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NIG-RNAi Strains Detail |
Request : Click the "Order" button to request for this stock |
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Stock Detail (Last Update: November 2007_FlyBase version FB2007_11) |
Stock ID |
7055R-3 |
Symbol |
dalao |
Full Name |
dalao |
CG No |
CG7055 |
Old CG No |
CG7055 |
Synonyms |
BAP111, BAF57, CG7055, Bap111, unnamed, clone 1.83, anon-EST:Liang-1.83, dalao |
Accession No (Link to NCBI) |
NM_132302.3 |
Inserted Chr. |
lll |
Insertional Mutation |
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Phenotype induced by Act5C-GAL4 at 28 degrees |
lethal |
Map Viewer |
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Reference
[Please submit your publication]
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Liu Y, Ge Q, Chan B, Liu H, Singh SR, Manley J, Lee J, Weideman AM, Hou G, Hou SX. Whole-animal genome-wide RNAi screen identifies networks regulating male germline stem cells in Drosophila. Nat Commun (2016) 7 12149
[
PubMed ID = 27484291
]
[
RRC reference
]
Tiwari P, Kumar A, Das RN, Malhotra V, VijayRaghavan K. A Tendon Cell Specific RNAi Screen Reveals Novel Candidates Essential for Muscle Tendon Interaction. PLoS One (2015) 10(10) e0140976
[
PubMed ID = 26488612
]
[
RRC reference
]
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Comment |
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Sequence (Last Update: July 10, 2007_NCBI RefSeq Release 24) |
Primer Seq. 5' |
aaggcctacatggccggaccgCCCTGCCAAGCAACTACAAGC |
Primer Seq. 3' |
aatctagaggtaccGGCCGACATGTAGGCCTGATA |
Predicted Fragment Size |
500 |
IR fragment full Seq |
0001 CCCTNGCCAA GCAACTACAA GCAGATaGCC GTTGGCGGCC AGGGATCGGC CACACCACTC
0061 NAGGGCGGCG GCGGTCNGCT CNGGCGGCGG CAGCCGNTCN CGTTCATCCG NCGGCGNNGG
0121 TGNTGGCGAT CGCAACAAGG ATCAGACGCC CATCTTCACG CACAGCAACT ATGGGAATCC
0181 GGCATTCACG CCACAGAAGG TGACCAAGTC GTCGAGCAGC AAGAACCAGA ACGAATCAAG
0241 GCTACCCAAG CCACCAAAGC CGCCGGAGAA GCCCATTTTG CCCTACATGC GGTATTCGAA
0301 ACGCGTCTGG GATAGCGTCA AGGCGAAGCA TCCAGAGCTG AAGCTGTGGG AGCTGGGTAA
0361 GAAGATCGGT GCCATGTGGA AGTTGCTGCC CGAGGATGAG AAGACGGAGT TCATTGACGA
0421 ATACGAGGCG GAGAAGCTGG AGTACGAGAA ATCGCTAAAG GCCTACCACC AGACGCCCgC
0481 CTATCAGGCC TANATNTNGG CC |
in silico PCR Fragment |
0001 CCCT-GCCAA GCAACTACAA GCAGATAGCC GTTGGCGGCC AGGGATCGGC CACACCACTC
0061 CAGGGCGGCG GCGGT-GGCT CCGGCGGCGG CAGCCGGTCG CGTTCATCCG GCGGCGGAGG
0121 TGGTGGCGAT CGCAACAAGG ATCAGACGCC CATCTTCACG CACAGCAACT ATGGGAATCC
