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NIG-RNAi Strains Detail
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Stock Detail (Last Update: November 2007_FlyBase version FB2007_11)
 Stock ID 7447R-1 
 Symbol CG7447  Full Name CG7447 
 CG No CG7447  Old CG No CG7447 
 Synonyms CT22877, CG7447 
 Accession No (Link to NCBI) NM_139641.2 
 Inserted Chr. ll 
 Insertional Mutation   
 Phenotype induced by Act5C-GAL4 at 28 degrees viable 
 Map Viewer
 Reference
[Please submit your publication] 		Zahoor MK, Poidevin M, Lecerf C, Garrido D, Montagne J.
A Drosophila genetic screen for suppressors of S6kinase-dependent growth identifies the F-box subunit Archipelago/FBXW7.
Mol Genet Genomics (2019) 294(3) 573-582 [ PubMed ID = 30656413 ] [ RRC reference ]  
 Comment  
 Sequence (Last Update: July 10, 2007_NCBI RefSeq Release 24)
 Primer Seq. 5' 
aaggcctacatggccggaccgTACTCGAGCTCTTTCCTGCTG 
 Primer Seq. 3' 
aatctagaggtaccACCGTTACCGATGGCACGAAT 
 Predicted Fragment Size 
500 
 IR fragment full Seq 
0001 TACTCGAGCT CTTTCCTGCT GCTCTGTTGC ACAATCCTGC TGCTGGGAAC AGTACAGAAT 
0061 GCCGGTTCCA ATAGCACCAG CCCTCATCCT CACCAGAATC AAACTCATCG CGGACATGGT 
0121 CACAGTCATC GAACGCGTCA TCAGGGCAAC TATTTGGCCA CCCATCAAAG GCAGCAGCGC 
0181 AGACTGCAGT CGCTGAATCA AGCCAAATCG GATGTGGAGC TGCTGCCCGG GGTCACCATG 
0241 CACGAGGTCA CCAGATTACG ACGGGTTCAG CCACATAATC CCTACAATAA AGTGCAGACA 
0301 CGACGCCTAC ACCAATCGCG AAACCCCACC GAATGGGATT ACAATACTTA CAACATCATG 
0361 ACCAACACGT TCGGTCCACC GCCACCGCCG ATGCCGTTGT CACCGCGATA TGGAAAGGGC 
0421 GAGGATAATA CCCAGGATGT TGAGTTTATC GGGGTGCGAG AACGTGGAAG GGGTTACTCA 
0481 TTCGTGCCAT CGGTAACGGT  
 in silico PCR Fragment 
0001 TACTCGAGCT CTTTCCTGCT GCTCTGTTGC ACAATCCTGC TGCTGGGAAC AGTACAGAAT 
0061 GCCGGTTCCA ATAGCACCAG CCCTCATCCT CACCAGAATC AAACTCATCG CGGACATGGT 
0121 CACAGTCATC GAACGCGTCA TCAGGGCAAC TATTTGGCCA CCCATCAAAG GCAGCAGCGC 
0181 AGACTGCAGT CGCTGAATCA AGCCAAATCG GATGTGGAGC TGCTGCCCGG GGTCACCATG 
0241 CACGAGGTCA CCAGATTACG ACGGGTTCAG CCACATAATC CCTACAATAA AGTGCAGACA 
0301 CGACGCCTAC ACCAATCGCG AAACCCCACC GAATGGGATT ACAATACTTA CAACATCATG 
0361 ACCAACACGT TCGGTCCACC GCCACCGCCG ATGCCGTTGT CACCGCGATA TGGAAAGGGC 
0421 GAGGATAATA CCCAGGATGT TGAGTTTATC GGGGTGCGAG AACGTGGAAG GGGTTACTCA 
0481 TTCGTGCCAT CGGTAACGGT  
 Assemble Data 

7447R-1.IR_full       1   TACTCGAGCTCTTTCCTGCTGCTCTGTTGCACAATCCTGCTGCTGGGAACAGTACAGAAT 60
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
7447R-1.in silico     1   TACTCGAGCTCTTTCCTGCTGCTCTGTTGCACAATCCTGCTGCTGGGAACAGTACAGAAT 60


7447R-1.IR_full       61  GCCGGTTCCAATAGCACCAGCCCTCATCCTCACCAGAATCAAACTCATCGCGGACATGGT 120
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
7447R-1.in silico     61  GCCGGTTCCAATAGCACCAGCCCTCATCCTCACCAGAATCAAACTCATCGCGGACATGGT 120


7447R-1.IR_full       121 CACAGTCATCGAACGCGTCATCAGGGCAACTATTTGGCCACCCATCAAAGGCAGCAGCGC 180
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
7447R-1.in silico     121 CACAGTCATCGAACGCGTCATCAGGGCAACTATTTGGCCACCCATCAAAGGCAGCAGCGC 180


7447R-1.IR_full       181 AGACTGCAGTCGCTGAATCAAGCCAAATCGGATGTGGAGCTGCTGCCCGGGGTCACCATG 240
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
7447R-1.in silico     181 AGACTGCAGTCGCTGAATCAAGCCAAATCGGATGTGGAGCTGCTGCCCGGGGTCACCATG 240


