Notice:
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Suspension of shipments during Golden Week Holidays: From 30 April to 14 May, deadline 17 April.
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NIG-RNAi Strains Detail |
Request : Click the "Order" button to request for this stock |
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Stock Detail (Last Update: November 2007_FlyBase version FB2007_11) |
Stock ID |
1725R-1 |
Symbol |
dlg1 |
Full Name |
discs large 1 |
CG No |
CG1725 |
Old CG No |
CG1725 |
Synonyms |
dlg, DLG, Dlg, Discs-large, Dlg-A, anon-EST:Posey93, Dlg1, dlg-A, misb, CG1725, DLG-A, DlgA, dlgA, dlg-1, Drodlg, l(1)dlg1, l(1)dlg, l(1)10Bf, l(1)d.lg-1, l(1)discs large, l(1)bwn, l(1)dlg-1, d. lg.-1, l(1)L11, 11, l(1)lpr-2, l(1)d.lg.-1, l(1)G0276, l(1)G0342, l(1)G0456, l(1)l.pr.-2, l(1)G19, CG1730, anon-WO03040301.258, anon-WO03040301.268, anon-WO03040301.260, dlg1, discs large 1, lethal(1)benign wing imaginal disc neoplasm, discs large, lethal(2)discs large, Discs large, lethal(1)discs-large, discs-large, Discs Large, Disc Large, lethal(1)discs large, discslarge, Discs-Large, Discslarge, disc-large |
Accession No (Link to NCBI) |
NM_206683.2 |
Inserted Chr. |
lll |
Insertional Mutation |
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Phenotype induced by Act5C-GAL4 at 28 degrees |
lethal |
Map Viewer |
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Reference
[Please submit your publication]
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Minami R, Sato C, Yamahama Y, Kubo H, Hariyama T, Kimura KI. An RNAi Screen for Genes Involved in Nanoscale Protrusion Formation on Corneal Lens in Drosophila melanogaster. Zoolog Sci (2016) 33(6) 583-591
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PubMed ID = 27927092
]
[
RRC reference
]
Tiwari P, Kumar A, Das RN, Malhotra V, VijayRaghavan K. A Tendon Cell Specific RNAi Screen Reveals Novel Candidates Essential for Muscle Tendon Interaction. PLoS One (2015) 10(10) e0140976
[
PubMed ID = 26488612
]
[
RRC reference
]
Wang Y, Antunes M, Anderson AE, Kadrmas JL, Jacinto A, Galko MJ. Integrin Adhesions Suppress Syncytium Formation in the Drosophila Larval Epidermis. Curr Biol (2015) 25(17) 2215-27
[
PubMed ID = 26255846
]
[
RRC reference
]
Swarup S, Pradhan-Sundd T, Verheyen EM. Genome-wide identification of phospho-regulators of Wnt signaling in Drosophila. Development (2015) 142(8) 1502-15
[
PubMed ID = 25852200
]
[
RRC reference
]
Kim MJ, Choe KM. Basement membrane and cell integrity of self-tissues in maintaining Drosophila immunological tolerance. PLoS Genet (2014) 10(10) e1004683
[
PubMed ID = 25329560
]
[
RRC reference
]
Umetsu D, Dunst S, Dahmann C. An RNA interference screen for genes required to shape the anteroposterior compartment boundary in Drosophila identifies the Eph receptor. PLoS One (2014) 9(12) e114340
[
PubMed ID = 25473846
]
[
RRC reference
]
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Comment |
