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NIG-RNAi Strains Detail
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Stock Detail (Last Update: November 2007_FlyBase version FB2007_11)
 Stock ID 14050R-1 
 Symbol CG14050  Full Name CG14050 
 CG No CG14050  Old CG No CG14050 
 Synonyms H48C10.1, EG:BACH48C10.1, CG14050 
 Accession No (Link to NCBI) NM_130642.1 
 Inserted Chr. ll 
 Insertional Mutation   
 Phenotype induced by Act5C-GAL4 at 28 degrees viable 
 Map Viewer
 Reference
[Please submit your publication]
Rauskolb C, Pan G, Reddy BV, Oh H, Irvine KD.
Zyxin links fat signaling to the hippo pathway.
PLoS Biol (2011) 9(6) e1000624 [ PubMed ID = 21666802 ] [ RRC reference ]  
 Comment  
 Sequence (Last Update: July 10, 2007_NCBI RefSeq Release 24)
 Primer Seq. 5'
aaggcctacatggccggaccgAAAAGTATCCGAACCCGGTGA 
 Primer Seq. 3'
aatctagaggtaccAGTCTGGGCCACAGAAACATC 
 Predicted Fragment Size
500 
 IR fragment full Seq
0001 AAAAGTATCC GAACCCGGTG ACCAAGCACT TCGTCTATAG CGAAAGGACG CGAAAAAGTA 
0061 CCTGCAAAAG GTGCCACTTC GATATGGCAG GTCGCCACTC CGAGAATCTG ATGCGGCATT 
0121 TGAAACGTAA GCATGAGGAT GCCTACAAAA GTGTTCTGGA CGAGAAGCGA GAAATNCCGT 
0181 GCGGCACTTG CCCAGCAGCA GGCCAACAAA GATGCAGTCA ATCCGACGAA GAAAGTCCTG 
0241 GCCTCTAAGT ATCCTCTATA TCCAACGACA CGAAAGCAGT CTTTCATTAC CGAGGACGAC 
0301 GACTCCCAGC ACAGTGGCAT GGAAACCATG GTGACGTTGA ATGGTGAAGA GACCGGGGAC 
0361 GTAGATAACA AGAACAACGC TACAGTCAGT CAGTTCGAGG GCGTTTTTAT TGGAAAATCG 
0421 GAGATACCTG ACGAGGAGTA TCAGTGGAAA AACTCTGCAA ATATGGAACT GAAGGCCGTC 
0481 GATGTTTCTG TGGCCCAGAC T 
 in silico PCR Fragment
0001 AAAAGTATCC GAACCCGGTG ACCAAGCACT TCGTCTATAG CGAAAGGACG CGAAAAAGTA 
0061 CCTGCAAAAG GTGCCACTTC GATATGGCAG GTCGCCACTC CGAGAATCTG ATGCGGCATT 
0121 TGAAACGTAA GCATGAGGAT GCCTACAAAA GTGTTCTGGA CGAGAAGCGA GAAAT-CCGT 
0181 GCGGCACTTG CCCAGCAGCA GGCCAACAAA GATGCAGTCA ATCCGACGAA GAAAGTCTTG 
0241 GCCTCTAAGT ATCCTCTATA TCCAACGACA CGAAAGCAGT CTTTCATTAC CGAGGACGAC 
0301 GACTCCCAGC ACAGTGGCAT GGAAACCATG GTGACGTTGA ATGGTGAAGA GACCGGGGAC 
0361 GTAGATAACA AGAACAACGC TACAGTCAGT CAGTTCGAGG GCGTTTTTAT TGGAAAATCG 
0421 GAGATACCTG ACGAGGAGTA TCAGTGGAAA AACTCTGCAA ATATGGAACT GAAGGCCGTC 
0481 GATGTTTCTG TGGCCCAGAC T 
 Assemble Data

14050R-1.IR_full       1   AAAAGTATCCGAACCCGGTGACCAAGCACTTCGTCTATAGCGAAAGGACGCGAAAAAGTA 60
                           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
14050R-1.in silico     1   AAAAGTATCCGAACCCGGTGACCAAGCACTTCGTCTATAGCGAAAGGACGCGAAAAAGTA 60


14050R-1.IR_full       61  CCTGCAAAAGGTGCCACTTCGATATGGCAGGTCGCCACTCCGAGAATCTGATGCGGCATT 120
                           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
14050R-1.in silico     61  CCTGCAAAAGGTGCCACTTCGATATGGCAGGTCGCCACTCCGAGAATCTGATGCGGCATT 120


14050R-1.IR_full       121 TGAAACGTAAGCATGAGGATGCCTACAAAAGTGTTCTGGACGAGAAGCGAGAAATNCCGT 180
                           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
14050R-1.in silico     121 TGAAACGTAAGCATGAGGATGCCTACAAAAGTGTTCTGGACGAGAAGCGAGAAAT-CCGT 180


14050R-1.IR_full       181 GCGGCACTTGCCCAGCAGCAGGCCAACAAAGATGCAGTCAATCCGACGAAGAAAGTCCTG 240
                           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
14050R-1.in silico     181 GCGGCACTTGCCCAGCAGCAGGCCAACAAAGATGCAGTCAATCCGACGAAGAAAGTCTTG 240


14050R-1.IR_full       241 GCCTCTAAGTATCCTCTATATCCAACGACACGAAAGCAGTCTTTCATTACCGAGGACGAC 300
                           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
14050R-1.in silico     241 GCCTCTAAGTATCCTCTATATCCAACGACACGAAAGCAGTCTTTCATTACCGAGGACGAC 300


14050R-1.IR_full       301 GACTCCCAGCACAGTGGCATGGAAACCATGGTGACGTTGAATGGTGAAGAGACCGGGGAC 360
                           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
14050R-1.in silico     301 GACTCCCAGCACAGTGGCATGGAAACCATGGTGACGTTGAATGGTGAAGAGACCGGGGAC 360


14050R-1.IR_full       361 GTAGATAACAAGAACAACGCTACAGTCAGTCAGTTCGAGGGCGTTTTTATTGGAAAATCG 420
                           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
14050R-1.in silico     361 GTAGATAACAAGAACAACGCTACAGTCAGTCAGTTCGAGGGCGTTTTTATTGGAAAATCG 420


14050R-1.IR_full       421 GAGATACCTGACGAGGAGTATCAGTGGAAAAACTCTGCAAATATGGAACTGAAGGCCGTC 480
                           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
14050R-1.in silico     421 GAGATACCTGACGAGGAGTATCAGTGGAAAAACTCTGCAAATATGGAACTGAAGGCCGTC 480


14050R-1.IR_full       481 GATGTTTCTGTGGCCCAGACT 501
                           |||||||||||||||||||||
14050R-1.in silico     481 GATGTTTCTGTGGCCCAGACT 501

 
 Off-target information (Last Update: November 4, 2007_NCBI RefSeq Release 26)
 Off-target search result

cv : coefficient of variation

(0 mm hits / total siRNA count)

mm : mismatch
 

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