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NIG-RNAi Strains Detail
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Stock Detail (Last Update: November 2007_FlyBase version FB2007_11)
 Stock ID 3539R-3 
 Symbol Slh  Full Name SLY-1 homologous 
 CG No CG3539  Old CG No CG3539 
 Synonyms Sly1, slh, CG3539, Sly1p, d-sly, Slh 
 Accession No (Link to NCBI)  
 Inserted Chr. lll 
 Insertional Mutation  lethal 
 Phenotype induced by Act5C-GAL4 at 28 degrees  
 Map Viewer
 Reference
[Please submit your publication]
Ohhara Y, Nakamura A, Kato Y, Yamakawa-Kobayashi K.
Chaperonin TRiC/CCT supports mitotic exit and entry into endocycle in Drosophila.
PLoS Genet (2019) 15(4) e1008121 [ PubMed ID = 31034473 ] [ RRC reference ]  
 Comment  
 Sequence (Last Update: July 10, 2007_NCBI RefSeq Release 24)
 Primer Seq. 5'
aaggcctacatggccggaccgAGCCCGTGTGGAAGATCCTTA 
 Primer Seq. 3'
aatctagaggtaccATTGCCCAGGGTCACAAACAG 
 Predicted Fragment Size
500 
 IR fragment full Seq
 
 in silico PCR Fragment
 
 Assemble Data

3539R-3.IR full       1   AGCCCGTGTGGAAGATCCTTATCTACGATCGCGTTGGCCAGGACATCATATCGCCCATTA 60
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
3539R-3.in silico     1   AGCCCGTGTGGAAGATCCTTATCTACGATCGCGTTGGCCAGGACATCATATCGCCCATTA 60


3539R-3.IR full       61  TTTCCATCAAGGAGCTGCGCGAGTTGGGCGTGACCCTGCATGTGCAACTGCACTCGGATC 120
                          |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
3539R-3.in silico     61  TTTCCATCAAGGAGCTGCGCGAGTTGGGCGTGACGCTGCATGTGCAACTGCACTCGGATC 120


3539R-3.IR full       121 GGGACTCCATTCCGGATGTGCCGGCTATATACTTCTGCCTGCCCACCGACGAGAATTTGG 180
                          | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
3539R-3.in silico     121 GCGACTCCATTCCGGATGTGCCGGCTATATACTTCTGCCTGCCCACCGACGAGAATTTGG 180


3539R-3.IR full       181 ACAGGATTCAGCAGGACTTCTCGAACGGACTGTACGACGTGTACCACCTGAACTTCCTAG 240
                          |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
3539R-3.in silico     181 ACAGGATTCAGCAGGACTTCTCGAGCGGACTGTACGACGTGTACCACCTGAACTTCCTAG 240


3539R-3.IR full       241 CTCCCATAACGCGCAGCAAAATCGAGAATCTGGCCGCCGCAGCCCTGCATGCCGGCTGCG 300
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
3539R-3.in silico     241 CTCCCATAACGCGCAGCAAAATCGAGAATCTGGCCGCCGCAGCCCTGCATGCCGGCTGCG 300


3539R-3.IR full       301 TGGCCAACATCCATCGCGTTTACGACCAGTATGTGAACTTCATCAGTCTGGAGGATGACT 360
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
3539R-3.in silico     301 TGGCCAACATCCATCGCGTTTACGACCAGTATGTGAACTTCATCAGTCTGGAGGATGACT 360


3539R-3.IR full       361 TCTTCATCCTAAAGCACCAGCAGAGCGATCAGCTTTCATACTACGCCATCAACCGGGCCA 420
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
3539R-3.in silico     361 TCTTCATCCTAAAGCACCAGCAGAGCGATCAGCTTTCATACTACGCCATCAACCGGGCCA 420


3539R-3.IR full       421 ACACCCGCGATGAAGAGATGGAGGCCCTGATGGACTCCATTGTAGACTCGCTCTTCGCCC 480
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
3539R-3.in silico     421 ACACCCGCGATGAAGAGATGGAGGCCCTGATGGACTCCATTGTAGACTCGCTCTTCGCCC 480


3539R-3.IR full       481 TGTTTGTGACCCTGGGCAAT 500
                          ||||||||||||||||||||
3539R-3.in silico     481 TGTTTGTGACCCTGGGCAAT 500

 
 Off-target information (Last Update: November 4, 2007_NCBI RefSeq Release 26)
 Off-target search result

cv : coefficient of variation

(0 mm hits / total siRNA count)

mm : mismatch
 

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