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NIG-RNAi Strains Detail
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Stock Detail (Last Update: November 2007_FlyBase version FB2007_11)
 Stock ID 7858R-1 
 Symbol Mocs1  Full Name Mocs1 
 CG No CG33048  Old CG No CG7858 
 Synonyms Mosc1A+Mosc1B, mocsI, CG7858, CG33048, Mocs1B, Mocs1A-B, Mocs1A, Mocs1 
 Accession No (Link to NCBI) NM_176317.1 
 Inserted Chr. lll 
 Insertional Mutation   
 Phenotype induced by Act5C-GAL4 at 28 degrees viable 
 Map Viewer
 Reference
[Please submit your publication] 		Ramin M, Li Y, Chang WT, Shaw H, Rao Y.
The peacefulness gene promotes aggression in Drosophila.
Mol Brain (2019) 12(1) 1 [ PubMed ID = 30606245 ] [ RRC reference ]

Tiwari P, Kumar A, Das RN, Malhotra V, VijayRaghavan K.
A Tendon Cell Specific RNAi Screen Reveals Novel Candidates Essential for Muscle Tendon Interaction.
PLoS One (2015) 10(10) e0140976 [ PubMed ID = 26488612 ] [ RRC reference ]  
 Comment  
 Sequence (Last Update: July 10, 2007_NCBI RefSeq Release 24)
 Primer Seq. 5' 
aaggcctacatggccggaccgTGGCTTCACTTTCGAGAGGAG 
 Primer Seq. 3' 
aatctagaggtaccAAAGCGATCCCTTTTCAGCGT 
 Predicted Fragment Size 
500 
 IR fragment full Seq 
0001 TGGCTTCACT TTCGAGAGGA GCAATCCGGC TGAAGGCCAC AACCGGTTAC CTCAATCTGG 
0061 CCACGGCAAG TGTTCAGCCA TTGGAGCCGG AGAAACAGGT GCTGAGAAAG AATTCGCCAC 
0121 TCACGGACTC CTTTGGCCGG CATCACACCT ATTTGAGAAT TTCTCTAACC GAACGCTGCA 
0181 ATCTGCGATG CGACTACTGC ATGCCCGCTG AAGGCGTTCC GCTACAGCCG AAAAACAAAC 
0241 TCCTGACCAC CGAGGAAATC CTTCGTCTAG CTCGAATTTT CGTGGAGCAG GGAGTGCGAA 
0301 AGATCCGCTT GACCGGCGGA GAGCCAACTG TGCGCAGGGA TATCGTGGAG ATTGTGGCAC 
0361 AAATGAAAGC ACTACCCGAA CTGGAGCAAG TCGGAATTAC CACCAATGGC CTGGTGCTGA 
0421 CCCGCCTGCT GTTGNCCGCT CCAGAGAGCT GGACTAGATA ACCTGAACAT CAGTCTGGAT 
0481 ACGCTGAAAA GGGATCGCTT T 
 in silico PCR Fragment 
0001 TGGCTTCACT TTCGAGAGGA GCAATCCGGC TGAAGGCCAC AACCGGTTAC CTCAATCTGG 
0061 CCACGGCAAG TGTTCAGCCA TTGGAGCCGG AGAAACAGGT GCTGAGAAAG AATTCGCCAC 
0121 TCACGGACTC CTTTGGCCGG CATCACACCT ATTTGAGAAT TTCTCTAACC GAACGCTGCA 
0181 ATCTGCGATG CGACTACTGC ATGCCCGCTG AAGGCGTTCC GCTACAGCCG AAAAACAAAC 
0241 TCCTGACCAC CGAGGAAATC CTTCGTCTAG CTCGAATTTT CGTGGAGCAG GGAGTGCGAA 
0301 AGATCCGCTT GACCGGCGGA GAGCCAACTG TGCGCAGGGA TATCGTAGAG ATAGTGGCAC 
0361 AAATGAAAGC ACTACCCGAA CTGGAGCAAA TCGGAATTAC CACCAATGGC CTGGTGCTGA 
0421 CACGCCTGCT GTTG-CCGCT CCAGAGAGCT GGACTAGATA ACCTGAACAT CAGTCTGGAT 
0481 ACGCTGAAAA GGGATCGCTT T 
 Assemble Data 

7858R-1.IR_full       1   TGGCTTCACTTTCGAGAGGAGCAATCCGGCTGAAGGCCACAACCGGTTACCTCAATCTGG 60
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
7858R-1.in silico     1   TGGCTTCACTTTCGAGAGGAGCAATCCGGCTGAAGGCCACAACCGGTTACCTCAATCTGG 60


7858R-1.IR_full       61  CCACGGCAAGTGTTCAGCCATTGGAGCCGGAGAAACAGGTGCTGAGAAAGAATTCGCCAC 120
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
7858R-1.in silico     61  CCACGGCAAGTGTTCAGCCATTGGAGCCGGAGAAACAGGTGCTGAGAAAGAATTCGCCAC 120


7858R-1.IR_full       121 TCACGGACTCCTTTGGCCGGCATCACACCTATTTGAGAATTTCTCTAACCGAACGCTGCA 180
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
7858R-1.in silico     121 TCACGGACTCCTTTGGCCGGCATCACACCTATTTGAGAATTTCTCTAACCGAACGCTGCA 180