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Sequence (Last Update: July 10, 2007_NCBI RefSeq Release 24) |
Primer Seq. 5' |
aaggcctacatggccggaccgGCTTTGCTACACACAAGACGA |
Primer Seq. 3' |
aatctagaggtaccCTACATCACTGAATCCACCGA |
Predicted Fragment Size |
475 |
IR fragment full Seq |
0001 GCTTTGCTAC ACACAAGACG ATGCCAATGC TGAAGGAGCT TCCGAGGAGA ACGTGTTGTC
0061 CTACGAGGCC GTACAGCGTT TGTCCATCAA CTACACGCGC CCGGTGATTA TTCTGGGACC
0121 CCTGAAGGAT CGCATCAACG ATGACCTTAT ATCAGAGTAT CCCGACAAGT TCGGCTCCTG
0181 TGTGCCACAC ACCACCCGAC CCAAGCGAGA GTACGAGGTG GATGGTAGGG ACTACCACTT
0241 TGTATCCTCT CGCGAGCAAA TGGAACGGGA TATTCAGAAT CATCTGTTCA TCGAGGCGGG
0301 ACAGTATAAC GACAATCTGT ACGGCACATC GGTGGCCAGC GTGCGCGAAG TGGCCGAGAA
0361 GGGTAAACAC TGCATCCTGG ACGTGTCCGG GAACGCCATC AAGCGACTCC AAGTTGCCCA
0421 GCTGTATCCC GTCGCCGTGT TCATCAAGCC CAAGTCGGTG GATTCAGTGA TGTAG |
in silico PCR Fragment |
0001 GCTTTGCTAC ACACAAGACG ATGCCAATGC TGAAGGAGCT TCCGAGGAGA ACGTGTTGTC
0061 CTACGAGGCC GTACAGCGTT TGTCCATCAA CTACACGCGC CCGGTGATTA TTCTGGGACC
0121 CCTGAAGGAT CGCATCAACG ATGACCTTAT ATCAGAGTAT CCCGACAAGT TCGGCTCTTG
0181 TGTGCCACAC ACCACCCGAC CCAAGCGAGA GTACGAGGTG GATGGTAGGG ACTACCACTT
0241 TGTATCCTCT CGCGAGCAAA TGGAACGGGA TATTCAGAAT CATCTGTTCA TCGAGGCGGG
0301 ACAGTATAAC GACAATCTGT ACGGCACATC GGTGGCCAGC GTGCGCGAAG TGGCCGAGAA
0361 GGGTAAACAC TGCATCCTGG ACGTGTCCGG GAACGCCATC AAGCGACTCC AAGTTGCCCA
0421 GCTGTATCCC GTCGCCGTGT TCATCAAGCC CAAGTCGGTG GATTCAGTGA TGGAA |
Assemble Data |
1725R-1.IR_full 1 GCTTTGCTACACACAAGACGATGCCAATGCTGAAGGAGCTTCCGAGGAGAACGTGTTGTC 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
1725R-1.in silico 1 GCTTTGCTACACACAAGACGATGCCAATGCTGAAGGAGCTTCCGAGGAGAACGTGTTGTC 60
1725R-1.IR_full 61 CTACGAGGCCGTACAGCGTTTGTCCATCAACTACACGCGCCCGGTGATTATTCTGGGACC 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
1725R-1.in silico 61 CTACGAGGCCGTACAGCGTTTGTCCATCAACTACACGCGCCCGGTGATTATTCTGGGACC 120
1725R-1.IR_full 121 CCTGAAGGATCGCATCAACGATGACCTTATATCAGAGTATCCCGACAAGTTCGGCTCCTG 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
1725R-1.in silico 121 CCTGAAGGATCGCATCAACGATGACCTTATATCAGAGTATCCCGACAAGTTCGGCTCTTG 180
1725R-1.IR_full 181 TGTGCCACACACCACCCGACCCAAGCGAGAGTACGAGGTGGATGGTAGGGACTACCACTT 240
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1725R-1.in silico 181 TGTGCCACACACCACCCGACCCAAGCGAGAGTACGAGGTGGATGGTAGGGACTACCACTT 240
1725R-1.IR_full 241 TGTATCCTCTCGCGAGCAAATGGAACGGGATATTCAGAATCATCTGTTCATCGAGGCGGG 300
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1725R-1.in silico 241 TGTATCCTCTCGCGAGCAAATGGAACGGGATATTCAGAATCATCTGTTCATCGAGGCGGG 300
1725R-1.IR_full 301 ACAGTATAACGACAATCTGTACGGCACATCGGTGGCCAGCGTGCGCGAAGTGGCCGAGAA 360
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1725R-1.in silico 301 ACAGTATAACGACAATCTGTACGGCACATCGGTGGCCAGCGTGCGCGAAGTGGCCGAGAA 360
1725R-1.IR_full 361 GGGTAAACACTGCATCCTGGACGTGTCCGGGAACGCCATCAAGCGACTCCAAGTTGCCCA 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
