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Notice:
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Suspension of shipments during Golden Week Holidays: From 30 April to 14 May, deadline 17 April.
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| NIG-RNAi Strains Detail |
| Request : Click the "Order" button to request for this stock |
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| Stock Detail (Last Update: November 2007_FlyBase version FB2007_11) |
| Stock ID |
8068R-1 |
| Symbol |
Su(var)2-10 |
Full Name |
Suppressor of variegation 2-10 |
| CG No |
CG8068 |
Old CG No |
CG8068 |
| Synonyms |
dPIAS, ZimpB, Su(Var)2-10, zimp, DPIAS, PIAS, i184, CG8068, dpias, ZimpA, Dpias, l(2)03697, CLOT2057, Suvar(2)10, Su-var(2)10, Su(var)2-10, ZIMP |
| Accession No (Link to NCBI) |
NM_078940.2 |
| Inserted Chr. |
lll |
| Insertional Mutation |
|
| Phenotype induced by Act5C-GAL4 at 28 degrees |
lethal |
| Map Viewer |
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Reference
[Please submit your publication]
|
Cao X, Rojas M, Pastor-Pareja JC.
Intrinsic and damage-induced JAK/STAT signaling regulate developmental timing by the Drosophila prothoracic gland.
Dis Model Mech (2022) 15(1)
[
PubMed ID = 34842272
]
[
RRC reference
]
Ohhara Y, Nakamura A, Kato Y, Yamakawa-Kobayashi K.
Chaperonin TRiC/CCT supports mitotic exit and entry into endocycle in Drosophila.
PLoS Genet (2019) 15(4) e1008121
[
PubMed ID = 31034473
]
[
RRC reference
]
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| Comment |
|
| Sequence (Last Update: July 10, 2007_NCBI RefSeq Release 24) |
| Primer Seq. 5' |
aaggcctacatggccggaccgGTCGAGCTGCAAAAAATCCTG |
| Primer Seq. 3' |
aatctagaggtaccCGATTAGAGGCAATCTCGGTG |
| Predicted Fragment Size |
500 |
| IR fragment full Seq |
0001 NTCGAGCTGC AAAAAATCCT GTCGTTTCTG AACATCTCAT TCGCTGGACG AAAAACTGAC
0061 CTGCAGAGCC GCATCCTCTC GTTCTTGCGC ACCAACTTGG AACTGCTTGC CCCGAAGGTC
0121 CAGGAAGTCT ACGCCCAGTC CGTGCAGGAA CAAANACGCC ACGCTGCAGT ACATCGACCC
0181 AACCAGGATG TACTCGCACA TCCAGCTGCC GCCCACCGTG CAGCCCAATC CCGTGGGCCT
0241 CGTGGGCAGC GGCCAAGGTG TGCAAGTGCC CGGCGGCCAG ATGAATGTGG TCGGCGGCGC
0301 ACCCTTCCTC CACACACACA GCATCAACAG CCAGCTGCCT ATTCACCCCG ATGTGCGGCT
0361 GAAAAAGCTA GCCTTCTACG ATGTACTCGG AACGCTAATT AAGCCTTCAA CTCTGGTGCC
0421 ACGCAACACT CAGCGCGTCC AAGAGGTGCC TTTCTACTTN CACGCTCACG CCGCAGCAGG
0481 CCACCGAGAT TGCCTCTAAT CG |
| in silico PCR Fragment |
0001 GTCGAGCTGC AAAAAATCCT GTCGTTTCTG AACATCTCAT TCGCTGGACG AAAAACTGAC
0061 CTGCAGAGCC GCATCCTCTC GTTCTTGCGC ACCAACTTGG AACTGCTTGC CCCGAAGGTC
0121 CAGGAAGTCT ACGCCCAGTC CGTGCAGGAA CAAA-ACGCC ACGCTGCAGT ACATCGACCC
