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Notice:
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Suspension of shipments during Golden Week Holidays: From 30 April to 14 May, deadline 17 April.
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| NIG-RNAi Strains Detail |
| Request : Click the "Order" button to request for this stock |
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| Stock Detail (Last Update: November 2007_FlyBase version FB2007_11) |
| Stock ID |
10802R-1 |
| Symbol |
CG10802 |
Full Name |
CG10802 |
| CG No |
CG10802 |
Old CG No |
CG10802 |
| Synonyms |
anon-EST:Posey113, CG10802 |
| Accession No (Link to NCBI) |
NM_130706.2 |
| Inserted Chr. |
ll |
| Insertional Mutation |
|
| Phenotype induced by Act5C-GAL4 at 28 degrees |
viable |
| Map Viewer |
|
Reference
[Please submit your publication]
|
Fairchild MJ, Islam F, Tanentzapf G.
Identification of genetic networks that act in the somatic cells of the testis to mediate the developmental program of spermatogenesis.
PLoS Genet (2017) 13(9) e1007026
[
PubMed ID = 28957323
]
[
RRC reference
]
Álvarez-Fernández C, Tamirisa S, Prada F, Chernomoretz A, Podhajcer O, Blanco E, Martín-Blanco E.
Identification and functional analysis of healing regulators in Drosophila.
PLoS Genet (2015) 11(2) e1004965
[
PubMed ID = 25647511
]
[
RRC reference
]
Tiwari P, Kumar A, Das RN, Malhotra V, VijayRaghavan K.
A Tendon Cell Specific RNAi Screen Reveals Novel Candidates Essential for Muscle Tendon Interaction.
PLoS One (2015) 10(10) e0140976
[
PubMed ID = 26488612
]
[
RRC reference
]
Rauskolb C, Pan G, Reddy BV, Oh H, Irvine KD.
Zyxin links fat signaling to the hippo pathway.
PLoS Biol (2011) 9(6) e1000624
[
PubMed ID = 21666802
]
[
RRC reference
]
Umemori M, Habara O, Iwata T, Maeda K, Nishinoue K, Okabe A, Takemura M, Takahashi K, Saigo K, Ueda R, Adachi-Yamada T.
RNAi-mediated knockdown showing impaired cell survival in Drosophila wing imaginal disc.
Gene Regul Syst Bio (2009) 3 11-20
[
PubMed ID = 19838331
]
[
RRC reference
]
|
| Comment |
|
| Sequence (Last Update: July 10, 2007_NCBI RefSeq Release 24) |
| Primer Seq. 5' |
aaggcctacatggccggaccgGTTCAAGTGCCAGGAGGACAG |
| Primer Seq. 3' |
aatctagaggtaccGGCCCTCGCGAATCAGATCGT |
| Predicted Fragment Size |
500 |
| IR fragment full Seq |
0001 GTTCAAGTGC CAGGAGGACA GTTTCCTGAA GGAGTTCAAG ACAAAAATCG TTAGCAGCGA
0061 GTTTGCCACC TTGGATTGGA CAGATCCCAG TGGAAAGGTG GAGAAACTCA AGGGCTTCAA
0121 TGTGATCTGC GAGGACACGA TACTATTTCC CGAGGGCGGT GGTCAGCCCT GCGANTTACG
0181 GAACCTTAGG CGGATTTCCA GTTAAGAATG TCCAGAGAAA AGGCTCTACG GCTGTACATT
0241 TTGTGGAATC CCCAACGAGT TTCGAGCAGG ATGCCGAAGT CCTTCTGACA CTAGACTACC
0301 AAAGAAGACT GGATCACATG CAACAGCACT CAGGACAGCA CCTGATCACC GCCCTGTTCG
0361 ACAGGGAGTT CAAGTACGAT NNCACCTCGT GGTCCCTGGG ATCCACTGTC TCTTACATTC
