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Notice:
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Suspension of shipments during Golden Week Holidays: From 30 April to 14 May, deadline 17 April.
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| NIG-RNAi Strains Detail |
| Request : Click the "Order" button to request for this stock |
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| Stock Detail (Last Update: November 2007_FlyBase version FB2007_11) |
| Stock ID |
5610R-1 |
| Symbol |
nAcRalpha-96Aa |
Full Name |
nicotinic Acetylcholine Receptor alpha 96Aa |
| CG No |
CG5610 |
Old CG No |
CG5610 |
| Synonyms |
nAChR, ALS, nAcr96Aa, nAcRs, Acr96Aa, als, alpha1, alpha-like, ALs, CG5610, AcrB, Acr96A, nAcRalpha-96Aa, dALS |
| Accession No (Link to NCBI) |
NM_079757.3 |
| Inserted Chr. |
ll |
| Insertional Mutation |
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| Phenotype induced by Act5C-GAL4 at 28 degrees |
viable |
| Map Viewer |
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Reference
[Please submit your publication]
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Dourlen P, Fernandez-Gomez FJ, Dupont C, Grenier-Boley B, Bellenguez C, Obriot H, Caillierez R, Sottejeau Y, Chapuis J, Bretteville A, Abdelfettah F, Delay C, Malmanche N, Soininen H, Hiltunen M, Galas MC, Amouyel P, Sergeant N, Buée L, Lambert JC, Dermaut B.
Functional screening of Alzheimer risk loci identifies PTK2B as an in vivo modulator and early marker of Tau pathology.
Mol Psychiatry (2017) 22(6) 874-883
[
PubMed ID = 27113998
]
[
RRC reference
]
Lesch C, Jo J, Wu Y, Fish GS, Galko MJ.
A targeted UAS-RNAi screen in Drosophila larvae identifies wound closure genes regulating distinct cellular processes.
Genetics (2010) 186(3) 943-57
[
PubMed ID = 20813879
]
[
RRC reference
]
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| Comment |
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| Sequence (Last Update: July 10, 2007_NCBI RefSeq Release 24) |
| Primer Seq. 5' |
aaggcctacatggccggaccgCTCCCAGCTGATCGATGTGAA |
| Primer Seq. 3' |
aatctagaggtaccCCTCGCAGCAGCTGTAGAACT |
| Predicted Fragment Size |
500 |
| IR fragment full Seq |
0001 CTCCCAGCTG ATCGATGTGA ATCTAAAGAA TCAAATTATG ACAACCAATG TCTGGGTGGA
0061 ACAGGAATGG AACGACTATA AATTGAAATG GAATCCGGAT GACTATGGCG GCGTGGACAC
0121 TTTGCACGTT CCCTCCGAGC ATATATGGCT ACCGGATATT GTGCTCTATA ACAACGCCGA
0181 TGGCAACTAT GAAGTGACAA TAATGACAAA AGCAATTCTT CATCACACGG GCAAAGTGGT
0241 GTGGAAACCG CCCGCCATTT ACAAATCCTT CTGCGAAATT GATGTCGAGT ACTTTCCCTT
0301 CGACGAGCAG ACATGTTTCA TGAAGTTCGG ATCCTGGACC TACGATGGTT ACATGGTGGA
0361 CTTGAGGCAC TTGAAGCAGA CCGCCGATTC GGACAACATC GAGGTGGGCA TCGACCTGCA
0421 GGACTACTAC ATCTCCGTGG AGTGGGACAT CATGCGTGTG CCGGCGGTGC GGNAACGAGA
0481 AGTTCTACAG CTGCTGCGAG G |
| in silico PCR Fragment |
