Notice:
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Suspension of shipments during Golden Week Holidays: From 30 April to 14 May, deadline 17 April.
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NIG-RNAi Strains Detail |
Request : Click the "Order" button to request for this stock |
discarded
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Stock Detail (Last Update: November 2007_FlyBase version FB2007_11) |
Stock ID |
18155R-2 |
Symbol |
CG18155 |
Full Name |
CG18155 |
CG No |
CG18155 |
Old CG No |
CG18155 |
Synonyms |
FBgn0029945, CG18155 |
Accession No (Link to NCBI) |
NM_132164.1 |
Inserted Chr. |
lll |
Insertional Mutation |
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Phenotype induced by Act5C-GAL4 at 28 degrees |
viable |
Map Viewer |
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Reference
[Please submit your publication]
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Rauskolb C, Pan G, Reddy BV, Oh H, Irvine KD. Zyxin links fat signaling to the hippo pathway. PLoS Biol (2011) 9(6) e1000624
[
PubMed ID = 21666802
]
[
RRC reference
]
Umemori M, Habara O, Iwata T, Maeda K, Nishinoue K, Okabe A, Takemura M, Takahashi K, Saigo K, Ueda R, Adachi-Yamada T. RNAi-mediated knockdown showing impaired cell survival in Drosophila wing imaginal disc. Gene Regul Syst Bio (2009) 3 11-20
[
PubMed ID = 19838331
]
[
RRC reference
]
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Comment |
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Sequence (Last Update: July 10, 2007_NCBI RefSeq Release 24) |
Primer Seq. 5' |
aaggcctacatggccggaccgCTGGTGGCGATCCAGGGTGTT |
Primer Seq. 3' |
aatctagaggtaccACCGAATCCGGTAGCAAGGCA |
Predicted Fragment Size |
500 |
IR fragment full Seq |
0001 CTGGTGGCGA TCCAGGGTGT TATCGTAACG GAAAATACGT TTCCAAACGA TTTCTATTCC
0061 AAGGCACCAG CCATGCTGAT CTATACGCCC AATGCGGTCA ATAGTCCCAA GCCAGTGTTG
0121 TTGACCCATC GGAATATCGA AGCTCAGATG CGATGTTTGA TCGGAACTTG GCATTTGGGA
0181 CCTACAGACT GTATGCTGCC AATACTATCC ATGAATCGAA TGCATGCCGC CTTGGCAGCA
0241 GTTCTCAGTG TGGGCGGTAA TGTGGTGTTG CAGCAAAAAT TCGATGGTCA CAATGCGTGG
0301 AGTGCTCTAT TGGGCATAAA TAGCCCATCC AAGCAACGGG TCACCCTCTT TTTGGCCATG
0361 CCAATTTGTC TACAAGCGTC TGATTGTCGA GTATGAGAAA ATGTTTGCCA AGGATTCGAG
0421 AATGGTTGAG TACATTGTGA ATCATTGCCG GCAAAAGATA CGATTGATGG CGACAGCTTT
0481 TGCCTTGCTA CCGGATTCGG T |
in silico PCR Fragment |
0001 CTGGTGGCGA TCCAGGGTGT TATCGTAACG GAAAATACGT TTCCAAACGA TTTCTATTCC
0061 AAGGCACCAG CCATGCTGAT CTATACGCCC AATGCGGTCA ATAGTCCCAA GCCAGTGTTG
0121 TTGACCCATC GGAATATCGA AGCTCAGATG CGATGTTTGA TCGGAACTTG GCATTTGGGA
0181 CCTACAGACT GTATGCTGCC AATACTATCC ATGAATCGAA TGCATGCCGC CTTGGCAGCA
0241 GTTCTCAGTG TGGGCGGTAA TGTGGTGTTG CAGCAAAAAT TCGATGGTCA CAATGCGTGG
