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Notice:
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Suspension of shipments during Golden Week Holidays: From 30 April to 14 May, deadline 17 April.
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| NIG-RNAi Strains Detail |
| Request : Click the "Order" button to request for this stock |
discarded
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| Stock Detail (Last Update: November 2007_FlyBase version FB2007_11) |
| Stock ID |
2937R-1 |
| Symbol |
mRpS2 |
Full Name |
mitochondrial ribosomal protein S2 |
| CG No |
CG2937 |
Old CG No |
CG2937 |
| Synonyms |
CG2937, MRP-S2, mRpS2 |
| Accession No (Link to NCBI) |
NM_078749.3 |
| Inserted Chr. |
ll |
| Insertional Mutation |
|
| Phenotype induced by Act5C-GAL4 at 28 degrees |
lethal |
| Map Viewer |
|
Reference
[Please submit your publication]
|
Mo D, Liu C, Chen Y, Cheng X, Shen J, Zhao L, Zhang J.
The mitochondrial ribosomal protein mRpL4 regulates Notch signaling.
EMBO Rep (2023) e55764
[
PubMed ID = 37009823
]
[
RRC reference
]
Tiwari P, Kumar A, Das RN, Malhotra V, VijayRaghavan K.
A Tendon Cell Specific RNAi Screen Reveals Novel Candidates Essential for Muscle Tendon Interaction.
PLoS One (2015) 10(10) e0140976
[
PubMed ID = 26488612
]
[
RRC reference
]
Umemori M, Habara O, Iwata T, Maeda K, Nishinoue K, Okabe A, Takemura M, Takahashi K, Saigo K, Ueda R, Adachi-Yamada T.
RNAi-mediated knockdown showing impaired cell survival in Drosophila wing imaginal disc.
Gene Regul Syst Bio (2009) 3 11-20
[
PubMed ID = 19838331
]
[
RRC reference
]
|
| Comment |
|
| Sequence (Last Update: July 10, 2007_NCBI RefSeq Release 24) |
| Primer Seq. 5' |
aaggcctacatggccggaccgCAGGAGGCCGGTGAATTCTCG |
| Primer Seq. 3' |
aatctagaggtaccGGATTCGTCCAGAGGCGGAAG |
| Predicted Fragment Size |
351 |
| IR fragment full Seq |
0001 CAGGNAGGCC GGTGAATTCT CGCACACTCG CTTTTGGCGC GGCGGCATCT TTACCAATGC
0061 CAATGTGCAA TTCGATGCGG TCACCAGGCT GCCCGATCTT TGCATTTTCC TCAACACTCA
0121 AAACAACGTT ATGGCTCANG CACACGGCGG TNTCGGGACG CCgCCAAAAT GGCCATACCA
0181 ACGATTGGCA TAGTGGACAG CAATTGCAAT CCCAACCTGA TCACCTATCC GGTGCCCGGC
0241 AACGATGACT CGCCGGCCGC AGTGGAGCTC TATTGCAACC TCTTCAAGGA AGCCATACTG
0301 CGTGGCAAGC GGGAACGACG CCAACTCCTT GGCCTTCCGC CTCTGGACGA ATCC |
| in silico PCR Fragment |
0001 CAGG-AGGCC GGTGAATTCT CGCACACTCG CTTTTGGCGC GGCGGCATCT TTACCAATGC
0061 CAATGTGCAA TTCGATGCGG TCACCAGGCT GCCCGATCTT TGCATTTTCC TCAACACTCA
0121 AAACAACGTT ATGGCTCA-G CACACGGCGG T-TCGGGACG CCGCCAAAAT GGCCATACCA
0181 ACGATTGGCA TAGTGGACAG CAATTGCAAT CCCAACCTGA TCACCTATCC GGTGCCCGGC
0241 AACGATGACT CGCCGGCCGC AGTGGAGCTC TATTGCAACC TCTTCAAGGA AGCCATACTG
0301 CGTGGCAAGC GGGAACGACG CCAACTCCTT GGCCTTCCGC CTCTGGACGA ATCC |
| Assemble Data |
2937R-1.IR_full 1 CAGGNAGGCCGGTGAATTCTCGCACACTCGCTTTTGGCGCGGCGGCATCTTTACCAATGC 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
2937R-1.in silico 1 CAGG-AGGCCGGTGAATTCTCGCACACTCGCTTTTGGCGCGGCGGCATCTTTACCAATGC 60
2937R-1.IR_full 61 CAATGTGCAATTCGATGCGGTCACCAGGCTGCCCGATCTTTGCATTTTCCTCAACACTCA 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
2937R-1.in silico 61 CAATGTGCAATTCGATGCGGTCACCAGGCTGCCCGATCTTTGCATTTTCCTCAACACTCA 120
2937R-1.IR_full 121 AAACAACGTTATGGCTCANGCACACGGCGGTNTCGGGACGCCGCCAAAATGGCCATACCA 180
|||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||
2937R-1.in silico 121 AAACAACGTTATGGCTCA-GCACACGGCGGT-TCGGGACGCCGCCAAAATGGCCATACCA 180
2937R-1.IR_full 181 ACGATTGGCATAGTGGACAGCAATTGCAATCCCAACCTGATCACCTATCCGGTGCCCGGC 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