1725R-1.in silico 361 GGGTAAACACTGCATCCTGGACGTGTCCGGGAACGCCATCAAGCGACTCCAAGTTGCCCA 420
1725R-1.IR_full 421 GCTGTATCCCGTCGCCGTGTTCATCAAGCCCAAGTCGGTGGATTCAGTGATGTAG 475
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
1725R-1.in silico 421 GCTGTATCCCGTCGCCGTGTTCATCAAGCCCAAGTCGGTGGATTCAGTGATGGAA 475
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Off-target information (Last Update: November 4, 2007_NCBI RefSeq Release 26) |
Off-target search result
cv : coefficient of variation
(0 mm hits / total siRNA count)
mm : mismatch
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cv |
0mm |
1mm |
2mm |
3mm |
target transcript |
off target name |
100 |
457 |
0 |
0 |
0 |
NM_206683.2 |
CG1725-RB, transcript variant B (dlg1), mRNA |
100 |
457 |
0 |
0 |
0 |
NM_206681.2 |
CG1725-RH, transcript variant H (dlg1), mRNA |
100 |
457 |
0 |
0 |
0 |
NM_206682.2 |
CG1725-RG, transcript variant G (dlg1), mRNA |
91.68 |
419 |
2 |
1 |
1 |
NM_206684.2 |
CG1725-RE, transcript variant E (dlg1), mRNA |
91.68 |
419 |
2 |
1 |
1 |
NM_078565.3 |
CG1725-RD, transcript variant D (dlg1), mRNA |
91.68 |
419 |
2 |
1 |
1 |
NM_167282.2 |
CG1725-RA, transcript variant A (dlg1), mRNA |
4.37 |
20 |
1 |
1 |
1 |
NM_167281.1 |
CG1725-RF, transcript variant F (dlg1), mRNA |
0.21 |
1 |
2 |
2 |
3 |
NM_132500.2 |
CG11699-RA (CG11699), mRNA |
0 |
0 |
3 |
3 |
7 |
NM_140686.3 |
CG3764-RA (CG3764), mRNA |
0 |
0 |
3 |
3 |
4 |
NM_140327.1 |
CG10522-RA (sti), mRNA |
0 |
0 |
2 |
3 |
3 |
NM_135328.1 |
CG7219-RA (CG7219), mRNA |
0 |
0 |
1 |
6 |
3 |
NM_135812.2 |
CG16954-RA, transcript variant A (Hsp60D), mRNA |
0 |
0 |
1 |
6 |
3 |
NM_165043.1 |
CG16954-RB, transcript variant B (Hsp60D), mRNA |
0 |
0 |
1 |
3 |
4 |
NM_135117.1 |
CG11034-RA (CG11034), mRNA |
0 |
0 |
1 |
3 |
3 |
NM_167965.1 |
CG32296-RA (Mrtf), mRNA |
0 |
0 |
1 |
2 |
3 |
NM_139388.1 |
CG13930-RA (CG13930), mRNA |
0 |
0 |
1 |
2 |
3 |
NM_134726.2 |
CG4715-RA (Iris), mRNA |
0 |
0 |
1 |
2 |
3 |
NM_137721.1 |
CG18375-RA, transcript variant A (CG18375), mRNA |
0 |
0 |
1 |
2 |
3 |
NM_176243.1 |
CG18375-RB, transcript variant B (CG18375), mRNA |
0 |
0 |
1 |
2 |
3 |
NM_206341.1 |
CG6024-RB, transcript variant B (CG6024), mRNA |
0 |
0 |
1 |
2 |
3 |
NM_140246.1 |
CG6024-RA, transcript variant A (CG6024), mRNA |
0 |
0 |
0 |
6 |
3 |
NM_139893.2 |
CG7457-RA (CG7457), mRNA |
0 |
0 |
0 |
5 |
2 |
NM_132703.2 |
CG32626-RC, transcript variant C (CG32626), mRNA |
0 |
0 |
0 |
5 |
2 |
NM_167384.1 |
CG32626-RA, transcript variant A (CG32626), mRNA |
0 |
0 |
0 |
5 |
2 |
NM_167385.1 |
CG32626-RB, transcript variant B (CG32626), mRNA |
0 |
0 |
0 |
5 |
2 |
NM_167386.1 |
CG32626-RD, transcript variant D (CG32626), mRNA |
0 |
0 |
0 |
4 |
7 |
NM_165257.1 |
CG31790-RA (CG31790), mRNA |
0 |
0 |
0 |
4 |
5 |
NM_167641.1 |
CG14195-RA (CG14195), mRNA |
0 |
0 |
0 |
4 |
3 |
NM_138107.2 |
CG4781-RA (CG4781), mRNA |
0 |
0 |
0 |
3 |
9 |
NM_079700.1 |
CG3723-RA (Dhc93AB), mRNA |
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