7447R-1.IR_full       241 CACGAGGTCACCAGATTACGACGGGTTCAGCCACATAATCCCTACAATAAAGTGCAGACA 300
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
7447R-1.in silico     241 CACGAGGTCACCAGATTACGACGGGTTCAGCCACATAATCCCTACAATAAAGTGCAGACA 300


7447R-1.IR_full       301 CGACGCCTACACCAATCGCGAAACCCCACCGAATGGGATTACAATACTTACAACATCATG 360
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
7447R-1.in silico     301 CGACGCCTACACCAATCGCGAAACCCCACCGAATGGGATTACAATACTTACAACATCATG 360


7447R-1.IR_full       361 ACCAACACGTTCGGTCCACCGCCACCGCCGATGCCGTTGTCACCGCGATATGGAAAGGGC 420
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
7447R-1.in silico     361 ACCAACACGTTCGGTCCACCGCCACCGCCGATGCCGTTGTCACCGCGATATGGAAAGGGC 420


7447R-1.IR_full       421 GAGGATAATACCCAGGATGTTGAGTTTATCGGGGTGCGAGAACGTGGAAGGGGTTACTCA 480
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
7447R-1.in silico     421 GAGGATAATACCCAGGATGTTGAGTTTATCGGGGTGCGAGAACGTGGAAGGGGTTACTCA 480


7447R-1.IR_full       481 TTCGTGCCATCGGTAACGGT 500
                          ||||||||||||||||||||
7447R-1.in silico     481 TTCGTGCCATCGGTAACGGT 500



 
 Off-target information (Last Update: November 4, 2007_NCBI RefSeq Release 26)
 Off-target search result

cv : coefficient of variation

(0 mm hits / total siRNA count)

mm : mismatch
cv 0mm 1mm 2mm 3mm target transcript off target name
100   482  0  0  0  NM_139641.2  CG7447-RA, transcript variant A (CG7447), mRNA 
100   482  0  0  0  NM_176283.1  CG7447-RB, transcript variant B (CG7447), mRNA 
0   0  5  4  2  NM_080368.2  CG9428-RA (ZIP1), mRNA 
0   0  3  3  3  NM_079048.2  CG4816-RB, transcript variant B (qkr54B), mRNA 
0   0  3  3  3  NM_166231.1  CG4816-RC, transcript variant C (qkr54B), mRNA 
0   0  3  3  3  NM_166230.1  CG4816-RA, transcript variant A (qkr54B), mRNA 
0   0  2  4  3  NM_138203.2  CG12189-RA (Rev1), mRNA 
0   0  2  3  4  NM_001038741.1  CG32776-RC, transcript variant C (CG32776), mRNA 
0   0  2  3  4  NM_166996.2  CG32776-RA, transcript variant A (CG32776), mRNA 
0   0  2  3  4  NM_206622.2  CG32776-RB, transcript variant B (CG32776), mRNA 
0   0  2  3  4  NM_001038740.1  CG32776-RD, transcript variant D (CG32776), mRNA 
0   0  1  8  8  NM_167330.2  CG17762-RD, transcript variant D (tomosyn), mRNA 
0   0  1  6  7  NM_176247.1  CG33143-RB, transcript variant B (CG33143), mRNA 
0   0  1  5  6  NM_132591.3  CG17762-RB, transcript variant B (tomosyn), mRNA 
0   0  1  5  6  NM_167328.2  CG17762-RA, transcript variant A (tomosyn), mRNA 
0   0  1  5  6  NM_167329.2  CG17762-RC, transcript variant C (tomosyn), mRNA 
0   0  1  4  2  NM_057379.2  CG8355-RC, transcript variant C (sli), mRNA 
0   0  1  4  2  NM_057381.2  CG8355-RB, transcript variant B (sli), mRNA 
0   0  1  4  2  NM_057380.2  CG8355-RA, transcript variant A (sli), mRNA 
0   0  1  4  2  NM_136093.2  CG10492-RA (CG10492), mRNA 
0   0  1  2  6  NM_130587.1  CG14799-RA (CG14799), mRNA 
0   0  1  2  5  NM_058149.3  CG3352-RA (ft), mRNA 
0   0  1  2  3  NM_137339.2  CG9646-RA (CG9646), mRNA 
0   0  1  2  3  NM_142819.1  CG6954-RA (CG6954), mRNA 
0   0  1  2  3  NM_079320.2  CG10620-RA (Tsf2), mRNA 
0   0  1  2  2  NM_132025.2  CG3125-RA, transcript variant A (l(1)G0060), mRNA 
0   0  1  2  2  NM_167047.1  CG3125-RB, transcript variant B (l(1)G0060), mRNA 
0   0  1  2  2  NM_140358.1  CG10748-RA (CG10748), mRNA 
0   0  0  8  10  NM_135595.2  CG17108-RA (CG17108), mRNA 
0   0  0  5  12  NM_078797.2  CG13109-RA (tai), mRNA 

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