0301 AGTGCTCTAT TGGGCATAAA TAGCCCATCC AAGCAACGGG TCACCCTCTT TTTGGCCATG
0361 CCAA-TTGTC TACAAGCGTC TGATTGTCGA GTATGAGAAA ATGTTTGCCA AGGATTCGAG
0421 AATGGTTGAG TACATTGTGA ATCATTGCCG GCAAAAGATA CGATTGATGG CGACAGCTTT
0481 TGCCTTGCTA CCGGATTCGG T |
Assemble Data |
18155R-2.IR_full 1 CTGGTGGCGATCCAGGGTGTTATCGTAACGGAAAATACGTTTCCAAACGATTTCTATTCC 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
18155R-2.in silico 1 CTGGTGGCGATCCAGGGTGTTATCGTAACGGAAAATACGTTTCCAAACGATTTCTATTCC 60
18155R-2.IR_full 61 AAGGCACCAGCCATGCTGATCTATACGCCCAATGCGGTCAATAGTCCCAAGCCAGTGTTG 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
18155R-2.in silico 61 AAGGCACCAGCCATGCTGATCTATACGCCCAATGCGGTCAATAGTCCCAAGCCAGTGTTG 120
18155R-2.IR_full 121 TTGACCCATCGGAATATCGAAGCTCAGATGCGATGTTTGATCGGAACTTGGCATTTGGGA 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
18155R-2.in silico 121 TTGACCCATCGGAATATCGAAGCTCAGATGCGATGTTTGATCGGAACTTGGCATTTGGGA 180
18155R-2.IR_full 181 CCTACAGACTGTATGCTGCCAATACTATCCATGAATCGAATGCATGCCGCCTTGGCAGCA 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
18155R-2.in silico 181 CCTACAGACTGTATGCTGCCAATACTATCCATGAATCGAATGCATGCCGCCTTGGCAGCA 240
18155R-2.IR_full 241 GTTCTCAGTGTGGGCGGTAATGTGGTGTTGCAGCAAAAATTCGATGGTCACAATGCGTGG 300
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18155R-2.in silico 241 GTTCTCAGTGTGGGCGGTAATGTGGTGTTGCAGCAAAAATTCGATGGTCACAATGCGTGG 300
18155R-2.IR_full 301 AGTGCTCTATTGGGCATAAATAGCCCATCCAAGCAACGGGTCACCCTCTTTTTGGCCATG 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
18155R-2.in silico 301 AGTGCTCTATTGGGCATAAATAGCCCATCCAAGCAACGGGTCACCCTCTTTTTGGCCATG 360
18155R-2.IR_full 361 CCAATTTGTCTACAAGCGTCTGATTGTCGAGTATGAGAAAATGTTTGCCAAGGATTCGAG 420
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
18155R-2.in silico 361 CCAA-TTGTCTACAAGCGTCTGATTGTCGAGTATGAGAAAATGTTTGCCAAGGATTCGAG 420
18155R-2.IR_full 421 AATGGTTGAGTACATTGTGAATCATTGCCGGCAAAAGATACGATTGATGGCGACAGCTTT 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
18155R-2.in silico 421 AATGGTTGAGTACATTGTGAATCATTGCCGGCAAAAGATACGATTGATGGCGACAGCTTT 480
18155R-2.IR_full 481 TGCCTTGCTACCGGATTCGGT 501
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18155R-2.in silico 481 TGCCTTGCTACCGGATTCGGT 501
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Off-target information (Last Update: November 4, 2007_NCBI RefSeq Release 26) |
Off-target search result
cv : coefficient of variation
(0 mm hits / total siRNA count)
mm : mismatch
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cv |
0mm |
1mm |
2mm |
3mm |
target transcript |
off target name |
100 |
482 |
0 |
0 |
0 |
NM_206637.1 |
CG18155-RB, transcript variant B (CG18155), mRNA |
100 |
482 |
0 |
0 |
0 |
NM_132164.1 |
CG18155-RA, transcript variant A (CG18155), mRNA |