0181 GGCATTCACG CCACAGAAGG TAACCAAGTC GTCGAGCAGC AAGAACCAGA ACGAATCAAG
0241 GCTACCCAAG CCACCAAAGC CGCCGGAGAA GCCCATTTTG CCCTACATGC GGTATTCGAA
0301 ACGCGTCTGG GATAGCGTCA AGGCGAAGCA TCCAGAGCTG AAGCTGTGGG AGCTGGGTAA
0361 GAAGATCGGT GCCATGTGGA AGTTGCTGCC CGAGGATGAG AAGACGGAGT TCATTGACGA
0421 ATACGAGGCG GAGAAGCTGG AGTACGAGAA ATCGCTAAAG GCCTACCACC AGACGCCCGC
0481 CTATCAGGCC TACATGTCGG CC |
Assemble Data |
7055R-3.IR_full 1 CCCTNGCCAAGCAACTACAAGCAGATAGCCGTTGGCGGCCAGGGATCGGCCACACCACTC 60
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7055R-3.in silico 1 CCCT-GCCAAGCAACTACAAGCAGATAGCCGTTGGCGGCCAGGGATCGGCCACACCACTC 60
7055R-3.IR_full 61 AGGGCGGCGGCGGTCNGCTCNGGCGGCGGCAGCCGNTCNCGTTCATCCGNCGGCGNNGG 119
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7055R-3.in silico 61 AGGGCGGCGGCGGT-GGCTCCGGCGGCGGCAGCCGGTCGCGTTCATCCGGCGGCGGAGG 119
7055R-3.IR_full 121 TGNTGGCGATCGCAACAAGGATCAGACGCCCATCTTCACGCACAGCAACTATGGGAATCC 179
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7055R-3.in silico 121 TGGTGGCGATCGCAACAAGGATCAGACGCCCATCTTCACGCACAGCAACTATGGGAATCC 179
7055R-3.IR_full 181 GGCATTCACGCCACAGAAGGTGACCAAGTCGTCGAGCAGCAAGAACCAGAACGAATCAAG 239
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7055R-3.in silico 181 GGCATTCACGCCACAGAAGGTAACCAAGTCGTCGAGCAGCAAGAACCAGAACGAATCAAG 239
7055R-3.IR_full 241 GCTACCCAAGCCACCAAAGCCGCCGGAGAAGCCCATTTTGCCCTACATGCGGTATTCGAA 299
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7055R-3.in silico 241 GCTACCCAAGCCACCAAAGCCGCCGGAGAAGCCCATTTTGCCCTACATGCGGTATTCGAA 299
7055R-3.IR_full 301 ACGCGTCTGGGATAGCGTCAAGGCGAAGCATCCAGAGCTGAAGCTGTGGGAGCTGGGTAA 359
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7055R-3.in silico 301 ACGCGTCTGGGATAGCGTCAAGGCGAAGCATCCAGAGCTGAAGCTGTGGGAGCTGGGTAA 359
7055R-3.IR_full 361 GAAGATCGGTGCCATGTGGAAGTTGCTGCCCGAGGATGAGAAGACGGAGTTCATTGACGA 419
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7055R-3.in silico 361 GAAGATCGGTGCCATGTGGAAGTTGCTGCCCGAGGATGAGAAGACGGAGTTCATTGACGA 419
7055R-3.IR_full 421 ATACGAGGCGGAGAAGCTGGAGTACGAGAAATCGCTAAAGGCCTACCACCAGACGCCCGC 479
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7055R-3.in silico 421 ATACGAGGCGGAGAAGCTGGAGTACGAGAAATCGCTAAAGGCCTACCACCAGACGCCCGC 479
7055R-3.IR_full 481 CTATCAGGCCTANATNTNGGCC 501
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7055R-3.in silico 481 CTATCAGGCCTACATGTCGGCC 501
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Off-target information (Last Update: November 4, 2007_NCBI RefSeq Release 26) |