0421 AATTAAGTAC GCCTCATTTG ATAAGTCGCG AGTCATTGGA CCTCATCGAA CGTCAGGCCA
0481 ACGATCTGAT TCGCGAGGGC C |
| in silico PCR Fragment |
0001 GTTCAAGTGC CAGGAGGACA GTTTCCTGAA GGAGTTCAAG ACAAAAATCG TTAGCAGCGA
0061 GTTTGCCACC TTGGATTGGA CAGATCCCAG TGGAAAGGTG GAGAAACTCA AGGGCTTCAA
0121 TGTGATCTGC GAGGACACGA TACTATTTCC CGAGGGCGGT GGTCAGCCCT GCGA-TTACG
0181 GAACCTTAGG CGGATTTCCA GTTAAGAATG TCCAGAGAAA AGGCTCTACG GCTGTACATT
0241 TTGTGGAATC CCCAACGAGT TTCGAGCAGG ATGCCGAAGT CCTTCTGACA CTAGACTACC
0301 AAAGAAGACT GGATCACATG CAACAGCACT CAGGACAGCA CCTGATCACC GCCCTGTTCG
0361 ACAGGGAGTT CAAGTACGAT ACCACCTCGT GGTCCCTGGG ATCCACTGTC TCTTACATTC
0421 AATTAAGTAC GCCTCATTTG ATAAGTCGCG AGTCATTGGA CCTCATCGAA CGTCAGGCCA
0481 ACGATCTGAT TCGCGAGGGC C |
| Assemble Data |
10802R-1.IR_full 1 GTTCAAGTGCCAGGAGGACAGTTTCCTGAAGGAGTTCAAGACAAAAATCGTTAGCAGCGA 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
10802R-1.in silico 1 GTTCAAGTGCCAGGAGGACAGTTTCCTGAAGGAGTTCAAGACAAAAATCGTTAGCAGCGA 60
10802R-1.IR_full 61 GTTTGCCACCTTGGATTGGACAGATCCCAGTGGAAAGGTGGAGAAACTCAAGGGCTTCAA 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
10802R-1.in silico 61 GTTTGCCACCTTGGATTGGACAGATCCCAGTGGAAAGGTGGAGAAACTCAAGGGCTTCAA 120
10802R-1.IR_full 121 TGTGATCTGCGAGGACACGATACTATTTCCCGAGGGCGGTGGTCAGCCCTGCGANTTACG 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
10802R-1.in silico 121 TGTGATCTGCGAGGACACGATACTATTTCCCGAGGGCGGTGGTCAGCCCTGCGA-TTACG 180
10802R-1.IR_full 181 GAACCTTAGGCGGATTTCCAGTTAAGAATGTCCAGAGAAAAGGCTCTACGGCTGTACATT 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
10802R-1.in silico 181 GAACCTTAGGCGGATTTCCAGTTAAGAATGTCCAGAGAAAAGGCTCTACGGCTGTACATT 240
10802R-1.IR_full 241 TTGTGGAATCCCCAACGAGTTTCGAGCAGGATGCCGAAGTCCTTCTGACACTAGACTACC 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
10802R-1.in silico 241 TTGTGGAATCCCCAACGAGTTTCGAGCAGGATGCCGAAGTCCTTCTGACACTAGACTACC 300
10802R-1.IR_full 301 AAAGAAGACTGGATCACATGCAACAGCACTCAGGACAGCACCTGATCACCGCCCTGTTCG 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
10802R-1.in silico 301 AAAGAAGACTGGATCACATGCAACAGCACTCAGGACAGCACCTGATCACCGCCCTGTTCG 360
10802R-1.IR_full 361 ACAGGGAGTTCAAGTACGATNNCACCTCGTGGTCCCTGGGATCCACTGTCTCTTACATTC 420
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
10802R-1.in silico 361 ACAGGGAGTTCAAGTACGATACCACCTCGTGGTCCCTGGGATCCACTGTCTCTTACATTC 420
10802R-1.IR_full 421 AATTAAGTACGCCTCATTTGATAAGTCGCGAGTCATTGGACCTCATCGAACGTCAGGCCA 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
10802R-1.in silico 421 AATTAAGTACGCCTCATTTGATAAGTCGCGAGTCATTGGACCTCATCGAACGTCAGGCCA 480
10802R-1.IR_full 481 ACGATCTGATTCGCGAGGGCC 501
|||||||||||||||||||||
10802R-1.in silico 481 ACGATCTGATTCGCGAGGGCC 501
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| Off-target information (Last Update: November 4, 2007_NCBI RefSeq Release 26) |
Off-target search result
