG 360
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
9571R-2.in silico     301 TCTTCGTTCGGGTGCCGCGAGCTCTCGATGATCCTGGACGTGGCCACTACTGGGCACTCG 360


9571R-2.IR_full       361 ATCCGTATGCCGAGGATCTGTCCATTGGCGAGACGACGGGACGCCTGCGCCGCAGCAATT 420
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
9571R-2.in silico     361 ATCCGTATGCCGAGGATCTGTCCATTGGCGAGACGACGGGACGCCTGCGCCGCAGCAATT 420


9571R-2.IR_full       421 GGCAGCAGAATACGGTGGCGAGACCCAAGGTCACAGGTCATCCCTATCAGCGAATGCCAT 480
                          ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
9571R-2.in silico     421 GGCAGCAGAATACGGGGGCGAGACCCAAGGTCACAGGTCATCCCTATCAGCGAATGCCAT 480


9571R-2.IR_full       481 ATTATGGGCACGGGCACGGT 500
                          ||||||||||||||||||||
9571R-2.in silico     481 ATTATGGGCACGGGCACGGT 500



 
 Off-target information (Last Update: November 4, 2007_NCBI RefSeq Release 26)
 Off-target search result

cv : coefficient of variation

(0 mm hits / total siRNA count)

mm : mismatch 		 

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