| Stock Detail (Last Update: November 2007_FlyBase version FB2007_11) |
| Stock ID |
11415R-1 |
| Symbol |
Tsp2A |
Full Name |
Tetraspanin 2A |
| CG No |
CG11415 |
Old CG No |
CG11415 |
| Synonyms |
EG:8D8.7, CG11415, D8.7, Dm.Tsp2A, Tsp2A |
| Accession No (Link to NCBI) |
NM_080298.2 |
| Inserted Chr. |
ll |
| Insertional Mutation |
|
| Phenotype induced by Act5C-GAL4 at 28 degrees |
lethal |
| Map Viewer |
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Reference
[Please submit your publication]
|
Tiwari P, Kumar A, Das RN, Malhotra V, VijayRaghavan K.
A Tendon Cell Specific RNAi Screen Reveals Novel Candidates Essential for Muscle Tendon Interaction.
PLoS One (2015) 10(10) e0140976
[
PubMed ID = 26488612
]
[
RRC reference
]
|
| Comment |
|
| Sequence (Last Update: July 10, 2007_NCBI RefSeq Release 24) |
| Primer Seq. 5' |
aaggcctacatggccggaccgATCGGCTATGGAGCCTCCGAC |
| Primer Seq. 3' |
aatctagaggtaccAGATAATCCCATGGCCCGGTG |
| Predicted Fragment Size |
500 |
| IR fragment full Seq |
0001 ATCGGCTATG GAGCCTCCGA CGAGCAGCTG GAGAAGCAAA TTGGCTGCGT GAAATACACG
0061 CTATTTTGCT TCAACATCGT GGCCTGGATG ATATCCACAG CGCTGTTCGC CCTAACCGTC
0121 TGGTTGAGGG CTGAGCCCGG CTTCAACGAC TGGCTGCGCA TCCTGGAGGC ACAGTCCTTC
0181 TACATCGGCG TGTACGTGCT CATCGGCATC AGCATTGTAA TGATGGCCGT CAGCTTCCTC
0241 GGCTGCCTGA GCGCGCTCAT GGAGAACACC CTGGCTCTGT TTGTGTTCGT GGGCACCCAG
0301 GTCTTTGGGT TCATCGCCAT TGTGGCCGGG TCGGCGGTCC TATTGCAGTT CAGCACTATC
0361 AACTCGAGCC TGCAGCCGCT GCTGAATGTA TCGCTGCGCG GCTTTGTGGC CACATCGGAG
0421 TATACGTACT CGAACTACGT GCTGACCATG ATTCAGGAGA ACATAGGTTG TTGCGGGGCC
0481 ACCGGGCCAT GGGNATTATC T |
| in silico PCR Fragment |
0001 ATCGGCTATG GAGCCTCCGA CGAGCAGCTG GAGAAGCAAA TTGGCTGCGT GAAATACACG
0061 CTATTTTGCT TCAACATCGT GGCCTGGATG ATATCCACAG CGCTGTTCGC CCTAACCGTC
0121 TGGTTGAGGG CTGAGCCCGG CTTCAACGAC TGGCTGCGCA TCCTGGAGGC ACAGTCCTTC
0181 TACATCGGCG TGTACGTGCT CATCGGCATC AGCATTGTAA TGATGGCCGT CAGCTTCCTC
0241 GGCTGCCTGA GCGCGCTCAT GGAGAACACC CTGGCTCTGT TTGTGTTCGT GGGCACCCAG
0301 GTCTTTGGGT TCATCGCCAT TGTGGCCGGG TCGGCGGTCC TATTGCAGTT CAGCACTATC
0361 AACTCGAGCC TGCAGCCGCT GCTGAATGTA TCGCTGCGCG GCTTTGTGGC CACATCGGAG
0421 TATACGTACT CGAACTACGT GCTGACCATG ATTCAGGAGA ACATAGGTTG TTGCGGGGCC
0481 ACCGGGCCAT GGG-ATTATC T |
| Assemble Data |
11415R-1.IR_full 1 ATCGGCTATGGAGCCTCCGACGAGCAGCTGGAGAAGCAAATTGGCTGCGTGAAATACACG 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
11415R-1.in silico 1 ATCGGCTATGGAGCCTCCGACGAGCAGCTGGAGAAGCAAATTGGCTGCGTGAAATACACG 60
11415R-1.IR_full 61 CTATTTTGCTTCAACATCGTGGCCTGGATGATATCCACAGCGCTGTTCGCCCTAACCGTC 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
11415R-1.in silico 61 CTATTTTGCTTCAACATCGTGGCCTGGATGATATCCACAGCGCTGTTCGCCCTAACCGTC 120
11415R-1.IR_full 121 TGGTTGAGGGCTGAGCCCGGCTTCAACGACTGGCTGCGCATCCTGGAGGCACAGTCCTTC 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
11415R-1.in silico 121 TGGTTGAGGGCTGAGCCCGGCTTCAACGACTGGCTGCGCATCCTGGAGGCACAGTCCTTC 180
11415R-1.IR_full 181 TACATCGGCGTGTACGTGCTCATCGGCATCAGCATTGTAATGATGGCCGTCAGCTTCCTC 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
11415R-1.in silico 181 TACATCGGCGTGTACGTGCTCATCGGCATCAGCATTGTAATGATGGCCGTCAGCTTCCTC 240
11415R-1.IR_full 241 GGCTGCCTGAGCGCGCTCATGGAGAACACCCTGGCTCTGTTTGTGTTCGTGGGCACCCAG 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
11415R-1.in silico 241 GGCTGCCTGAGCGCGCTCATGGAGAACACCCTGGCTCTGTTTGTGTTCGTGGGCACCCAG 300
11415R-1.IR_full 301 GTCTTTGGGTTCATCGCCATTGTGGCCGGGTCGGCGGTCCTATTGCAGTTCAGCACTATC 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
11415R-1.in silico 301 GTCTTTGGGTTCATCGCCATTGTGGCCGGGTCGGCGGTCCTATTGCAGTTCAGCACTATC 360
11415R-1.IR_full 361 AACTCGAGCCTGCAGCCGCTGCTGAATGTATCGCTGCGCGGCTTTGTGGCCACATCGGAG 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
11415R-1.in silico 361 AACTCGAGCCTGCAGCCGCTGCTGAATGTATCGCTGCGCGGCTTTGTGGCCACATCGGAG 420
11415R-1.IR_full 421 TATACGTACTCGAACTACGTGCTGACCATGATTCAGGAGAACATAGGTTGTTGCGGGGCC 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
11415R-1.in silico 421 TATACGTACTCGAACTACGTGCTGACCATGATTCAGGAGAACATAGGTTGTTGCGGGGCC 480
11415R-1.IR_full 481 ACCGGGCCATGGGNATTATCT 501
||||||||||||| |||||||
11415R-1.in silico 481 ACCGGGCCATGGG-ATTATCT 501
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| Off-target information (Last Update: November 4, 2007_NCBI RefSeq Release 26) |
Off-target search result
cv : coefficient of variation
(0 mm hits / total siRNA count)
mm : mismatch
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