0181 AACCAGGATG TACTCGCACA TCCAGCTGCC GCCCACCGTG CAGCCCAATC CCGTGGGCCT
0241 CGTGGGCAGC GGCCAAGGTG TGCAAGTGCC CGGCGGCCAG ATGAATGTGG TCGGCGGCGC
0301 ACCCTTCCTC CACACACACA GCATCAACAG CCAGCTGCCT ATTCACCCCG ATGTGCGGCT
0361 GAAAAAGCTA GCCTTCTACG ATGTACTCGG AACGCTAATT AAGCCTTCAA CTCTGGTGCC
0421 ACGCAACACT CAGCGCGTCC AAGAGGTGCC TTTCTACTT- CACGCTCACG CCGCAGCAGG
0481 CCACCGAGAT TGCCTCTAAT CG |
| Assemble Data |
8068R-1.IR_full 1 TCGAGCTGCAAAAAATCCTGTCGTTTCTGAACATCTCATTCGCTGGACGAAAAACTGAC 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
8068R-1.in silico 1 TCGAGCTGCAAAAAATCCTGTCGTTTCTGAACATCTCATTCGCTGGACGAAAAACTGAC 59
8068R-1.IR_full 61 CTGCAGAGCCGCATCCTCTCGTTCTTGCGCACCAACTTGGAACTGCTTGCCCCGAAGGTC 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
8068R-1.in silico 61 CTGCAGAGCCGCATCCTCTCGTTCTTGCGCACCAACTTGGAACTGCTTGCCCCGAAGGTC 119
8068R-1.IR_full 121 CAGGAAGTCTACGCCCAGTCCGTGCAGGAACAAANACGCCACGCTGCAGTACATCGACCC 179
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
8068R-1.in silico 121 CAGGAAGTCTACGCCCAGTCCGTGCAGGAACAAA-ACGCCACGCTGCAGTACATCGACCC 179
8068R-1.IR_full 181 AACCAGGATGTACTCGCACATCCAGCTGCCGCCCACCGTGCAGCCCAATCCCGTGGGCCT 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
8068R-1.in silico 181 AACCAGGATGTACTCGCACATCCAGCTGCCGCCCACCGTGCAGCCCAATCCCGTGGGCCT 239
8068R-1.IR_full 241 CGTGGGCAGCGGCCAAGGTGTGCAAGTGCCCGGCGGCCAGATGAATGTGGTCGGCGGCGC 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
8068R-1.in silico 241 CGTGGGCAGCGGCCAAGGTGTGCAAGTGCCCGGCGGCCAGATGAATGTGGTCGGCGGCGC 299
8068R-1.IR_full 301 ACCCTTCCTCCACACACACAGCATCAACAGCCAGCTGCCTATTCACCCCGATGTGCGGCT 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
8068R-1.in silico 301 ACCCTTCCTCCACACACACAGCATCAACAGCCAGCTGCCTATTCACCCCGATGTGCGGCT 359
8068R-1.IR_full 361 GAAAAAGCTAGCCTTCTACGATGTACTCGGAACGCTAATTAAGCCTTCAACTCTGGTGCC 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
8068R-1.in silico 361 GAAAAAGCTAGCCTTCTACGATGTACTCGGAACGCTAATTAAGCCTTCAACTCTGGTGCC 419
8068R-1.IR_full 421 ACGCAACACTCAGCGCGTCCAAGAGGTGCCTTTCTACTTNCACGCTCACGCCGCAGCAGG 479
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
8068R-1.in silico 421 ACGCAACACTCAGCGCGTCCAAGAGGTGCCTTTCTACTT-CACGCTCACGCCGCAGCAGG 479
8068R-1.IR_full 481 CCACCGAGATTGCCTCTAATCG 501
||||||||||||||||||||||
8068R-1.in silico 481 CCACCGAGATTGCCTCTAATCG 501
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| Off-target information (Last Update: November 4, 2007_NCBI RefSeq Release 26) |
Off-target search result
cv : coefficient of variation
(0 mm hits / total siRNA count)
mm : mismatch
|
| cv |
0mm |
1mm |
2mm |
3mm |
target transcript |
off target name |
| 100 |
