National Institute of Genetics
Contact us      Quick Search       
NIG-Fly - Fly Stocks of National Institute of Genetics (NIG) Drosophila strain -NIG-Fly - Fly Stocks of National Institute of Genetics (NIG) Drosophila strain -NIG-Fly - Fly Stocks of National Institute of Genetics (NIG) Drosophila strain -
Home Home
Japanese | English  
NIG-RNAi Strains Detail
Request : Click the "Order" button to request for this stock discarded request_help.gif
Stock Detail (Last Update: November 2007_FlyBase version FB2007_11)
 Stock ID 18102R-2 
 Symbol shi  Full Name shibire 
 CG No CG18102  Old CG No CG18102 
 Synonyms Dyn, Shi, CG18102, Ddyn4, Ddyn3, Ddyn, l(1)shi, l(1)VII, anon-WO0153538.14, anon-WO0153538.13, anon-WO0153538.12, shi 
 Accession No (Link to NCBI)  
 Inserted Chr. ll 
 Insertional Mutation   
 Phenotype induced by Act5C-GAL4 at 28 degrees lethal 
 Map Viewer
 Reference
[Please submit your publication]
Sun T, Song Y, Dai J, Mao D, Ma M, Ni JQ, Liang X, Pastor-Pareja JC.
Spectraplakin Shot Maintains Perinuclear Microtubule Organization in Drosophila Polyploid Cells.
Dev Cell (2019) 49(5) 731-747.e7 [ PubMed ID = 31006649 ] [ RRC reference ]  
 Comment  
 Sequence (Last Update: July 10, 2007_NCBI RefSeq Release 24)
 Primer Seq. 5'
aaggcctacatggccggaccgTCGCCGCACGTACTCAATTTA 
 Primer Seq. 3'
aatctagaggtaccGTGTCCCTGATGTGATTGGTT 
 Predicted Fragment Size
500 
 IR fragment full Seq
 
 in silico PCR Fragment
 
 Assemble Data

18102R-2.IR full       1   TCGCCGCACGTACTCAATTTAACCCTGATCGATTTGCCCGGCCTAACAAAGGTGGCCATT 60
                           |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
18102R-2.in silico     1   TCGCCGCACGTACTCAATTTAACCCTGATCGATTTGCCAGGCCTGACAAAGGTGGCCATT 60


18102R-2.IR full       61  GGCGATCAACCGGTGGATATTGAGCAGCAAATTAAGCAGATGATATTCCAATTTATTCGC 120
                           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
18102R-2.in silico     61  GGCGATCAACCGGTGGATATTGAGCAGCAAATTAAGCAGATGATATTCCAATTTATTCGC 120


18102R-2.IR full       121 AAAGAGACTTGTTTAATTTTGGCTGTGACCCCGGCCAATACGGATCTGGCCAATTCGGAT 180
                           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
18102R-2.in silico     121 AAAGAGACTTGTTTAATTTTGGCTGTGACCCCGGCCAATACGGATCTGGCCAATTCGGAT 180


18102R-2.IR full       181 GCCCTCAAGCTGGCCAAGGAGGTGGATCCACAGGGTGTGCGAACCATTGGCGTTATAACC 240
                           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
18102R-2.in silico     181 GCCCTCAAGCTGGCCAAGGAGGTGGATCCACAGGGTGTGCGAACCATTGGCGTTATAACC 240


18102R-2.IR full       241 AAGCTGGATCTGATGGACGAGGGCACCGATGCACGCGACATTCTGGAGAATAAGCTGCTT 300
                           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
18102R-2.in silico     241 AAGCTGGATCTGATGGACGAGGGCACCGATGCACGCGACATTCTGGAGAATAAGCTGCTT 300


18102R-2.IR full       301 CCGCTGCGACGTGGCTATATTGGCGTGGTGAATAGATCCCAAAAGGATATCGAGGGGCGC 360
                           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
18102R-2.in silico     301 CCGCTGCGACGTGGCTATATTGGCGTGGTGAATAGATCCCAAAAGGATATCGAGGGGCGC 360


18102R-2.IR full       361 AAGGATATCCACCAGGCATTGGCCGCCGAACGCAAGTTCTTCTTGAGCCATCCCTCCTAT 420
                           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
18102R-2.in silico     361 AAGGATATCCACCAGGCATTGGCCGCCGAACGCAAGTTCTTCTTGAGCCATCCCTCCTAT 420


18102R-2.IR full       421 CGGCACATGGNCGANCGTCTCGGCACCCCCTACTTGCAGCGCGTGCTCAACCAACAACTA 480
                           |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||
18102R-2.in silico     421 CGGCACATGGCCGACCGTCTCGGCACCCCCTACTTGCAGCGCGTGCTCAACCAACAACTA 480


18102R-2.IR full       481 ACCAATCACATCAGGGACAC 500
                           ||||||||||||||||||||
18102R-2.in silico     481 ACCAATCACATCAGGGACAC 500

 
 Off-target information (Last Update: November 4, 2007_NCBI RefSeq Release 26)
 Off-target search result

cv : coefficient of variation

(0 mm hits / total siRNA count)

mm : mismatch
 

SHIGEN - SHared Information of GENetic resources - National Institute of Genetics (NIG)
Copyright (c) National Institute of Genetics (NIG)
All rights reserved.
The NIG-Fly is a part of the National BioResource Project which started in 2002.