Off-target search result
cv : coefficient of variation
(0 mm hits / total siRNA count)
mm : mismatch
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cv |
0mm |
1mm |
2mm |
3mm |
target transcript |
off target name |
100 |
482 |
0 |
0 |
13 |
NM_132302.3 |
CG7055-RA (dalao), mRNA |
0.41 |
2 |
3 |
3 |
15 |
NM_140925.2 |
CG7323-RA (CG7323), mRNA |
0.41 |
2 |
2 |
2 |
8 |
NM_132535.2 |
CG1844-RA (SelG), mRNA |
0.2 |
1 |
2 |
4 |
11 |
NM_140917.1 |
CG14186-RA (CG14186), mRNA |
0.2 |
1 |
2 |
2 |
9 |
NM_057829.3 |
CG8075-RA (Vang), mRNA |
0.2 |
1 |
2 |
2 |
8 |
NM_142397.1 |
CG14318-RA (CG14318), mRNA |
0 |
0 |
9 |
26 |
69 |
NM_143742.2 |
CG5812-RA (GCR(ich)), mRNA |
0 |
0 |
5 |
2 |
5 |
NM_168575.1 |
CG32138-RA, transcript variant A (CG32138), mRNA |
0 |
0 |
5 |
2 |
5 |
NM_168576.1 |
CG32138-RB, transcript variant B (CG32138), mRNA |
0 |
0 |
4 |
31 |
67 |
NM_078641.2 |
CG3606-RB, transcript variant B (caz), mRNA |
0 |
0 |
4 |
31 |
67 |
NM_167493.1 |
CG3606-RA, transcript variant A (caz), mRNA |
0 |
0 |
4 |
6 |
13 |
NM_167581.2 |
CG7826-RA, transcript variant A (mnb), mRNA |
0 |
0 |
4 |
5 |
4 |
NM_168382.1 |
CG6721-RB, transcript variant B (Gap1), mRNA |
0 |
0 |
4 |
5 |
4 |
NM_079290.2 |
CG6721-RA, transcript variant A (Gap1), mRNA |
0 |
0 |
4 |
4 |
2 |
NM_057632.3 |
CG10072-RA (sgl), mRNA |
0 |
0 |
3 |
6 |
4 |
NM_080124.3 |
CG31695-RA (scw), mRNA |
0 |
0 |
3 |
4 |
9 |
NM_140776.2 |
CG13699-RA (CG13699), mRNA |
0 |
0 |
3 |
2 |
5 |
NM_135288.2 |
CG18585-RA (CG18585), mRNA |
0 |
0 |
3 |
2 |
5 |
NM_169381.1 |
CG17184-RB, transcript variant B (CG17184), mRNA |
0 |
0 |
3 |
2 |
5 |
NM_141801.1 |
CG17184-RA, transcript variant A (CG17184), mRNA |
0 |
0 |
2 |
73 |
171 |
NM_168226.1 |
CG32377-RA (CG32377), mRNA |
0 |
0 |
2 |
7 |
19 |
NM_133014.2 |
CG6269-RA (unc-4), mRNA |
0 |
0 |
2 |
7 |
18 |
NM_135957.2 |
CG31738-RB, transcript variant B (CG31738), mRNA |
0 |
0 |
2 |
7 |
14 |
NM_057516.3 |
CG5403-RA, transcript variant A (retn), mRNA |
0 |
0 |
2 |
7 |
14 |
NM_176254.1 |
CG5403-RB, transcript variant B (retn), mRNA |
0 |
0 |
2 |
6 |
18 |
NM_136634.2 |
CG1975-RA (Rep2), mRNA |
0 |
0 |
2 |
6 |
15 |
NM_206362.1 |
CG9425-RB, transcript variant B (CG9425), mRNA |
0 |
0 |
2 |
6 |
15 |
NM_140468.2 |
CG9425-RA, transcript variant A (CG9425), mRNA |
0 |
0 |
2 |
6 |
8 |
NM_170420.1 |
CG18741-RA, transcript variant A (DopR2), mRNA |
0 |
0 |
2 |
6 |
8 |
NM_079824.2 |
CG18741-RB, transcript variant B (DopR2), mRNA |
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