482 |
0 |
0 |
0 |
NM_165645.1 |
CG8068-RI, transcript variant I (Su(var)2-10), mRNA |
| 100 |
482 |
0 |
0 |
0 |
NM_165647.1 |
CG8068-RH, transcript variant H (Su(var)2-10), mRNA |
| 100 |
482 |
0 |
0 |
0 |
NM_165646.1 |
CG8068-RD, transcript variant D (Su(var)2-10), mRNA |
| 100 |
482 |
0 |
0 |
0 |
NM_165648.1 |
CG8068-RG, transcript variant G (Su(var)2-10), mRNA |
| 100 |
482 |
0 |
0 |
0 |
NM_165650.1 |
CG8068-RF, transcript variant F (Su(var)2-10), mRNA |
| 100 |
482 |
0 |
0 |
0 |
NM_165649.1 |
CG8068-RC, transcript variant C (Su(var)2-10), mRNA |
| 100 |
482 |
0 |
0 |
0 |
NM_165651.1 |
CG8068-RB, transcript variant B (Su(var)2-10), mRNA |
| 100 |
482 |
0 |
0 |
0 |
NM_165652.1 |
CG8068-RE, transcript variant E (Su(var)2-10), mRNA |
| 100 |
482 |
0 |
0 |
0 |
NM_078940.2 |
CG8068-RA, transcript variant A (Su(var)2-10), mRNA |
| 0 |
0 |
1 |
8 |
3 |
NM_141998.1 |
CG11670-RA (CG11670), mRNA |
| 0 |
0 |
1 |
5 |
4 |
NM_001031911.1 |
CG33670-RA (CG33670), mRNA |
| 0 |
0 |
1 |
5 |
4 |
NM_001031910.1 |
CG11566-RA (CG11566), mRNA |
| 0 |
0 |
1 |
5 |
2 |
NM_170244.1 |
CG17370-RB, transcript variant B (CG17370), mRNA |
| 0 |
0 |
1 |
5 |
2 |
NM_143180.1 |
CG17370-RA, transcript variant A (CG17370), mRNA |
| 0 |
0 |
1 |
5 |
2 |
NM_170245.1 |
CG17370-RC, transcript variant C (CG17370), mRNA |
| 0 |
0 |
1 |
4 |
3 |
NM_176508.1 |
CG3962-RC, transcript variant C (Keap1), mRNA |
| 0 |
0 |
1 |
4 |
3 |
NM_142337.1 |
CG3962-RA, transcript variant A (Keap1), mRNA |
| 0 |
0 |
1 |
4 |
3 |
NM_169744.1 |
CG3962-RB, transcript variant B (Keap1), mRNA |
| 0 |
0 |
1 |
4 |
2 |
NM_079914.2 |
CG9936-RD, transcript variant D (skd), mRNA |
| 0 |
0 |
1 |
4 |
2 |
NM_168879.2 |
CG9936-RC, transcript variant C (skd), mRNA |
| 0 |
0 |
1 |
3 |
4 |
NM_001014754.1 |
CG33525-RC, transcript variant C (CG33525), mRNA |
| 0 |
0 |
1 |
3 |
4 |
NM_001014752.1 |
CG33525-RF, transcript variant F (CG33525), mRNA |
| 0 |
0 |
1 |
3 |
4 |
NM_001014753.1 |
CG33525-RE, transcript variant E (CG33525), mRNA |
| 0 |
0 |
1 |
3 |
4 |
NM_001014756.1 |
CG33525-RA, transcript variant A (CG33525), mRNA |
| 0 |
0 |
1 |
3 |
4 |
NM_001014755.1 |
CG33525-RD, transcript variant D (CG33525), mRNA |
| 0 |
0 |
1 |
3 |
3 |
NM_142092.2 |
CG14840-RA (CG14840), mRNA |
| 0 |
0 |
1 |
3 |
2 |
NM_137801.2 |
CG6203-RA, transcript variant A (Fmr1), mRNA |
| 0 |
0 |
1 |
3 |
2 |
NM_169324.1 |
CG6203-RC, transcript variant C (Fmr1), mRNA |
| 0 |
0 |
1 |
3 |
2 |
NM_169325.1 |
CG6203-RD, transcript variant D (Fmr1), mRNA |
| 0 |
0 |
1 |
3 |
2 |
NM_169326.1 |
CG6203-RE, transcript variant E (Fmr1), mRNA |
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