0001 CTCCCAGCTG ATCGATGTGA ATCTAAAGAA TCAAATTATG ACAACCAATG TCTGGGTGGA
0061 ACAGGAATGG AACGACTATA AATTGAAATG GAATCCGGAT GACTATGGCG GCGTGGACAC
0121 TTTGCACGTT CCCTCCGAGC ATATATGGCT ACCGGATATT GTGCTCTATA ACAACGCCGA
0181 TGGCAACTAT GAAGTGACAA TAATGACAAA AGCAATTCTT CATCACACGG GCAAAGTGGT
0241 GTGGAAACCG CCCGCCATTT ACAAATCCTT CTGCGAAATT GATGTCGAGT ACTTTCCCTT
0301 CGACGAGCAG ACATGTTTCA TGAAGTTCGG ATCCTGGACC TACGATGGTT ACATGGTGGA
0361 CTTGAGGCAC TTGAAGCAGA CCGCCGACTC GGACAACATC GAGGTGGGCA TCGACCTGCA
0421 GGACTACTAC ATCTCCGTGG AGTGGGACAT CATGCGTGTG CCGGCGGTGC GG-AACGAGA
0481 AGTTCTACAG CTGCTGCGAG G |
| Assemble Data |
5610R-1.IR_full 1 CTCCCAGCTGATCGATGTGAATCTAAAGAATCAAATTATGACAACCAATGTCTGGGTGGA 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
5610R-1.in silico 1 CTCCCAGCTGATCGATGTGAATCTAAAGAATCAAATTATGACAACCAATGTCTGGGTGGA 60
5610R-1.IR_full 61 ACAGGAATGGAACGACTATAAATTGAAATGGAATCCGGATGACTATGGCGGCGTGGACAC 120
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5610R-1.in silico 61 ACAGGAATGGAACGACTATAAATTGAAATGGAATCCGGATGACTATGGCGGCGTGGACAC 120
5610R-1.IR_full 121 TTTGCACGTTCCCTCCGAGCATATATGGCTACCGGATATTGTGCTCTATAACAACGCCGA 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
5610R-1.in silico 121 TTTGCACGTTCCCTCCGAGCATATATGGCTACCGGATATTGTGCTCTATAACAACGCCGA 180
5610R-1.IR_full 181 TGGCAACTATGAAGTGACAATAATGACAAAAGCAATTCTTCATCACACGGGCAAAGTGGT 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
5610R-1.in silico 181 TGGCAACTATGAAGTGACAATAATGACAAAAGCAATTCTTCATCACACGGGCAAAGTGGT 240
5610R-1.IR_full 241 GTGGAAACCGCCCGCCATTTACAAATCCTTCTGCGAAATTGATGTCGAGTACTTTCCCTT 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
5610R-1.in silico 241 GTGGAAACCGCCCGCCATTTACAAATCCTTCTGCGAAATTGATGTCGAGTACTTTCCCTT 300
5610R-1.IR_full 301 CGACGAGCAGACATGTTTCATGAAGTTCGGATCCTGGACCTACGATGGTTACATGGTGGA 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
5610R-1.in silico 301 CGACGAGCAGACATGTTTCATGAAGTTCGGATCCTGGACCTACGATGGTTACATGGTGGA 360
5610R-1.IR_full 361 CTTGAGGCACTTGAAGCAGACCGCCGATTCGGACAACATCGAGGTGGGCATCGACCTGCA 420
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
5610R-1.in silico 361 CTTGAGGCACTTGAAGCAGACCGCCGACTCGGACAACATCGAGGTGGGCATCGACCTGCA 420
5610R-1.IR_full 421 GGACTACTACATCTCCGTGGAGTGGGACATCATGCGTGTGCCGGCGGTGCGGNAACGAGA 480
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5610R-1.in silico 421 GGACTACTACATCTCCGTGGAGTGGGACATCATGCGTGTGCCGGCGGTGCGG-AACGAGA 480
5610R-1.IR_full 481 AGTTCTACAGCTGCTGCGAGG 501
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5610R-1.in silico 481 AGTTCTACAGCTGCTGCGAGG 501
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| Off-target information (Last Update: November 4, 2007_NCBI RefSeq Release 26) |
Off-target search result
cv : coefficient of variation
(0 mm hits / total siRNA count)
mm : mismatch
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