2937R-1.in silico 181 ACGATTGGCATAGTGGACAGCAATTGCAATCCCAACCTGATCACCTATCCGGTGCCCGGC 240
2937R-1.IR_full 241 AACGATGACTCGCCGGCCGCAGTGGAGCTCTATTGCAACCTCTTCAAGGAAGCCATACTG 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
2937R-1.in silico 241 AACGATGACTCGCCGGCCGCAGTGGAGCTCTATTGCAACCTCTTCAAGGAAGCCATACTG 300
2937R-1.IR_full 301 CGTGGCAAGCGGGAACGACGCCAACTCCTTGGCCTTCCGCCTCTGGACGAATCC 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||
2937R-1.in silico 301 CGTGGCAAGCGGGAACGACGCCAACTCCTTGGCCTTCCGCCTCTGGACGAATCC 354
|
| Off-target information (Last Update: November 4, 2007_NCBI RefSeq Release 26) |
Off-target search result
cv : coefficient of variation
(0 mm hits / total siRNA count)
mm : mismatch
|
| cv |
0mm |
1mm |
2mm |
3mm |
target transcript |
off target name |
| 100 |
333 |
0 |
0 |
0 |
NM_078749.3 |
CG2937-RA (mRpS2), mRNA |
| 0 |
0 |
2 |
2 |
5 |
NM_206026.1 |
CG9403-RC, transcript variant C (jing), mRNA |
| 0 |
0 |
2 |
2 |
5 |
NM_206027.1 |
CG9403-RD, transcript variant D (jing), mRNA |
| 0 |
0 |
2 |
2 |
5 |
NM_136371.2 |
CG9403-RA, transcript variant A (jing), mRNA |
| 0 |
0 |
2 |
2 |
3 |
NM_057550.3 |
CG10118-RB, transcript variant B (ple), mRNA |
| 0 |
0 |
2 |
2 |
3 |
NM_057549.2 |
CG10118-RA, transcript variant A (ple), mRNA |
| 0 |
0 |
2 |
2 |
2 |
NM_137026.1 |
CG17049-RA (CG17049), mRNA |
| 0 |
0 |
1 |
4 |
4 |
NM_176102.1 |
CG30492-RD, transcript variant D (CG30492), mRNA |
| 0 |
0 |
1 |
4 |
4 |
NM_170614.2 |
CG30492-RB, transcript variant B (CG30492), mRNA |
| 0 |
0 |
1 |
4 |
4 |
NM_176100.1 |
CG30492-RC, transcript variant C (CG30492), mRNA |
| 0 |
0 |
1 |
4 |
4 |
NM_170613.2 |
CG30492-RA, transcript variant A (CG30492), mRNA |
| 0 |
0 |
1 |
4 |
4 |
NM_176101.1 |
CG30492-RE, transcript variant E (CG30492), mRNA |
| 0 |
0 |
1 |
3 |
9 |
NM_057391.3 |
CG1977-RA (alpha-Spec), mRNA |
| 0 |
0 |
1 |
2 |
3 |
NM_170175.1 |
CG31105-RA (CG31105), mRNA |
| 0 |
0 |
1 |
2 |
3 |
NM_135363.2 |
CG7806-RA (CG7806), mRNA |
| 0 |
0 |
1 |
2 |
2 |
NM_165879.1 |
CG8841-RB, transcript variant B (CG8841), mRNA |
| 0 |
0 |
1 |
2 |
2 |
NM_136916.2 |
CG8841-RA, transcript variant A (CG8841), mRNA |
| 0 |
0 |
1 |
2 |
2 |
NM_165880.1 |
CG8841-RC, transcript variant C (CG8841), mRNA |
| 0 |
0 |
1 |
2 |
2 |
NM_141817.2 |
CG5276-RA (CG5276), mRNA |
| 0 |
0 |
0 |
6 |
3 |
NM_206796.1 |
CG33499-RA (Sdic:CG33499), mRNA |
| 0 |
0 |
0 |
6 |
3 |
NM_057730.4 |
CG18000-RE, transcript variant E (sw), mRNA |
| 0 |
0 |
0 |
6 |
3 |
NM_057724.3 |
CG18000-RI, transcript variant I (sw), mRNA |
| 0 |
0 |
0 |
6 |
3 |
NM_057722.3 |
CG18000-RG, transcript variant G (sw), mRNA |
| 0 |
0 |
0 |
6 |
3 |
NM_057723.3 |
CG18000-RH, transcript variant H (sw), mRNA |
| 0 |
0 |
0 |
6 |
3 |
NM_057726.3 |
CG18000-RA, transcript variant A (sw), mRNA |
| 0 |
0 |
0 |
6 |
3 |
NM_057729.3 |
CG18000-RB, transcript variant B (sw), mRNA |
| 0 |
0 |
0 |
6 |
3 |
NM_057728.3 |
CG18000-RC, transcript variant C (sw), mRNA |
| 0 |
0 |
0 |
6 |
3 |
NM_206793.1 |
CG33497-RA (Sdic:CG33497), mRNA |
| 0 |
0 |
0 |
6 |
3 |
NM_079931.3 |
CG9580-RA (Sdic:CG9580), mRNA |
| 0 |
0 |
0 |
6 |
3 |
NM_206799.1 |
CG18000-RL, transcript variant L (sw), mRNA |
|
| Wing Disc |
GFP
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Puc
 |
Caspase
 |
DAPI
 |
Merge
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Figure
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JNK signal
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Caspase-3 signal
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