7858R-1.IR_full       181 ATCTGCGATGCGACTACTGCATGCCCGCTGAAGGCGTTCCGCTACAGCCGAAAAACAAAC 240
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
7858R-1.in silico     181 ATCTGCGATGCGACTACTGCATGCCCGCTGAAGGCGTTCCGCTACAGCCGAAAAACAAAC 240


7858R-1.IR_full       241 TCCTGACCACCGAGGAAATCCTTCGTCTAGCTCGAATTTTCGTGGAGCAGGGAGTGCGAA 300
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
7858R-1.in silico     241 TCCTGACCACCGAGGAAATCCTTCGTCTAGCTCGAATTTTCGTGGAGCAGGGAGTGCGAA 300


7858R-1.IR_full       301 AGATCCGCTTGACCGGCGGAGAGCCAACTGTGCGCAGGGATATCGTGGAGATTGTGGCAC 360
                          |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||
7858R-1.in silico     301 AGATCCGCTTGACCGGCGGAGAGCCAACTGTGCGCAGGGATATCGTAGAGATAGTGGCAC 360


7858R-1.IR_full       361 AAATGAAAGCACTACCCGAACTGGAGCAAGTCGGAATTACCACCAATGGCCTGGTGCTGA 420
                          ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
7858R-1.in silico     361 AAATGAAAGCACTACCCGAACTGGAGCAAATCGGAATTACCACCAATGGCCTGGTGCTGA 420


7858R-1.IR_full       421 CCCGCCTGCTGTTGNCCGCTCCAGAGAGCTGGACTAGATAACCTGAACATCAGTCTGGAT 480
                          | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
7858R-1.in silico     421 CACGCCTGCTGTTG-CCGCTCCAGAGAGCTGGACTAGATAACCTGAACATCAGTCTGGAT 480


7858R-1.IR_full       481 ACGCTGAAAAGGGATCGCTTT 501
                          |||||||||||||||||||||
7858R-1.in silico     481 ACGCTGAAAAGGGATCGCTTT 501



 
 Off-target information (Last Update: November 4, 2007_NCBI RefSeq Release 26)
 Off-target search result

cv : coefficient of variation

(0 mm hits / total siRNA count)

mm : mismatch
cv 0mm 1mm 2mm 3mm target transcript off target name
100   482  0  0  0  NM_176317.1  CG33048-RA, transcript variant A (Mocs1), mRNA 
100   482  0  0  0  NM_176318.1  CG33048-RB, transcript variant B (Mocs1), mRNA 
100   482  0  0  0  NM_176316.1  CG33048-RC, transcript variant C (Mocs1), mRNA 
0   0  3  7  4  NM_206506.1  CG7467-RC, transcript variant C (osa), mRNA 
0   0  3  7  4  NM_079668.2  CG7467-RB, transcript variant B (osa), mRNA 
0   0  3  7  4  NM_169775.1  CG7467-RA, transcript variant A (osa), mRNA 
0   0  3  4  7  NM_078717.2  CG3696-RA, transcript variant A (kis), mRNA 
0   0  3  4  2  NM_164376.1  CG3696-RB, transcript variant B (kis), mRNA 
0   0  3  3  6  NM_167256.1  CG32669-RA (CG32669), mRNA 
0   0  2  6  3  NM_140685.4  CG3799-RA, transcript variant A (CG3799), mRNA 
0   0  2  6  3  NM_168706.1  CG3799-RC, transcript variant C (CG3799), mRNA 
0   0  2  6  3  NM_168705.1  CG3799-RB, transcript variant B (CG3799), mRNA 
0   0  2  5  2  NM_168066.1  CG1333-RA, transcript variant A (Ero1L), mRNA 
0   0  2  5  2  NM_139608.2  CG1333-RB, transcript variant B (Ero1L), mRNA 
0   0  1  2  2  NM_170552.1  CG1499-RB, transcript variant B (CG1499), mRNA 
0   0  1  2  2  NM_143614.1  CG1499-RA, transcript variant A (CG1499), mRNA 
0   0  1  2  2  NM_141578.1  CG8351-RA (CG8351), mRNA 
0   0  0  5  5  NM_139945.2  CG13671-RA (CG13671), mRNA 
0   0  0  5  4  NM_078846.2  CG4182-RA (yellow-c), mRNA 
0   0  0  5  4  NM_168461.2  CG11711-RA, transcript variant A (Mob1), mRNA 
0   0  0  5  2  NM_169616.2  CG4154-RA, transcript variant A (Gyc88E), mRNA 
0   0  0  4  9  NM_132120.1  CG14438-RA, transcript variant A (CG14438), mRNA 
0   0  0  4  9  NM_167090.1  CG14438-RB, transcript variant B (CG14438), mRNA 
0   0  0  4  5  NM_143012.1  CG5789-RA (CG5789), mRNA 
0   0  0  4  3  NM_079768.2  CG6238-RA, transcript variant A (ssh), mRNA 
0   0  0  4  3  NM_170184.1  CG6238-RB, transcript variant B (ssh), mRNA 
0   0  0  4  2  NM_132367.1  CG15252-RA (CG15252), mRNA 
0   0  0  3  10  NM_079368.2  CG7604-RA (Eig71Ee), mRNA 
0   0  0  3  8  NM_001014498.1  CG1832-RB, transcript variant B (CG1832), mRNA 
0   0  0  3  8  NM_136293.2  CG1832-RA, transcript variant A (CG1832), mRNA 

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