0 |
0 |
2 |
2 |
2 |
NM_139695.1 |
CG4597-RA (CG4597), mRNA |
0 |
0 |
1 |
3 |
5 |
NM_166030.1 |
CG8118-RB, transcript variant B (mam), mRNA |
0 |
0 |
1 |
3 |
5 |
NM_080376.1 |
CG8118-RA, transcript variant A (mam), mRNA |
0 |
0 |
1 |
3 |
3 |
NM_001014545.1 |
CG33519-RB (Unc-89), mRNA |
0 |
0 |
1 |
2 |
5 |
NM_078694.2 |
CG17058-RA, transcript variant A (Peritrophin-A), mRNA |
0 |
0 |
1 |
2 |
5 |
NM_167694.1 |
CG17058-RB, transcript variant B (Peritrophin-A), mRNA |
0 |
0 |
1 |
2 |
4 |
NM_175983.1 |
CG8222-RC, transcript variant C (Pvr), mRNA |
0 |
0 |
1 |
2 |
4 |
NM_205926.1 |
CG8222-RE, transcript variant E (Pvr), mRNA |
0 |
0 |
1 |
2 |
4 |
NM_205925.1 |
CG8222-RF, transcript variant F (Pvr), mRNA |
0 |
0 |
1 |
2 |
4 |
NM_078785.2 |
CG8222-RA, transcript variant A (Pvr), mRNA |
0 |
0 |
1 |
2 |
4 |
NM_164801.1 |
CG8222-RB, transcript variant B (Pvr), mRNA |
0 |
0 |
1 |
2 |
4 |
NM_205927.1 |
CG8222-RD, transcript variant D (Pvr), mRNA |
0 |
0 |
1 |
2 |
3 |
NM_176408.1 |
CG33097-RA, transcript variant A (CG33097), mRNA |
0 |
0 |
1 |
2 |
3 |
NM_001043218.1 |
CG33097-RB, transcript variant B (CG33097), mRNA |
0 |
0 |
1 |
2 |
2 |
NM_080341.2 |
CG12737-RA, transcript variant A (Crag), mRNA |
0 |
0 |
1 |
2 |
2 |
NM_167164.2 |
CG12737-RB, transcript variant B (Crag), mRNA |
0 |
0 |
1 |
1 |
1 |
NM_130543.3 |
CG32812-RA (CG32812), mRNA |
0 |
0 |
0 |
5 |
5 |
NM_136041.1 |
CG10231-RA (Pde11), mRNA |
0 |
0 |
0 |
4 |
4 |
NM_001014604.1 |
CG9795-RD, transcript variant D (CG9795), mRNA |
0 |
0 |
0 |
4 |
4 |
NM_141197.3 |
CG9795-RA, transcript variant A (CG9795), mRNA |
0 |
0 |
0 |
4 |
4 |
NM_176396.1 |
CG9795-RC, transcript variant C (CG9795), mRNA |
0 |
0 |
0 |
4 |
4 |
NM_164338.2 |
CG9795-RB, transcript variant B (CG9795), mRNA |
0 |
0 |
0 |
4 |
2 |
NM_205898.1 |
CG33281-RA (CG33281), mRNA |
0 |
0 |
0 |
4 |
2 |
NM_078656.3 |
CG9108-RA (RSG7), mRNA |
0 |
0 |
0 |
4 |
2 |
NM_206430.1 |
CG2666-RC, transcript variant C (kkv), mRNA |
0 |
0 |
0 |
4 |
2 |
NM_079509.1 |
CG2666-RA, transcript variant A (kkv), mRNA |
0 |
0 |
0 |
4 |
2 |
NM_169052.1 |
CG2666-RB, transcript variant B (kkv), mRNA |
0 |
0 |
0 |
3 |
8 |
NM_135506.1 |
CG13137-RA (CG13137), mRNA |
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Wing Disc |
GFP
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Puc
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Caspase
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DAPI
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Merge
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Figure
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JNK signal
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Caspase-3 signal
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