cv : coefficient of variation
(0 mm hits / total siRNA count)
mm : mismatch
|
| cv |
0mm |
1mm |
2mm |
3mm |
target transcript |
off target name |
| 100 |
482 |
0 |
0 |
0 |
NM_130706.2 |
CG10802-RA (CG10802), mRNA |
| 0 |
0 |
2 |
3 |
4 |
NM_142872.1 |
CG13829-RA (CG13829), mRNA |
| 0 |
0 |
2 |
2 |
5 |
NM_135772.1 |
CG9426-RA (CG9426), mRNA |
| 0 |
0 |
2 |
2 |
3 |
NM_132315.1 |
CG12120-RA (CG12120), mRNA |
| 0 |
0 |
1 |
4 |
9 |
NM_169609.1 |
CG31304-RA (CG31304), mRNA |
| 0 |
0 |
1 |
4 |
2 |
NM_141598.2 |
CG11977-RA (CG11977), mRNA |
| 0 |
0 |
1 |
2 |
6 |
NM_143530.2 |
CG2217-RA (CG2217), mRNA |
| 0 |
0 |
1 |
2 |
3 |
NM_143290.1 |
CG17991-RA (CG17991), mRNA |
| 0 |
0 |
1 |
2 |
3 |
NM_143665.2 |
CG2041-RA (lgs), mRNA |
| 0 |
0 |
1 |
2 |
2 |
NM_132417.1 |
CG12637-RA (CG12637), mRNA |
| 0 |
0 |
0 |
6 |
4 |
NM_001032055.1 |
CG17291-RB, transcript variant B (Pp2A-29B), mRNA |
| 0 |
0 |
0 |
6 |
4 |
NM_001032056.1 |
CG17291-RA, transcript variant A (Pp2A-29B), mRNA |
| 0 |
0 |
0 |
6 |
4 |
NM_140842.1 |
CG9629-RA (CG9629), mRNA |
| 0 |
0 |
0 |
5 |
6 |
NM_130604.2 |
CG17766-RA (CG17766), mRNA |
| 0 |
0 |
0 |
5 |
2 |
NM_079713.2 |
CG6376-RA, transcript variant A (E2f), mRNA |
| 0 |
0 |
0 |
5 |
2 |
NM_169961.1 |
CG6376-RB, transcript variant B (E2f), mRNA |
| 0 |
0 |
0 |
5 |
2 |
NM_169962.1 |
CG6376-RC, transcript variant C (E2f), mRNA |
| 0 |
0 |
0 |
4 |
8 |
NM_078592.2 |
CG11172-RA (NFAT), mRNA |
| 0 |
0 |
0 |
4 |
6 |
NM_001014586.2 |
CG4609-RD, transcript variant D (fax), mRNA |
| 0 |
0 |
0 |
4 |
6 |
NM_079382.5 |
CG4609-RA, transcript variant A (fax), mRNA |
| 0 |
0 |
0 |
4 |
6 |
NM_176336.3 |
CG4609-RB, transcript variant B (fax), mRNA |
| 0 |
0 |
0 |
4 |
6 |
NM_001014587.2 |
CG4609-RC, transcript variant C (fax), mRNA |
| 0 |
0 |
0 |
4 |
5 |
NM_166290.1 |
CG30120-RA (CG30120), mRNA |
| 0 |
0 |
0 |
4 |
3 |
NM_176368.1 |
CG6571-RD, transcript variant D (rdgC), mRNA |
| 0 |
0 |
0 |
4 |
3 |
NM_176367.1 |
CG6571-RC, transcript variant C (rdgC), mRNA |
| 0 |
0 |
0 |
4 |
3 |
NM_176366.1 |
CG6571-RB, transcript variant B (rdgC), mRNA |
| 0 |
0 |
0 |
4 |
2 |
NM_143689.1 |
CG11093-RA (CG11093), mRNA |
| 0 |
0 |
0 |
4 |
2 |
NM_079609.2 |
CG6019-RA (mus308), mRNA |
| 0 |
0 |
0 |
4 |
2 |
NM_134534.2 |
CG17052-RA (CG17052), mRNA |
| 0 |
0 |
0 |
3 |
6 |
NM_176118.1 |
CG2249-RB, transcript variant B (CG2249), mRNA |
|
| Wing Disc |
GFP
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Puc
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Caspase
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DAPI
 |
Merge
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Figure
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JNK signal
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Caspase-3 signal
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