| Stock Detail (Last Update: November 2007_FlyBase version FB2007_11) |
| Stock ID |
9325R-3 |
| Symbol |
hts |
Full Name |
hu li tai shao |
| CG No |
CG9325 |
Old CG No |
CG9325 |
| Synonyms |
Hts, adducin, HTS, 1B1, CG9325, Adducin, Ovhts, l(2)k06121, HtsF, HtsRC, htsRC, EST D, HTS-RC, ADD-87, Add-hts, Add, l(2)k14523, l(2)00634, anon-EST:Posey9, l(2)01103, hts |
| Accession No (Link to NCBI) |
NM_057529.2 |
| Inserted Chr. |
ll |
| Insertional Mutation |
|
| Phenotype induced by Act5C-GAL4 at 28 degrees |
male pupal lethal |
| Map Viewer |
|
Reference
[Please submit your publication]
|
Cho Y, Lai CM, Lin KY, Hsu HJ.
A Targeted RNAi Screen Reveals Drosophila Female-Sterile Genes That Control the Size of Germline Stem Cell Niche During Development.
G3 (Bethesda) (2018) 8(7) 2345-2354
[
PubMed ID = 29764959
]
[
RRC reference
]
|
| Comment |
balanced with SM6a, Cy
|
| Sequence (Last Update: July 10, 2007_NCBI RefSeq Release 24) |
| Primer Seq. 5' |
aaggcctacatggccggaccgGGATCAAACGGATCGGGAGCG |
| Primer Seq. 3' |
aatctagaggtaccACAGTTCTGGTGCCGAGTTGC |
| Predicted Fragment Size |
500 |
| IR fragment full Seq |
0001 GGATCAAACG GATCGGGAGC GACCAGAAGC GGAGCAGGAG GAAAGTTTTC ACTGCGCAGG
0061 CGACAGTGGT ATTGGCGATT CCACCGGCCG GCGTCCGCGT CTGGCCACCA CCAGCAATGA
0121 TTCGTCGATT CAAGAGGCCG AAGCCTACAC CCAGGGCAAG CACGTCAAGT TGACCTTGAG
0181 CAGCTCACCC ACGCCGACGG CCACACAGTC ACCTGCAACC ATCGAAATTC TTATCAACGT
0241 ATCGCTGCGC AATGCCGAGT GCGTCCAAAC GGTCCAGACC CATGAGCAGG AGTTTCGCGC
0301 CAAGTTGGAG CGAGNTAATC GACGAGGAGA TCCACTATAT TTCGCAGCAA CTCGCATTTA
0361 AACAGCGACA GGCAGAGTTG CATGAACAAC AGACTACATC GCGGGCTCCA ATCGCTACGC
0421 CCTTCTTTCA CAACTATGCA TCCGCCGGCA CCGGCTTCTT CATCATCCAT GGTTCACCGC
0481 AGCAACTCGG CACCAGAACT GT |
| in silico PCR Fragment |
0001 GGATCAAACG GATCGGGAGC GACCAGAAGC GGAGCAGGAG GAAAGTTTTC ACTGCGCAGG
0061 CGACAGTGGT ATTGGCGATT CCACCGGCAG GCGTCCGCGT CTGGCCACCA CCAGCAATGA
0121 TTCGTCTATT CAAGAGGCCG AAGCCTATAC CCAGGGCAAG CACGTCAAGT TGACCTTGAG
0181 CAGCTCACCC ACGCCGACGG CCACACAGTC ACCTGCAACC ATCGAAATTC TTATCAACGT
0241 ATCGCTGCGC AATGCCGAGT GCGTCCAAAC GGTCCAGACC CATGAGCAGG AGTTTCGCGC
0301 CAAGTTGGAG CGAG-TAATC GACGAGGAGA TCCACTATAT TTCGCAGCAA CTCGCATTTA
0361 AACAGCGACA GGCAGAGTTG CATGAACAAC AGACTACATC GCGGGCTCCA ATCGCTACG-
0421 CCTTCTTTCA CAACTATGCA TCCGCCGGCA CCGGCTTCTT CATCATCCAT GGTTCACCGC
0481 AGCAACTCGG CACCAGAACT GT |
| Assemble Data |
5541R-2.IR_full 1 ACATGGACGCGGATTCTCCTGCCGTTCCTCTCCTGCCTACTCCTCGCTGTCCAGGCGGAT 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
5541R-2.in silico 1 ACATGGACGCGGATTCTCCTGCCGTTCCTCTCCTGCCTACTCCTCGCTGTCCAGGCGGAT 60
5541R-2.IR_full 61 CTGGTGAATGTCACCTGCGGGGAGTATGGCAATACCATCACTTGCGACTGCAATAACTCC 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
5541R-2.in silico 61 CTGGTGAATGTCACCTGCGGGGAGTATGGCAATACCATCACTTGCGACTGCAATAACTCC 120
5541R-2.IR_full 121 GACCAGACCATGGCTTTGCCATCGTTGCGCGGAAATGTCTACATGATTGAGATCCGCAAT 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
5541R-2.in silico 121 GACCAGACCATGGCTTTGCCATCGTTGCGCGGAAATGTCTACATGATTGAGATCCGCAAT 180
5541R-2.IR_full 181 TGCCGCGATCTTCTGGTGGAGGCCAATCGGCTGGCGAACACGATGGGCCTGCACAAGGTG 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
5541R-2.in silico 181 TGCCGCGATCTTCTGGTGGAGGCCAATCGGCTGGCGAACACGATGGGCCTGCACAAGGTG 240
5541R-2.IR_full 241 GTCTTCCGCCAGGTGGGCCAANCTGNTGCTCCGGGAGCACGCGCTCAGTGTGCCGCGATA 300
||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||
5541R-2.in silico 241 GTCTTCCGCCAGGTGGGCCAA-CTGGTGCTCCGGGAGCACGCGCTCAGTGTGCCGCGATA 300
5541R-2.IR_full 301 TGCCAGCAATAAGGCACTGATCGTGGAGTTCGAGCAGACGAACCTCAAGCTGATCGAATC 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
5541R-2.in silico 301 TGCCAGCAATAAGGCACTGATCGTGGAGTTCGAGCAGACGAACCTCAAGCTGATCGAATC 360
5541R-2.IR_full 361 GCATGCCATCAACGGCAACATCGAGGAGATCTCATTCGTGGGCGGGCGAATTGAGCTAAT 420
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
5541R-2.in silico 361 GCATGCCATCAACGGCAACATCGAGGAGATCTCATTCGTGGGCGGGCGGATTGAGCTAAT 420
5541R-2.IR_full 421 GAAGCCTTTCGGATTCACCACCACCAAGGATAGTGCCATACTGCTCAAGCTGGACGGGGT 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
5541R-2.in silico 421 GAAGCCTTTCGGATTCACCACCACCAAGGATAGTGCCATACTGCTCAAGCTGGACGGGGT 480
5541R-2.IR_full 481 CACCATTCAGCGCATCGAGAG 501
|||||||||||||||||||||
5541R-2.in silico 481 CACCATTCAGCGCATCGAGAG 501
|
| Off-target information (Last Update: November 4, 2007_NCBI RefSeq Release 26) |
Off-target search result
cv : coefficient of variation
(0 mm hits / total siRNA count)
mm : mismatch
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